RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 KCNA1Q09470 495 aa3.96□□□□□ -1.78
CCDC39-203ENST00000473854 HNRNPA0Q13151 305 aaKnown RBP3.96□□□□□ -1.78
CCDC39-203ENST00000473854 AXDND1Q5T1B0 1012 aaPredicted RBP3.96□□□□□ -1.78
CCDC39-203ENST00000473854 TDRD10Q5VZ19 366 aaKnown RBP3.96□□□□□ -1.78
CCDC39-203ENST00000473854 ERMP1Q7Z2K6 904 aa3.96□□□□□ -1.78
CCDC39-203ENST00000473854 FAM26EQ8N5C1 309 aa3.96□□□□□ -1.78
CCDC39-203ENST00000473854 MEGF9Q9H1U4 602 aa3.96□□□□□ -1.78
CCDC39-203ENST00000473854 WHRNQ9P202 907 aa3.96□□□□□ -1.78
CCDC39-203ENST00000473854 IVNS1ABPQ9Y6Y0 642 aa3.96□□□□□ -1.78
CCDC39-203ENST00000473854 FUCA1P04066 466 aa3.95□□□□□ -1.78
CCDC39-203ENST00000473854 LMO1P25800 156 aa3.95□□□□□ -1.78
CCDC39-203ENST00000473854 CRKP46108 304 aa3.95□□□□□ -1.78
CCDC39-203ENST00000473854 NFATC3Q12968 1075 aa3.95□□□□□ -1.78
CCDC39-203ENST00000473854 ADAM9Q13443 819 aa3.95□□□□□ -1.78
CCDC39-203ENST00000473854 LSM12Q3MHD2 195 aaKnown RBP3.95□□□□□ -1.78
CCDC39-203ENST00000473854 STK32CQ86UX6 486 aa3.95□□□□□ -1.78
CCDC39-203ENST00000473854 ZNF296Q8WUU4 475 aaPredicted RBP3.95□□□□□ -1.78
CCDC39-203ENST00000473854 EDAQ92838 391 aa3.95□□□□□ -1.78
CCDC39-203ENST00000473854 TMEM209Q96SK2 561 aa3.95□□□□□ -1.78
CCDC39-203ENST00000473854 ADOQ96SZ5 270 aa3.95□□□□□ -1.78
CCDC39-203ENST00000473854 TM9SF2Q99805 663 aa3.95□□□□□ -1.78
CCDC39-203ENST00000473854 GBP3Q9H0R5 595 aa3.95□□□□□ -1.78
CCDC39-203ENST00000473854 VTI1BQ9UEU0 232 aa3.95□□□□□ -1.78
CCDC39-203ENST00000473854 SIT1Q9Y3P8 196 aa3.95□□□□□ -1.78
CCDC39-203ENST00000473854 C2orf71A6NGG8 1288 aa3.94□□□□□ -1.78
CCDC39-203ENST00000473854 STXBP3O00186 592 aa3.94□□□□□ -1.78
CCDC39-203ENST00000473854 NARSO43776 548 aaKnown RBP3.94□□□□□ -1.78
CCDC39-203ENST00000473854 LRCH2Q5VUJ6 765 aa3.94□□□□□ -1.78
CCDC39-203ENST00000473854 DPY19L2P1Q6NXN4 242 aa3.94□□□□□ -1.78
CCDC39-203ENST00000473854 MILR1Q7Z6M3 343 aa3.94□□□□□ -1.78
CCDC39-203ENST00000473854 RALYLQ86SE5 291 aaKnown RBP3.94□□□□□ -1.78
CCDC39-203ENST00000473854 PPFIBP1Q86W92 1011 aa3.94□□□□□ -1.78
CCDC39-203ENST00000473854 SLITRK4Q8IW52 837 aa3.94□□□□□ -1.78
CCDC39-203ENST00000473854 NKD1Q969G9 470 aa3.94□□□□□ -1.78
CCDC39-203ENST00000473854 VOPP1Q96AW1 172 aa3.94□□□□□ -1.78
CCDC39-203ENST00000473854 ZNF451Q9Y4E5 1061 aa3.94□□□□□ -1.78
CCDC39-203ENST00000473854 C7orf72A4D263 438 aa3.93□□□□□ -1.78
CCDC39-203ENST00000473854 ANKRD33BA6NCL7 494 aa3.93□□□□□ -1.78
CCDC39-203ENST00000473854 FAM86C2PA6NEL3 165 aa3.93□□□□□ -1.78
CCDC39-203ENST00000473854 SGSM2O43147 1006 aa3.93□□□□□ -1.78
CCDC39-203ENST00000473854 PPP1R11O60927 126 aaPredicted RBP3.93□□□□□ -1.78
CCDC39-203ENST00000473854 TP53P04637 393 aaPredicted RBP3.93□□□□□ -1.78
CCDC39-203ENST00000473854 ADH4P08319 380 aa3.93□□□□□ -1.78
CCDC39-203ENST00000473854 AMPD2Q01433 879 aa3.93□□□□□ -1.78
CCDC39-203ENST00000473854 GRB10Q13322 594 aa3.93□□□□□ -1.78
CCDC39-203ENST00000473854 PPP2R5DQ14738 602 aa3.93□□□□□ -1.78
CCDC39-203ENST00000473854 CHRNA2Q15822 529 aa3.93□□□□□ -1.78
CCDC39-203ENST00000473854 USP39Q53GS9 565 aaKnown RBP3.93□□□□□ -1.78
CCDC39-203ENST00000473854 MROH9Q5TGP6 573 aa3.93□□□□□ -1.78
CCDC39-203ENST00000473854 CPNE8Q86YQ8 564 aa3.93□□□□□ -1.78
CCDC39-203ENST00000473854 IFNL2Q8IZJ0 200 aa3.93□□□□□ -1.78
CCDC39-203ENST00000473854 GIMAP8Q8ND71 665 aaPredicted RBP3.93□□□□□ -1.78
CCDC39-203ENST00000473854 PLEKHO2Q8TD55 490 aa3.93□□□□□ -1.78
CCDC39-203ENST00000473854 ADAM29Q9UKF5 820 aa3.93□□□□□ -1.78
CCDC39-203ENST00000473854 ZNRF3Q9ULT6 936 aa3.93□□□□□ -1.78
CCDC39-203ENST00000473854 PATL2C9JE40 543 aaKnown RBP3.92□□□□□ -1.78
CCDC39-203ENST00000473854 COMTP21964 271 aa3.92□□□□□ -1.78
CCDC39-203ENST00000473854 CR1LQ2VPA4 569 aa3.92□□□□□ -1.78
CCDC39-203ENST00000473854 RIOX2Q8IUF8 465 aa3.92□□□□□ -1.78
CCDC39-203ENST00000473854 SCUBE1Q8IWY4 988 aa3.92□□□□□ -1.78
CCDC39-203ENST00000473854 NEU4Q8WWR8 484 aaPredicted RBP3.92□□□□□ -1.78
CCDC39-203ENST00000473854 TOE1Q96GM8 510 aaKnown RBP3.92□□□□□ -1.78
CCDC39-203ENST00000473854 LMF1Q96S06 567 aa3.92□□□□□ -1.78
CCDC39-203ENST00000473854 SYT3Q9BQG1 590 aa3.92□□□□□ -1.78
CCDC39-203ENST00000473854 NT5C1AQ9BXI3 368 aa3.92□□□□□ -1.78
CCDC39-203ENST00000473854 UBP1Q9NZI7 540 aa3.92□□□□□ -1.78
CCDC39-203ENST00000473854 MARCH2Q9P0N8 246 aa3.92□□□□□ -1.78
CCDC39-203ENST00000473854 CROTQ9UKG9 612 aa3.92□□□□□ -1.78
CCDC39-203ENST00000473854 ZDHHC9Q9Y397 364 aa3.92□□□□□ -1.78
CCDC39-203ENST00000473854 PPM1BO75688 479 aa3.91□□□□□ -1.78
CCDC39-203ENST00000473854 CHGBP05060 677 aa3.91□□□□□ -1.78
CCDC39-203ENST00000473854 THBDP07204 575 aa3.91□□□□□ -1.78
CCDC39-203ENST00000473854 STAT5AP42229 794 aa3.91□□□□□ -1.78
CCDC39-203ENST00000473854 CSRP2Q16527 193 aa3.91□□□□□ -1.78
CCDC39-203ENST00000473854 KRTAP15-1Q3LI76 137 aa3.91□□□□□ -1.78
CCDC39-203ENST00000473854 ZNF568Q3ZCX4 644 aa3.91□□□□□ -1.78
CCDC39-203ENST00000473854 TCTN3Q6NUS6 607 aa3.91□□□□□ -1.78
CCDC39-203ENST00000473854 TRMT10BQ6PF06 316 aaKnown RBP3.91□□□□□ -1.78
CCDC39-203ENST00000473854 MRGPRGQ86SM5 289 aa3.91□□□□□ -1.78
CCDC39-203ENST00000473854 MMP19Q99542 508 aa3.91□□□□□ -1.78
CCDC39-203ENST00000473854 PTPN18Q99952 460 aa3.91□□□□□ -1.78
CCDC39-203ENST00000473854 ZNF214Q9UL59 606 aaPredicted RBP3.91□□□□□ -1.78
CCDC39-203ENST00000473854 SLC4A7Q9Y6M7 1214 aa3.91□□□□□ -1.78
CCDC39-203ENST00000473854 C22orf46C9J442 243 aa3.9□□□□□ -1.79
CCDC39-203ENST00000473854 FOXS1O43638 330 aa3.9□□□□□ -1.79
CCDC39-203ENST00000473854 CNOT4O95628 575 aaKnown RBP3.9□□□□□ -1.79
CCDC39-203ENST00000473854 MAKP20794 623 aa3.9□□□□□ -1.79
CCDC39-203ENST00000473854 MLLT6P55198 1093 aaPredicted RBP3.9□□□□□ -1.79
CCDC39-203ENST00000473854 DPY19L1Q2PZI1 675 aa3.9□□□□□ -1.79
CCDC39-203ENST00000473854 HS2ST1Q7LGA3 356 aa3.9□□□□□ -1.79
CCDC39-203ENST00000473854 ZCCHC14Q8WYQ9 949 aaKnown RBP3.9□□□□□ -1.79
CCDC39-203ENST00000473854 FAM89AQ96GI7 184 aa3.9□□□□□ -1.79
CCDC39-203ENST00000473854 ZSWIM3Q96MP5 696 aa3.9□□□□□ -1.79
CCDC39-203ENST00000473854 FAM161BQ96MY7 647 aa3.9□□□□□ -1.79
CCDC39-203ENST00000473854 PRRX2Q99811 253 aa3.9□□□□□ -1.79
CCDC39-203ENST00000473854 HAUS7Q99871 368 aa3.9□□□□□ -1.79
CCDC39-203ENST00000473854 MCMBPQ9BTE3 642 aa3.9□□□□□ -1.79
CCDC39-203ENST00000473854 COPRSQ9NQ92 184 aa3.9□□□□□ -1.79
CCDC39-203ENST00000473854 DLL4Q9NR61 685 aa3.9□□□□□ -1.79
CCDC39-203ENST00000473854 DTLQ9NZJ0 730 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms