RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 ZNF713Q8N859 430 aaPredicted RBP23.61■■□□□ 1.37
SNX13-206ENST00000474067 EMID1Q96A84 441 aaPredicted RBP23.61■■□□□ 1.37
SNX13-206ENST00000474067 MTIF3Q9H2K0 278 aaKnown RBP23.61■■□□□ 1.37
SNX13-206ENST00000474067 HOXA13P31271 388 aaPredicted RBP23.6■■□□□ 1.37
SNX13-206ENST00000474067 BLOC1S2Q6QNY1 142 aa23.6■■□□□ 1.37
SNX13-206ENST00000474067 TMTC3Q6ZXV5 915 aa23.6■■□□□ 1.37
SNX13-206ENST00000474067 VSIG10LQ86VR7 867 aa23.6■■□□□ 1.37
SNX13-206ENST00000474067 SKAP1Q86WV1 359 aa23.6■■□□□ 1.37
SNX13-206ENST00000474067 DHX37Q8IY37 1157 aaKnown RBP23.6■■□□□ 1.37
SNX13-206ENST00000474067 KIAA1217Q5T5P2 1943 aa23.6■■□□□ 1.37
SNX13-206ENST00000474067 HSPA4P34932 840 aa23.59■■□□□ 1.37
SNX13-206ENST00000474067 EXOSC10Q01780 885 aaKnown RBP23.59■■□□□ 1.37
SNX13-206ENST00000474067 RTN1Q16799 776 aa23.59■■□□□ 1.37
SNX13-206ENST00000474067 PSRC1Q6PGN9 363 aaPredicted RBP23.59■■□□□ 1.37
SNX13-206ENST00000474067 SRBD1Q8N5C6 995 aaKnown RBP23.59■■□□□ 1.37
SNX13-206ENST00000474067 PIBF1Q8WXW3 757 aa23.59■■□□□ 1.37
SNX13-206ENST00000474067 GLT8D2Q9H1C3 349 aa23.59■■□□□ 1.37
SNX13-206ENST00000474067 HIPK3Q9H422 1215 aa23.59■■□□□ 1.37
SNX13-206ENST00000474067 DDX41Q9UJV9 622 aaKnown RBP23.59■■□□□ 1.37
SNX13-206ENST00000474067 CCDC155Q8N6L0 562 aa23.58■■□□□ 1.37
SNX13-206ENST00000474067 PPTC7Q8NI37 304 aa23.58■■□□□ 1.37
SNX13-206ENST00000474067 RNPC3Q96LT9 517 aaKnown RBP23.58■■□□□ 1.37
SNX13-206ENST00000474067 LRRC2Q9BYS8 371 aa23.58■■□□□ 1.37
SNX13-206ENST00000474067 ALDH8A1Q9H2A2 487 aaPredicted RBP23.58■■□□□ 1.37
SNX13-206ENST00000474067 PSTPIP2Q9H939 334 aa23.58■■□□□ 1.37
SNX13-206ENST00000474067 NOD1Q9Y239 953 aa23.58■■□□□ 1.37
SNX13-206ENST00000474067 PLEKHA8P1O95397 391 aa23.57■■□□□ 1.36
SNX13-206ENST00000474067 MMP3P08254 477 aa23.57■■□□□ 1.36
SNX13-206ENST00000474067 SHHQ15465 462 aa23.57■■□□□ 1.36
SNX13-206ENST00000474067 LY6KQ17RY6 165 aa23.57■■□□□ 1.36
SNX13-206ENST00000474067 SLC35G1Q2M3R5 365 aa23.57■■□□□ 1.36
SNX13-206ENST00000474067 FAM47CQ5HY64 1035 aa23.57■■□□□ 1.36
SNX13-206ENST00000474067 PPP1R18Q6NYC8 613 aa23.57■■□□□ 1.36
SNX13-206ENST00000474067 NLRX1Q86UT6 975 aa23.57■■□□□ 1.36
SNX13-206ENST00000474067 RPUSD2Q8IZ73 545 aaKnown RBP23.57■■□□□ 1.36
SNX13-206ENST00000474067 KCNB2Q92953 911 aa23.57■■□□□ 1.36
SNX13-206ENST00000474067 CDHR1Q96JP9 859 aa23.57■■□□□ 1.36
SNX13-206ENST00000474067 FRMPD4Q14CM0 1322 aa23.57■■□□□ 1.36
SNX13-206ENST00000474067 SPDYE3A6NKU9 549 aa23.56■■□□□ 1.36
SNX13-206ENST00000474067 ARIH2O95376 493 aa23.56■■□□□ 1.36
SNX13-206ENST00000474067 RXRAP19793 462 aa23.56■■□□□ 1.36
SNX13-206ENST00000474067 PSMC6P62333 389 aa23.56■■□□□ 1.36
SNX13-206ENST00000474067 ARHGAP1Q07960 439 aa23.56■■□□□ 1.36
SNX13-206ENST00000474067 NEDD9Q14511 834 aa23.56■■□□□ 1.36
SNX13-206ENST00000474067 TMEM63BQ5T3F8 832 aa23.56■■□□□ 1.36
SNX13-206ENST00000474067 GIMAP8Q8ND71 665 aaPredicted RBP23.56■■□□□ 1.36
SNX13-206ENST00000474067 AFG1LQ8WV93 481 aa23.56■■□□□ 1.36
SNX13-206ENST00000474067 COPS5Q92905 334 aa23.56■■□□□ 1.36
SNX13-206ENST00000474067 LRCH3Q96II8 777 aa23.56■■□□□ 1.36
SNX13-206ENST00000474067 JAKMIP1Q96N16 626 aaKnown RBP23.56■■□□□ 1.36
SNX13-206ENST00000474067 PPP1R12CQ9BZL4 782 aa23.56■■□□□ 1.36
SNX13-206ENST00000474067 MLXIPQ9HAP2 919 aa23.56■■□□□ 1.36
SNX13-206ENST00000474067 KLF18A0A0U1RQI7 1052 aa23.55■■□□□ 1.36
SNX13-206ENST00000474067 GOLGA8AA7E2F4 631 aa23.55■■□□□ 1.36
SNX13-206ENST00000474067 GOLGA8BA8MQT2 603 aa23.55■■□□□ 1.36
SNX13-206ENST00000474067 SOX1O00570 391 aaPredicted RBP23.55■■□□□ 1.36
SNX13-206ENST00000474067 FIBPO43427 364 aa23.55■■□□□ 1.36
SNX13-206ENST00000474067 B4GALT4O60513 344 aa23.55■■□□□ 1.36
SNX13-206ENST00000474067 PPFIA4O75335 1185 aa23.55■■□□□ 1.36
SNX13-206ENST00000474067 PFKMP08237 780 aa23.55■■□□□ 1.36
SNX13-206ENST00000474067 SMAD3P84022 425 aaKnown RBP23.55■■□□□ 1.36
SNX13-206ENST00000474067 ADCK5Q3MIX3 580 aa23.55■■□□□ 1.36
SNX13-206ENST00000474067 PCNX4Q63HM2 1172 aa23.55■■□□□ 1.36
SNX13-206ENST00000474067 FAM109BQ6ICB4 259 aaPredicted RBP23.55■■□□□ 1.36
SNX13-206ENST00000474067 RASEFQ8IZ41 740 aa23.55■■□□□ 1.36
SNX13-206ENST00000474067 NAP1L2Q9ULW6 460 aaPredicted RBP23.55■■□□□ 1.36
SNX13-206ENST00000474067 BAZ2BQ9UIF8 2168 aaKnown RBP23.55■■□□□ 1.36
SNX13-206ENST00000474067 BFSP2Q13515 415 aa23.54■■□□□ 1.36
SNX13-206ENST00000474067 NBPF20Q3BBV1 942 aa23.54■■□□□ 1.36
SNX13-206ENST00000474067 HEATR3Q7Z4Q2 680 aa23.54■■□□□ 1.36
SNX13-206ENST00000474067 FBXL16Q8N461 479 aa23.54■■□□□ 1.36
SNX13-206ENST00000474067 GRIN2DO15399 1336 aa23.54■■□□□ 1.36
SNX13-206ENST00000474067 NOP56O00567 594 aaKnown RBP23.53■■□□□ 1.36
SNX13-206ENST00000474067 ITGB8P26012 769 aa23.53■■□□□ 1.36
SNX13-206ENST00000474067 ICAM3P32942 547 aa23.53■■□□□ 1.36
SNX13-206ENST00000474067 METAP2P50579 478 aaKnown RBP eCLIP23.53■■□□□ 1.36
SNX13-206ENST00000474067 CELF3Q5SZQ8 465 aaKnown RBP23.53■■□□□ 1.36
SNX13-206ENST00000474067 ZNF697Q5TEC3 545 aa23.53■■□□□ 1.36
SNX13-206ENST00000474067 SESTD1Q86VW0 696 aa23.53■■□□□ 1.36
SNX13-206ENST00000474067 CCDC82Q8N4S0 544 aa23.53■■□□□ 1.36
SNX13-206ENST00000474067 RETREG2Q8NC44 543 aa23.53■■□□□ 1.36
SNX13-206ENST00000474067 CCDC12Q8WUD4 166 aaPredicted RBP23.53■■□□□ 1.36
SNX13-206ENST00000474067 SPATA33Q96N06 139 aa23.53■■□□□ 1.36
SNX13-206ENST00000474067 INPP4AQ96PE3 977 aaPredicted RBP23.53■■□□□ 1.36
SNX13-206ENST00000474067 TMEM265A0A087WTH1 108 aa23.52■■□□□ 1.36
SNX13-206ENST00000474067 PITPNM1O00562 1244 aa23.52■■□□□ 1.36
SNX13-206ENST00000474067 GGPS1O95749 300 aa23.52■■□□□ 1.36
SNX13-206ENST00000474067 FOSP01100 380 aaPredicted RBP23.52■■□□□ 1.36
SNX13-206ENST00000474067 RFC2P35250 354 aa23.52■■□□□ 1.36
SNX13-206ENST00000474067 MCTP2Q6DN12 878 aa23.52■■□□□ 1.36
SNX13-206ENST00000474067 DEFB123Q8N688 67 aa23.52■■□□□ 1.36
SNX13-206ENST00000474067 C7orf31Q8N865 590 aa23.52■■□□□ 1.36
SNX13-206ENST00000474067 TRPV6Q9H1D0 765 aa23.52■■□□□ 1.36
SNX13-206ENST00000474067 IL23AQ9NPF7 189 aa23.52■■□□□ 1.36
SNX13-206ENST00000474067 SNX14Q9Y5W7 946 aa23.52■■□□□ 1.36
SNX13-206ENST00000474067 SCN10AQ9Y5Y9 1956 aa23.52■■□□□ 1.36
SNX13-206ENST00000474067 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.51■■□□□ 1.35
SNX13-206ENST00000474067 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.51■■□□□ 1.35
SNX13-206ENST00000474067 MEIS2O14770 477 aa23.51■■□□□ 1.35
SNX13-206ENST00000474067 MAFGO15525 162 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms