RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 UMODL1Q5DID0 1318 aa15.02■□□□□ -0
SHROOM3-204ENST00000473602 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.02■□□□□ -0
SHROOM3-204ENST00000473602 HMGB1P09429 215 aaKnown RBP15.02■□□□□ -0
SHROOM3-204ENST00000473602 RABGGTBP53611 331 aa15.02■□□□□ -0
SHROOM3-204ENST00000473602 CCL23P55773 120 aa15.02■□□□□ -0
SHROOM3-204ENST00000473602 NKX3-2P78367 333 aa15.02■□□□□ -0
SHROOM3-204ENST00000473602 GHRHRQ02643 423 aa15.02■□□□□ -0
SHROOM3-204ENST00000473602 TNFAIP2Q03169 654 aa15.02■□□□□ -0
SHROOM3-204ENST00000473602 IQSEC1Q6DN90 963 aa15.02■□□□□ -0
SHROOM3-204ENST00000473602 DHX32Q7L7V1 743 aaKnown RBP15.02■□□□□ -0
SHROOM3-204ENST00000473602 SLC43A3Q8NBI5 491 aa15.02■□□□□ -0
SHROOM3-204ENST00000473602 NECAB3Q96P71 396 aaPredicted RBP15.02■□□□□ -0
SHROOM3-204ENST00000473602 SPZ1Q9BXG8 430 aa15.02■□□□□ -0
SHROOM3-204ENST00000473602 KIAA1217Q5T5P2 1943 aa15.02□□□□□ -0.01
SHROOM3-204ENST00000473602 PNMA6FA0A0J9YX94 578 aa15.01□□□□□ -0.01
SHROOM3-204ENST00000473602 CYTH3O43739 400 aa15.01□□□□□ -0.01
SHROOM3-204ENST00000473602 EDNRBP24530 442 aa15.01□□□□□ -0.01
SHROOM3-204ENST00000473602 HSPA4P34932 840 aa15.01□□□□□ -0.01
SHROOM3-204ENST00000473602 PLA2G5P39877 138 aa15.01□□□□□ -0.01
SHROOM3-204ENST00000473602 KCNB2Q92953 911 aa15.01□□□□□ -0.01
SHROOM3-204ENST00000473602 PURBQ96QR8 312 aaKnown RBP15.01□□□□□ -0.01
SHROOM3-204ENST00000473602 TSPYL2Q9H2G4 693 aaPredicted RBP15.01□□□□□ -0.01
SHROOM3-204ENST00000473602 GPHNQ9NQX3 736 aaPredicted RBP15.01□□□□□ -0.01
SHROOM3-204ENST00000473602 Q9Y3F1 56 aa15.01□□□□□ -0.01
SHROOM3-204ENST00000473602 PCDHA1Q9Y5I3 950 aa15.01□□□□□ -0.01
SHROOM3-204ENST00000473602 SLC12A7Q9Y666 1083 aa15.01□□□□□ -0.01
SHROOM3-204ENST00000473602 GRIN2DO15399 1336 aa15□□□□□ -0.01
SHROOM3-204ENST00000473602 BMP1P13497 986 aa15□□□□□ -0.01
SHROOM3-204ENST00000473602 MYOGP15173 224 aa15□□□□□ -0.01
SHROOM3-204ENST00000473602 PTGS1P23219 599 aa15□□□□□ -0.01
SHROOM3-204ENST00000473602 EXOSC10Q01780 885 aaKnown RBP15□□□□□ -0.01
SHROOM3-204ENST00000473602 PDE4DQ08499 809 aa15□□□□□ -0.01
SHROOM3-204ENST00000473602 ITGA7Q13683 1181 aa15□□□□□ -0.01
SHROOM3-204ENST00000473602 SLC35G1Q2M3R5 365 aa15□□□□□ -0.01
SHROOM3-204ENST00000473602 TAPT1Q6NXT6 567 aa15□□□□□ -0.01
SHROOM3-204ENST00000473602 HOMER1Q86YM7 354 aa15□□□□□ -0.01
SHROOM3-204ENST00000473602 FBXO16Q8IX29 292 aaPredicted RBP15□□□□□ -0.01
SHROOM3-204ENST00000473602 RASEFQ8IZ41 740 aa15□□□□□ -0.01
SHROOM3-204ENST00000473602 MICALL1Q8N3F8 863 aa15□□□□□ -0.01
SHROOM3-204ENST00000473602 SYTL5Q8TDW5 730 aaPredicted RBP15□□□□□ -0.01
SHROOM3-204ENST00000473602 NSUN6Q8TEA1 469 aaKnown RBP15□□□□□ -0.01
SHROOM3-204ENST00000473602 FAM122AQ96E09 287 aa15□□□□□ -0.01
SHROOM3-204ENST00000473602 PIGSQ96S52 555 aa15□□□□□ -0.01
SHROOM3-204ENST00000473602 MYL10Q9BUA6 226 aa15□□□□□ -0.01
SHROOM3-204ENST00000473602 TRPV6Q9H1D0 765 aa15□□□□□ -0.01
SHROOM3-204ENST00000473602 GNEQ9Y223 722 aaKnown RBP15□□□□□ -0.01
SHROOM3-204ENST00000473602 RBM47A0AV96 593 aaKnown RBP14.99□□□□□ -0.01
SHROOM3-204ENST00000473602 DYNC1LI2O43237 492 aaPredicted RBP14.99□□□□□ -0.01
SHROOM3-204ENST00000473602 PPP1R11O60927 126 aaPredicted RBP14.99□□□□□ -0.01
SHROOM3-204ENST00000473602 CABYRO75952 493 aa14.99□□□□□ -0.01
SHROOM3-204ENST00000473602 HSD17B4P51659 736 aa14.99□□□□□ -0.01
SHROOM3-204ENST00000473602 TFF2Q03403 129 aa14.99□□□□□ -0.01
SHROOM3-204ENST00000473602 COL9A3Q14050 684 aaPredicted RBP14.99□□□□□ -0.01
SHROOM3-204ENST00000473602 FSCN1Q16658 493 aaKnown RBP14.99□□□□□ -0.01
SHROOM3-204ENST00000473602 ADCK5Q3MIX3 580 aa14.99□□□□□ -0.01
SHROOM3-204ENST00000473602 DUSP28Q4G0W2 176 aa14.99□□□□□ -0.01
SHROOM3-204ENST00000473602 PPP2R2DQ66LE6 453 aa14.99□□□□□ -0.01
SHROOM3-204ENST00000473602 SYNE3Q6ZMZ3 975 aa14.99□□□□□ -0.01
SHROOM3-204ENST00000473602 EEPD1Q7L9B9 569 aa14.99□□□□□ -0.01
SHROOM3-204ENST00000473602 TLK2Q86UE8 772 aa14.99□□□□□ -0.01
SHROOM3-204ENST00000473602 RRP36Q96EU6 259 aaKnown RBP14.99□□□□□ -0.01
SHROOM3-204ENST00000473602 IWS1Q96ST2 819 aa14.99□□□□□ -0.01
SHROOM3-204ENST00000473602 NOC4LQ9BVI4 516 aaKnown RBP14.99□□□□□ -0.01
SHROOM3-204ENST00000473602 AP5M1Q9H0R1 490 aa14.99□□□□□ -0.01
SHROOM3-204ENST00000473602 SLC4A7Q9Y6M7 1214 aa14.99□□□□□ -0.01
SHROOM3-204ENST00000473602 OPLAHO14841 1288 aa14.98□□□□□ -0.01
SHROOM3-204ENST00000473602 B4GALT4O60513 344 aa14.98□□□□□ -0.01
SHROOM3-204ENST00000473602 CFBP00751 764 aa14.98□□□□□ -0.01
SHROOM3-204ENST00000473602 SMPD1P17405 629 aa14.98□□□□□ -0.01
SHROOM3-204ENST00000473602 RCAN1P53805 252 aa14.98□□□□□ -0.01
SHROOM3-204ENST00000473602 APOA5Q6Q788 366 aa14.98□□□□□ -0.01
SHROOM3-204ENST00000473602 RPUSD2Q8IZ73 545 aaKnown RBP14.98□□□□□ -0.01
SHROOM3-204ENST00000473602 SCFD2Q8WU76 684 aa14.98□□□□□ -0.01
SHROOM3-204ENST00000473602 TBC1D5Q92609 795 aa14.98□□□□□ -0.01
SHROOM3-204ENST00000473602 LRRC2Q9BYS8 371 aa14.98□□□□□ -0.01
SHROOM3-204ENST00000473602 WNT8AQ9H1J5 351 aa14.98□□□□□ -0.01
SHROOM3-204ENST00000473602 PDGFCQ9NRA1 345 aa14.98□□□□□ -0.01
SHROOM3-204ENST00000473602 COL20A1Q9P218 1284 aa14.98□□□□□ -0.01
SHROOM3-204ENST00000473602 SEC63Q9UGP8 760 aaKnown RBP14.98□□□□□ -0.01
SHROOM3-204ENST00000473602 DDX49Q9Y6V7 483 aaKnown RBP14.98□□□□□ -0.01
SHROOM3-204ENST00000473602 REV3LO60673 3130 aa14.98□□□□□ -0.01
SHROOM3-204ENST00000473602 ZBBXA8MT70 800 aa14.97□□□□□ -0.01
SHROOM3-204ENST00000473602 NKRFO15226 690 aaKnown RBP eCLIP14.97□□□□□ -0.01
SHROOM3-204ENST00000473602 ZEB2O60315 1214 aa14.97□□□□□ -0.01
SHROOM3-204ENST00000473602 PSMC6P62333 389 aa14.97□□□□□ -0.01
SHROOM3-204ENST00000473602 SKIV2LQ15477 1246 aaKnown RBP14.97□□□□□ -0.01
SHROOM3-204ENST00000473602 MICU3Q86XE3 530 aa14.97□□□□□ -0.01
SHROOM3-204ENST00000473602 FANCBQ8NB91 859 aa14.97□□□□□ -0.01
SHROOM3-204ENST00000473602 VWCEQ96DN2 955 aa14.97□□□□□ -0.01
SHROOM3-204ENST00000473602 SCLYQ96I15 445 aa14.97□□□□□ -0.01
SHROOM3-204ENST00000473602 TAAR1Q96RJ0 339 aa14.97□□□□□ -0.01
SHROOM3-204ENST00000473602 RMDN3Q96TC7 470 aa14.97□□□□□ -0.01
SHROOM3-204ENST00000473602 C1QTNF1Q9BXJ1 281 aa14.97□□□□□ -0.01
SHROOM3-204ENST00000473602 WDR11Q9BZH6 1224 aa14.97□□□□□ -0.01
SHROOM3-204ENST00000473602 RBM28Q9NW13 759 aaKnown RBP14.97□□□□□ -0.01
SHROOM3-204ENST00000473602 PCDHA11Q9Y5I1 949 aa14.97□□□□□ -0.01
SHROOM3-204ENST00000473602 RFXAPO00287 272 aa14.96□□□□□ -0.01
SHROOM3-204ENST00000473602 PLEKHA8P1O95397 391 aa14.96□□□□□ -0.01
SHROOM3-204ENST00000473602 ATP2A2P16615 1042 aaKnown RBP14.96□□□□□ -0.01
SHROOM3-204ENST00000473602 RXRAP19793 462 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms