RNA–Protein interactions for RNA: ENST00000474228.1

SPRED2-208, Transcript of sprouty related EVH1 domain containing 2, humanhuman

TSL 3

Gene SPRED2, Length 876 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED2-208ENST00000474228 CXCL10P02778 98 aa11.79□□□□□ -0.52
SPRED2-208ENST00000474228 SLC3A2P08195 630 aaKnown RBP11.79□□□□□ -0.52
SPRED2-208ENST00000474228 SELPP16109 830 aa11.79□□□□□ -0.52
SPRED2-208ENST00000474228 ERVK-21P61565 698 aa11.79□□□□□ -0.52
SPRED2-208ENST00000474228 ZNF618Q5T7W0 954 aa11.79□□□□□ -0.52
SPRED2-208ENST00000474228 ZNF589Q86UQ0 364 aaPredicted RBP11.79□□□□□ -0.52
SPRED2-208ENST00000474228 TBC1D10CQ8IV04 446 aa11.79□□□□□ -0.52
SPRED2-208ENST00000474228 FAM178BQ8IXR5 827 aa11.79□□□□□ -0.52
SPRED2-208ENST00000474228 GJD3Q8N144 294 aa11.79□□□□□ -0.52
SPRED2-208ENST00000474228 GPATCH3Q96I76 525 aa11.79□□□□□ -0.52
SPRED2-208ENST00000474228 PCDHB15Q9Y5E8 787 aa11.79□□□□□ -0.52
SPRED2-208ENST00000474228 ORC4O43929 436 aa11.78□□□□□ -0.52
SPRED2-208ENST00000474228 LGR5O75473 907 aa11.78□□□□□ -0.52
SPRED2-208ENST00000474228 TOP1P11387 765 aaKnown RBP11.78□□□□□ -0.52
SPRED2-208ENST00000474228 SSTR3P32745 418 aaPredicted RBP11.78□□□□□ -0.52
SPRED2-208ENST00000474228 PSEN2P49810 448 aa11.78□□□□□ -0.52
SPRED2-208ENST00000474228 ZNF543Q08ER8 600 aa11.78□□□□□ -0.52
SPRED2-208ENST00000474228 LEXMQ3ZCV2 418 aa11.78□□□□□ -0.52
SPRED2-208ENST00000474228 PTCRAQ6ISU1 281 aaPredicted RBP11.78□□□□□ -0.52
SPRED2-208ENST00000474228 CNKSR3Q6P9H4 555 aa11.78□□□□□ -0.52
SPRED2-208ENST00000474228 SYTL5Q8TDW5 730 aaPredicted RBP11.78□□□□□ -0.52
SPRED2-208ENST00000474228 AFAP1L1Q8TED9 768 aa11.78□□□□□ -0.52
SPRED2-208ENST00000474228 GPKOWQ92917 476 aaPredicted RBP eCLIP11.78□□□□□ -0.52
SPRED2-208ENST00000474228 TGS1Q96RS0 853 aaKnown RBP11.78□□□□□ -0.52
SPRED2-208ENST00000474228 PHOX2BQ99453 314 aa11.78□□□□□ -0.52
SPRED2-208ENST00000474228 CHMP4BQ9H444 224 aaKnown RBP11.78□□□□□ -0.52
SPRED2-208ENST00000474228 BCAS3Q9H6U6 928 aa11.78□□□□□ -0.52
SPRED2-208ENST00000474228 GTF2IRD1Q9UHL9 959 aa11.78□□□□□ -0.52
SPRED2-208ENST00000474228 ANAPC4Q9UJX5 808 aa11.78□□□□□ -0.52
SPRED2-208ENST00000474228 NEDD4P46934 1319 aa11.78□□□□□ -0.52
SPRED2-208ENST00000474228 ATG2AQ2TAZ0 1938 aa11.78□□□□□ -0.52
SPRED2-208ENST00000474228 NKRFO15226 690 aaKnown RBP eCLIP11.77□□□□□ -0.53
SPRED2-208ENST00000474228 FGRP09769 529 aa11.77□□□□□ -0.53
SPRED2-208ENST00000474228 EIF2AK2P19525 551 aaKnown RBP11.77□□□□□ -0.53
SPRED2-208ENST00000474228 PTPN11Q06124 597 aaPredicted RBP11.77□□□□□ -0.53
SPRED2-208ENST00000474228 MKRN4PQ13434 485 aaPredicted RBP11.77□□□□□ -0.53
SPRED2-208ENST00000474228 MYOCDQ8IZQ8 938 aa11.77□□□□□ -0.53
SPRED2-208ENST00000474228 CAGE1Q8TC20 777 aa11.77□□□□□ -0.53
SPRED2-208ENST00000474228 RAD9AQ99638 391 aa11.77□□□□□ -0.53
SPRED2-208ENST00000474228 TELO2Q9Y4R8 837 aa11.77□□□□□ -0.53
SPRED2-208ENST00000474228 RAD50Q92878 1312 aa11.77□□□□□ -0.53
SPRED2-208ENST00000474228 SALL3Q9BXA9 1300 aa11.77□□□□□ -0.53
SPRED2-208ENST00000474228 TRIOO75962 3097 aa11.76□□□□□ -0.53
SPRED2-208ENST00000474228 GH1P01241 217 aa11.76□□□□□ -0.53
SPRED2-208ENST00000474228 FGAP02671 866 aa11.76□□□□□ -0.53
SPRED2-208ENST00000474228 SNHG28P0DPA3 235 aa11.76□□□□□ -0.53
SPRED2-208ENST00000474228 MRE11P49959 708 aa11.76□□□□□ -0.53
SPRED2-208ENST00000474228 MFSD10Q14728 455 aa11.76□□□□□ -0.53
SPRED2-208ENST00000474228 CLUL1Q15846 466 aa11.76□□□□□ -0.53
SPRED2-208ENST00000474228 CDC37Q16543 378 aaPredicted RBP11.76□□□□□ -0.53
SPRED2-208ENST00000474228 TCEAL5Q5H9L2 206 aa11.76□□□□□ -0.53
SPRED2-208ENST00000474228 EP400NLQ6ZTU2 488 aa11.76□□□□□ -0.53
SPRED2-208ENST00000474228 SESTD1Q86VW0 696 aa11.76□□□□□ -0.53
SPRED2-208ENST00000474228 FBXO22Q8NEZ5 403 aa11.76□□□□□ -0.53
SPRED2-208ENST00000474228 DBF4BQ8NFT6 615 aa11.76□□□□□ -0.53
SPRED2-208ENST00000474228 IL31RAQ8NI17 732 aa11.76□□□□□ -0.53
SPRED2-208ENST00000474228 FBXL18Q96ME1 805 aa11.76□□□□□ -0.53
SPRED2-208ENST00000474228 TTC41PQ6P2S7 1318 aa11.76□□□□□ -0.53
SPRED2-208ENST00000474228 GRXCR2A6NFK2 248 aa11.75□□□□□ -0.53
SPRED2-208ENST00000474228 OPLAHO14841 1288 aa11.75□□□□□ -0.53
SPRED2-208ENST00000474228 KPNA6O60684 536 aa11.75□□□□□ -0.53
SPRED2-208ENST00000474228 RGS20O76081 388 aa11.75□□□□□ -0.53
SPRED2-208ENST00000474228 MX1P20591 662 aa11.75□□□□□ -0.53
SPRED2-208ENST00000474228 DLX2Q07687 328 aaPredicted RBP11.75□□□□□ -0.53
SPRED2-208ENST00000474228 RBL2Q08999 1139 aa11.75□□□□□ -0.53
SPRED2-208ENST00000474228 KIAA0753Q2KHM9 967 aa11.75□□□□□ -0.53
SPRED2-208ENST00000474228 LRRFIP1Q32MZ4 808 aaKnown RBP11.75□□□□□ -0.53
SPRED2-208ENST00000474228 BRDTQ58F21 947 aaPredicted RBP11.75□□□□□ -0.53
SPRED2-208ENST00000474228 DNERQ8NFT8 737 aa11.75□□□□□ -0.53
SPRED2-208ENST00000474228 CRBNQ96SW2 442 aa11.75□□□□□ -0.53
SPRED2-208ENST00000474228 DDX41Q9UJV9 622 aaKnown RBP11.75□□□□□ -0.53
SPRED2-208ENST00000474228 ARIH1Q9Y4X5 557 aaPredicted RBP11.75□□□□□ -0.53
SPRED2-208ENST00000474228 WDR19Q8NEZ3 1342 aa11.75□□□□□ -0.53
SPRED2-208ENST00000474228 MICAL3Q7RTP6 2002 aa11.75□□□□□ -0.53
SPRED2-208ENST00000474228 USP34Q70CQ2 3546 aa11.74□□□□□ -0.53
SPRED2-208ENST00000474228 KIAA1217Q5T5P2 1943 aa11.74□□□□□ -0.53
SPRED2-208ENST00000474228 LOC102724159A0A0B4J2E5 919 aa11.74□□□□□ -0.53
SPRED2-208ENST00000474228 PRR33A8MZF0 331 aa11.74□□□□□ -0.53
SPRED2-208ENST00000474228 HAS3O00219 553 aa11.74□□□□□ -0.53
SPRED2-208ENST00000474228 UPP2O95045 317 aa11.74□□□□□ -0.53
SPRED2-208ENST00000474228 F2P00734 622 aa11.74□□□□□ -0.53
SPRED2-208ENST00000474228 CTSHP09668 335 aa11.74□□□□□ -0.53
SPRED2-208ENST00000474228 HSPD1P10809 573 aaKnown RBP11.74□□□□□ -0.53
SPRED2-208ENST00000474228 GTF2F1P35269 517 aaKnown RBP eCLIP11.74□□□□□ -0.53
SPRED2-208ENST00000474228 SP2Q02086 613 aa11.74□□□□□ -0.53
SPRED2-208ENST00000474228 NHLH1Q02575 133 aa11.74□□□□□ -0.53
SPRED2-208ENST00000474228 NMIQ13287 307 aaPredicted RBP11.74□□□□□ -0.53
SPRED2-208ENST00000474228 PWP2Q15269 919 aaKnown RBP11.74□□□□□ -0.53
SPRED2-208ENST00000474228 QRICH1Q2TAL8 776 aa11.74□□□□□ -0.53
SPRED2-208ENST00000474228 EPC2Q52LR7 807 aa11.74□□□□□ -0.53
SPRED2-208ENST00000474228 C7orf31Q8N865 590 aa11.74□□□□□ -0.53
SPRED2-208ENST00000474228 NEK9Q8TD19 979 aa11.74□□□□□ -0.53
SPRED2-208ENST00000474228 VAT1LQ9HCJ6 419 aa11.74□□□□□ -0.53
SPRED2-208ENST00000474228 LMCD1Q9NZU5 365 aa11.74□□□□□ -0.53
SPRED2-208ENST00000474228 ABHD14A-ACY1A0A1B0GW23 586 aa11.73□□□□□ -0.53
SPRED2-208ENST00000474228 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.73□□□□□ -0.53
SPRED2-208ENST00000474228 PPP1R11O60927 126 aaPredicted RBP11.73□□□□□ -0.53
SPRED2-208ENST00000474228 CASTP20810 708 aaKnown RBP11.73□□□□□ -0.53
SPRED2-208ENST00000474228 THPOP40225 353 aa11.73□□□□□ -0.53
SPRED2-208ENST00000474228 HTRA4P83105 476 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms