RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 ABLIM1O14639 778 aa4.95□□□□□ -1.62
ECHDC1-213ENST00000474240 MYO1BO43795 1136 aa4.95□□□□□ -1.62
ECHDC1-213ENST00000474240 BUB1BO60566 1050 aaPredicted RBP4.95□□□□□ -1.62
ECHDC1-213ENST00000474240 VAMP4O75379 141 aa4.95□□□□□ -1.62
ECHDC1-213ENST00000474240 NAT1P18440 290 aa4.95□□□□□ -1.62
ECHDC1-213ENST00000474240 GFRA1P56159 465 aa4.95□□□□□ -1.62
ECHDC1-213ENST00000474240 SCRN1Q12765 414 aa4.95□□□□□ -1.62
ECHDC1-213ENST00000474240 DPY19L1Q2PZI1 675 aa4.95□□□□□ -1.62
ECHDC1-213ENST00000474240 NT5DC1Q5TFE4 455 aa4.95□□□□□ -1.62
ECHDC1-213ENST00000474240 NOP9Q86U38 636 aaKnown RBP4.95□□□□□ -1.62
ECHDC1-213ENST00000474240 CABP7Q86V35 215 aa4.95□□□□□ -1.62
ECHDC1-213ENST00000474240 ADGRG2Q8IZP9 1017 aa4.95□□□□□ -1.62
ECHDC1-213ENST00000474240 ZBTB38Q8NAP3 1195 aaPredicted RBP4.95□□□□□ -1.62
ECHDC1-213ENST00000474240 ZSWIM2Q8NEG5 633 aa4.95□□□□□ -1.62
ECHDC1-213ENST00000474240 NLGN2Q8NFZ4 835 aa4.95□□□□□ -1.62
ECHDC1-213ENST00000474240 THAP3Q8WTV1 239 aaPredicted RBP4.95□□□□□ -1.62
ECHDC1-213ENST00000474240 BTN2A2Q8WVV5 523 aa4.95□□□□□ -1.62
ECHDC1-213ENST00000474240 PLCD4Q9BRC7 762 aa4.95□□□□□ -1.62
ECHDC1-213ENST00000474240 SMPD4Q9NXE4 827 aa4.95□□□□□ -1.62
ECHDC1-213ENST00000474240 KLHL14Q9P2G3 628 aa4.95□□□□□ -1.62
ECHDC1-213ENST00000474240 A0A1B0GTL3 188 aa4.94□□□□□ -1.62
ECHDC1-213ENST00000474240 MEFVO15553 781 aaPredicted RBP4.94□□□□□ -1.62
ECHDC1-213ENST00000474240 NPHS1O60500 1241 aa4.94□□□□□ -1.62
ECHDC1-213ENST00000474240 PNLIPP16233 465 aa4.94□□□□□ -1.62
ECHDC1-213ENST00000474240 KCNJ6P48051 423 aa4.94□□□□□ -1.62
ECHDC1-213ENST00000474240 ERVFRD-1P60508 538 aa4.94□□□□□ -1.62
ECHDC1-213ENST00000474240 KIR3DS1Q14943 382 aa4.94□□□□□ -1.62
ECHDC1-213ENST00000474240 CCDC144BQ3MJ40 725 aa4.94□□□□□ -1.62
ECHDC1-213ENST00000474240 HSF5Q4G112 596 aaPredicted RBP4.94□□□□□ -1.62
ECHDC1-213ENST00000474240 RSPO2Q6UXX9 243 aaPredicted RBP4.94□□□□□ -1.62
ECHDC1-213ENST00000474240 SCUBE1Q8IWY4 988 aa4.94□□□□□ -1.62
ECHDC1-213ENST00000474240 JMYQ8N9B5 988 aa4.94□□□□□ -1.62
ECHDC1-213ENST00000474240 ZFYVE21Q9BQ24 234 aa4.94□□□□□ -1.62
ECHDC1-213ENST00000474240 SPATA25Q9BR10 227 aa4.94□□□□□ -1.62
ECHDC1-213ENST00000474240 ACSL6Q9UKU0 697 aa4.94□□□□□ -1.62
ECHDC1-213ENST00000474240 A0A1W2PQJ5 194 aa4.93□□□□□ -1.62
ECHDC1-213ENST00000474240 NUDT19A8MXV4 375 aa4.93□□□□□ -1.62
ECHDC1-213ENST00000474240 CAPNS1P04632 268 aa4.93□□□□□ -1.62
ECHDC1-213ENST00000474240 LTBRP36941 435 aa4.93□□□□□ -1.62
ECHDC1-213ENST00000474240 SUMO1P63165 101 aaKnown RBP4.93□□□□□ -1.62
ECHDC1-213ENST00000474240 BMS1Q14692 1282 aaKnown RBP4.93□□□□□ -1.62
ECHDC1-213ENST00000474240 C2orf27AQ580R0 203 aa4.93□□□□□ -1.62
ECHDC1-213ENST00000474240 NSMFQ6X4W1 530 aa4.93□□□□□ -1.62
ECHDC1-213ENST00000474240 SYNPOQ8N3V7 929 aa4.93□□□□□ -1.62
ECHDC1-213ENST00000474240 NPLOC4Q8TAT6 608 aa4.93□□□□□ -1.62
ECHDC1-213ENST00000474240 CDC6Q99741 560 aa4.93□□□□□ -1.62
ECHDC1-213ENST00000474240 IER2Q9BTL4 223 aa4.93□□□□□ -1.62
ECHDC1-213ENST00000474240 KRTAP3-1Q9BYR8 98 aa4.93□□□□□ -1.62
ECHDC1-213ENST00000474240 PDLIM7Q9NR12 457 aa4.93□□□□□ -1.62
ECHDC1-213ENST00000474240 ARHGEF4Q9NR80 690 aa4.93□□□□□ -1.62
ECHDC1-213ENST00000474240 KDM2BQ8NHM5 1336 aa4.93□□□□□ -1.62
ECHDC1-213ENST00000474240 SLPIP03973 132 aa4.92□□□□□ -1.62
ECHDC1-213ENST00000474240 MPOP05164 745 aa4.92□□□□□ -1.62
ECHDC1-213ENST00000474240 THBDP07204 575 aa4.92□□□□□ -1.62
ECHDC1-213ENST00000474240 PABPC1P11940 636 aaKnown RBP4.92□□□□□ -1.62
ECHDC1-213ENST00000474240 C6P13671 934 aa4.92□□□□□ -1.62
ECHDC1-213ENST00000474240 PLS3P13797 630 aa4.92□□□□□ -1.62
ECHDC1-213ENST00000474240 CNR2P34972 360 aa4.92□□□□□ -1.62
ECHDC1-213ENST00000474240 CYP4F8P98187 520 aa4.92□□□□□ -1.62
ECHDC1-213ENST00000474240 RAB3GAP1Q15042 981 aa4.92□□□□□ -1.62
ECHDC1-213ENST00000474240 VWA3BQ502W6 1294 aa4.92□□□□□ -1.62
ECHDC1-213ENST00000474240 SLC35F1Q5T1Q4 408 aa4.92□□□□□ -1.62
ECHDC1-213ENST00000474240 ZPBP2Q6X784 338 aa4.92□□□□□ -1.62
ECHDC1-213ENST00000474240 SPATC1Q76KD6 591 aa4.92□□□□□ -1.62
ECHDC1-213ENST00000474240 MAMDC2Q7Z304 686 aaPredicted RBP4.92□□□□□ -1.62
ECHDC1-213ENST00000474240 PPIL6Q8IXY8 311 aa4.92□□□□□ -1.62
ECHDC1-213ENST00000474240 NUP43Q8NFH3 380 aa4.92□□□□□ -1.62
ECHDC1-213ENST00000474240 DCAF4Q8WV16 495 aa4.92□□□□□ -1.62
ECHDC1-213ENST00000474240 DIO2Q92813 273 aa4.92□□□□□ -1.62
ECHDC1-213ENST00000474240 DNAJC7Q99615 494 aa4.92□□□□□ -1.62
ECHDC1-213ENST00000474240 MCMBPQ9BTE3 642 aa4.92□□□□□ -1.62
ECHDC1-213ENST00000474240 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.92□□□□□ -1.62
ECHDC1-213ENST00000474240 TRBV23-1A0A0A0MS06 115 aa4.91□□□□□ -1.62
ECHDC1-213ENST00000474240 FAM221BA6H8Z2 402 aa4.91□□□□□ -1.62
ECHDC1-213ENST00000474240 SRGAP3O43295 1099 aa4.91□□□□□ -1.62
ECHDC1-213ENST00000474240 TBX1O43435 398 aa4.91□□□□□ -1.62
ECHDC1-213ENST00000474240 ADCY3O60266 1144 aa4.91□□□□□ -1.62
ECHDC1-213ENST00000474240 PRKCAP17252 672 aa4.91□□□□□ -1.62
ECHDC1-213ENST00000474240 ECI1P42126 302 aa4.91□□□□□ -1.62
ECHDC1-213ENST00000474240 RPL11P62913 178 aaKnown RBP4.91□□□□□ -1.62
ECHDC1-213ENST00000474240 NR1I3Q14994 352 aa4.91□□□□□ -1.62
ECHDC1-213ENST00000474240 TAF7LQ5H9L4 462 aa4.91□□□□□ -1.62
ECHDC1-213ENST00000474240 CRB2Q5IJ48 1285 aa4.91□□□□□ -1.62
ECHDC1-213ENST00000474240 LIPIQ6XZB0 460 aa4.91□□□□□ -1.62
ECHDC1-213ENST00000474240 TMEM145Q8NBT3 493 aa4.91□□□□□ -1.62
ECHDC1-213ENST00000474240 TMEM52Q8NDY8 209 aa4.91□□□□□ -1.62
ECHDC1-213ENST00000474240 FRS2Q8WU20 508 aa4.91□□□□□ -1.62
ECHDC1-213ENST00000474240 JMJD8Q96S16 334 aa4.91□□□□□ -1.62
ECHDC1-213ENST00000474240 MRIQ9BWK5 157 aa4.91□□□□□ -1.62
ECHDC1-213ENST00000474240 GPR27Q9NS67 375 aa4.91□□□□□ -1.62
ECHDC1-213ENST00000474240 CLEC1BQ9P126 229 aa4.91□□□□□ -1.62
ECHDC1-213ENST00000474240 IMPACTQ9P2X3 320 aa4.91□□□□□ -1.62
ECHDC1-213ENST00000474240 PFDN2Q9UHV9 154 aa4.91□□□□□ -1.62
ECHDC1-213ENST00000474240 NUDT5Q9UKK9 219 aa4.91□□□□□ -1.62
ECHDC1-213ENST00000474240 NPFFR2Q9Y5X5 522 aa4.91□□□□□ -1.62
ECHDC1-213ENST00000474240 DUSP10Q9Y6W6 482 aa4.91□□□□□ -1.62
ECHDC1-213ENST00000474240 AQP7O14520 342 aa4.9□□□□□ -1.63
ECHDC1-213ENST00000474240 PRODHO43272 600 aa4.9□□□□□ -1.63
ECHDC1-213ENST00000474240 EFCAB14O75071 495 aa4.9□□□□□ -1.63
ECHDC1-213ENST00000474240 ZNF20P17024 532 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms