RNA–Protein interactions for RNA: ENST00000474323.5

SAMM50-203, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 2,368 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-203ENST00000474323 FAM205CA6NFA0 338 aa16.06■□□□□ 0.16
SAMM50-203ENST00000474323 GOLGA6L10A6NI86 522 aa16.06■□□□□ 0.16
SAMM50-203ENST00000474323 MGRN1O60291 552 aa16.06■□□□□ 0.16
SAMM50-203ENST00000474323 GLI1P08151 1106 aa16.06■□□□□ 0.16
SAMM50-203ENST00000474323 ATP2C1P98194 919 aaPredicted RBP16.06■□□□□ 0.16
SAMM50-203ENST00000474323 WTAPQ15007 396 aa16.06■□□□□ 0.16
SAMM50-203ENST00000474323 RCSD1Q6JBY9 416 aa16.06■□□□□ 0.16
SAMM50-203ENST00000474323 FANCBQ8NB91 859 aa16.06■□□□□ 0.16
SAMM50-203ENST00000474323 TMBIM4Q9HC24 238 aa16.06■□□□□ 0.16
SAMM50-203ENST00000474323 INCENPQ9NQS7 918 aa16.06■□□□□ 0.16
SAMM50-203ENST00000474323 HAUS2Q9NVX0 235 aa16.06■□□□□ 0.16
SAMM50-203ENST00000474323 TSKSQ9UJT2 592 aa16.06■□□□□ 0.16
SAMM50-203ENST00000474323 TRIM49BA6NDI0 452 aa16.05■□□□□ 0.16
SAMM50-203ENST00000474323 B4DLN1 442 aa16.05■□□□□ 0.16
SAMM50-203ENST00000474323 TRAPPC3O43617 180 aa16.05■□□□□ 0.16
SAMM50-203ENST00000474323 MOCS3O95396 460 aa16.05■□□□□ 0.16
SAMM50-203ENST00000474323 ADRA2BP18089 450 aa16.05■□□□□ 0.16
SAMM50-203ENST00000474323 RXRBP28702 533 aa16.05■□□□□ 0.16
SAMM50-203ENST00000474323 TBC1D8BQ0IIM8 1120 aa16.05■□□□□ 0.16
SAMM50-203ENST00000474323 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.05■□□□□ 0.164e-8■■■■■ 36.3
SAMM50-203ENST00000474323 PHF20Q9BVI0 1012 aa16.05■□□□□ 0.16
SAMM50-203ENST00000474323 EPB41L5Q9HCM4 733 aa16.05■□□□□ 0.16
SAMM50-203ENST00000474323 ARAP2Q8WZ64 1704 aa16.05■□□□□ 0.16
SAMM50-203ENST00000474323 WTIPA6NIX2 430 aaPredicted RBP16.05■□□□□ 0.16
SAMM50-203ENST00000474323 HNRNPH3P31942 346 aaKnown RBP16.05■□□□□ 0.16
SAMM50-203ENST00000474323 CXCR5P32302 372 aa16.05■□□□□ 0.16
SAMM50-203ENST00000474323 GBP2P32456 591 aaPredicted RBP16.05■□□□□ 0.16
SAMM50-203ENST00000474323 SCTRP47872 440 aa16.05■□□□□ 0.16
SAMM50-203ENST00000474323 PPP2R5BQ15173 497 aa16.05■□□□□ 0.16
SAMM50-203ENST00000474323 EARS2Q5JPH6 523 aaKnown RBP16.05■□□□□ 0.16
SAMM50-203ENST00000474323 AKNAD1Q5T1N1 836 aa16.05■□□□□ 0.16
SAMM50-203ENST00000474323 LRIG3Q6UXM1 1119 aa16.05■□□□□ 0.16
SAMM50-203ENST00000474323 HOOK2Q96ED9 719 aa16.05■□□□□ 0.16
SAMM50-203ENST00000474323 RSRC1Q96IZ7 334 aaKnown RBP16.05■□□□□ 0.16
SAMM50-203ENST00000474323 ZNF512BQ96KM6 892 aaPredicted RBP16.05■□□□□ 0.16
SAMM50-203ENST00000474323 TUBGCP2Q9BSJ2 902 aa16.05■□□□□ 0.16
SAMM50-203ENST00000474323 MLXIPQ9HAP2 919 aa16.05■□□□□ 0.16
SAMM50-203ENST00000474323 BATF3Q9NR55 127 aa16.05■□□□□ 0.16
SAMM50-203ENST00000474323 ERICH2A1L162 156 aa16.04■□□□□ 0.16
SAMM50-203ENST00000474323 C5orf60A6NFR6 353 aa16.04■□□□□ 0.16
SAMM50-203ENST00000474323 DNAJC8O75937 253 aaPredicted RBP16.04■□□□□ 0.16
SAMM50-203ENST00000474323 HEXIM1O94992 359 aaKnown RBP16.04■□□□□ 0.16
SAMM50-203ENST00000474323 LCA5LO95447 670 aa16.04■□□□□ 0.16
SAMM50-203ENST00000474323 SSBP05455 408 aaKnown RBP eCLIP16.04■□□□□ 0.16
SAMM50-203ENST00000474323 ARID4AP29374 1257 aaPredicted RBP16.04■□□□□ 0.16
SAMM50-203ENST00000474323 GUCY2DQ02846 1103 aa16.04■□□□□ 0.16
SAMM50-203ENST00000474323 PTGDRQ13258 359 aa16.04■□□□□ 0.16
SAMM50-203ENST00000474323 SEMA3FQ13275 785 aa16.04■□□□□ 0.16
SAMM50-203ENST00000474323 ZNF174Q15697 407 aa16.04■□□□□ 0.16
SAMM50-203ENST00000474323 NAIF1Q69YI7 327 aaPredicted RBP16.04■□□□□ 0.16
SAMM50-203ENST00000474323 KRT26Q7Z3Y9 468 aa16.04■□□□□ 0.16
SAMM50-203ENST00000474323 CMTR1Q8N1G2 835 aaKnown RBP16.04■□□□□ 0.16
SAMM50-203ENST00000474323 IFT81Q8WYA0 676 aa16.04■□□□□ 0.16
SAMM50-203ENST00000474323 STRBPQ96SI9 672 aaKnown RBP16.04■□□□□ 0.16
SAMM50-203ENST00000474323 SMARCAL1Q9NZC9 954 aa16.04■□□□□ 0.16
SAMM50-203ENST00000474323 PLAGL2Q9UPG8 496 aa16.04■□□□□ 0.16
SAMM50-203ENST00000474323 MYH13Q9UKX3 1938 aa16.04■□□□□ 0.16
SAMM50-203ENST00000474323 APBA3O96018 575 aa16.04■□□□□ 0.16
SAMM50-203ENST00000474323 GHRP10912 638 aa16.04■□□□□ 0.16
SAMM50-203ENST00000474323 GYS1P13807 737 aa16.04■□□□□ 0.16
SAMM50-203ENST00000474323 IBSPP21815 317 aaPredicted RBP16.04■□□□□ 0.16
SAMM50-203ENST00000474323 BCAMP50895 628 aa16.04■□□□□ 0.16
SAMM50-203ENST00000474323 GRIK3Q13003 919 aa16.04■□□□□ 0.16
SAMM50-203ENST00000474323 E2F5Q15329 346 aa16.04■□□□□ 0.16
SAMM50-203ENST00000474323 CDC37Q16543 378 aaPredicted RBP16.04■□□□□ 0.16
SAMM50-203ENST00000474323 TTC38Q5R3I4 469 aa16.04■□□□□ 0.16
SAMM50-203ENST00000474323 MFSD6Q6ZSS7 791 aa16.04■□□□□ 0.16
SAMM50-203ENST00000474323 SEC16BQ96JE7 1060 aa16.04■□□□□ 0.16
SAMM50-203ENST00000474323 TRIM47Q96LD4 638 aa16.04■□□□□ 0.16
SAMM50-203ENST00000474323 BSDC1Q9NW68 430 aaPredicted RBP16.04■□□□□ 0.16
SAMM50-203ENST00000474323 MYH10P35580 1976 aa16.03■□□□□ 0.16
SAMM50-203ENST00000474323 PSMA7O14818 248 aa16.03■□□□□ 0.16
SAMM50-203ENST00000474323 UQCRFS1P1P0C7P4 283 aa16.03■□□□□ 0.16
SAMM50-203ENST00000474323 HSPA9P38646 679 aaKnown RBP16.03■□□□□ 0.16
SAMM50-203ENST00000474323 PMS1P54277 932 aaKnown RBP16.03■□□□□ 0.16
SAMM50-203ENST00000474323 KCNB1Q14721 858 aa16.03■□□□□ 0.16
SAMM50-203ENST00000474323 NAA25Q14CX7 972 aa16.03■□□□□ 0.16
SAMM50-203ENST00000474323 FKBP15Q5T1M5 1219 aa16.03■□□□□ 0.16
SAMM50-203ENST00000474323 MAATS1Q7Z4T9 603 aa16.03■□□□□ 0.16
SAMM50-203ENST00000474323 CACNA2D3Q8IZS8 1091 aa16.03■□□□□ 0.16
SAMM50-203ENST00000474323 EIF1ADQ8N9N8 165 aaKnown RBP16.03■□□□□ 0.16
SAMM50-203ENST00000474323 TLR10Q9BXR5 811 aa16.03■□□□□ 0.16
SAMM50-203ENST00000474323 NAPBQ9H115 298 aa16.03■□□□□ 0.16
SAMM50-203ENST00000474323 KDM4CQ9H3R0 1056 aa16.03■□□□□ 0.16
SAMM50-203ENST00000474323 SLC24A3Q9HC58 644 aa16.03■□□□□ 0.16
SAMM50-203ENST00000474323 PLCB1Q9NQ66 1216 aa16.03■□□□□ 0.16
SAMM50-203ENST00000474323 PIH1D3Q9NQM4 214 aaKnown RBP16.03■□□□□ 0.16
SAMM50-203ENST00000474323 EHD2Q9NZN4 543 aa16.03■□□□□ 0.16
SAMM50-203ENST00000474323 SLC12A6Q9UHW9 1150 aa16.03■□□□□ 0.16
SAMM50-203ENST00000474323 PLAAQ9Y263 795 aa16.03■□□□□ 0.16
SAMM50-203ENST00000474323 LEMD3Q9Y2U8 911 aa16.03■□□□□ 0.16
SAMM50-203ENST00000474323 ZNF532Q9HCE3 1301 aa16.03■□□□□ 0.16
SAMM50-203ENST00000474323 GCOM1H8Y6P7 765 aaPredicted RBP16.02■□□□□ 0.16
SAMM50-203ENST00000474323 IDH1O75874 414 aaKnown RBP16.02■□□□□ 0.16
SAMM50-203ENST00000474323 MYZAPP0CAP1 466 aa16.02■□□□□ 0.16
SAMM50-203ENST00000474323 RASGRF1Q13972 1273 aa16.02■□□□□ 0.16
SAMM50-203ENST00000474323 IFNL3Q8IZI9 196 aa16.02■□□□□ 0.16
SAMM50-203ENST00000474323 CNBD1Q8NA66 436 aa16.02■□□□□ 0.16
SAMM50-203ENST00000474323 RASSF8Q8NHQ8 419 aa16.02■□□□□ 0.16
SAMM50-203ENST00000474323 SHISA4Q96DD7 197 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms