RNA–Protein interactions for RNA: ENST00000473494.6

SEC22A-204, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 1,011 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-204ENST00000473494 PDGFRBP09619 1106 aa8.65□□□□□ -1.02
SEC22A-204ENST00000473494 FUT4P22083 530 aa8.65□□□□□ -1.02
SEC22A-204ENST00000473494 CHRNEQ04844 493 aa8.65□□□□□ -1.02
SEC22A-204ENST00000473494 STRN3Q13033 797 aa8.65□□□□□ -1.02
SEC22A-204ENST00000473494 C16orf59Q7L2K0 433 aa8.65□□□□□ -1.02
SEC22A-204ENST00000473494 OVCH1Q7RTY7 1134 aa8.65□□□□□ -1.02
SEC22A-204ENST00000473494 MTA3Q9BTC8 594 aa8.65□□□□□ -1.02
SEC22A-204ENST00000473494 ADAMTS10Q9H324 1103 aa8.65□□□□□ -1.02
SEC22A-204ENST00000473494 CLDND1Q9NY35 253 aa8.65□□□□□ -1.02
SEC22A-204ENST00000473494 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.65□□□□□ -1.02
SEC22A-204ENST00000473494 APOBEC2Q9Y235 224 aaKnown RBP8.65□□□□□ -1.02
SEC22A-204ENST00000473494 X6R8D5 127 aa8.65□□□□□ -1.02
SEC22A-204ENST00000473494 GSTA4O15217 222 aa8.64□□□□□ -1.03
SEC22A-204ENST00000473494 SRGAP2CP0DJJ0 459 aa8.64□□□□□ -1.03
SEC22A-204ENST00000473494 FPR2P25090 351 aa8.64□□□□□ -1.03
SEC22A-204ENST00000473494 HABP4Q5JVS0 413 aaKnown RBP8.64□□□□□ -1.03
SEC22A-204ENST00000473494 CEP128Q6ZU80 1094 aa8.64□□□□□ -1.03
SEC22A-204ENST00000473494 NECAB2Q7Z6G3 386 aa8.64□□□□□ -1.03
SEC22A-204ENST00000473494 PDZD8Q8NEN9 1154 aa8.64□□□□□ -1.03
SEC22A-204ENST00000473494 FLCNQ8NFG4 579 aa8.64□□□□□ -1.03
SEC22A-204ENST00000473494 CCDC120Q96HB5 630 aa8.64□□□□□ -1.03
SEC22A-204ENST00000473494 TMEM169Q96HH4 297 aa8.64□□□□□ -1.03
SEC22A-204ENST00000473494 METTL14Q9HCE5 456 aaKnown RBP8.64□□□□□ -1.03
SEC22A-204ENST00000473494 PAK6Q9NQU5 681 aaPredicted RBP8.64□□□□□ -1.03
SEC22A-204ENST00000473494 GULP1Q9UBP9 304 aa8.64□□□□□ -1.03
SEC22A-204ENST00000473494 B4GALT6Q9UBX8 382 aa8.64□□□□□ -1.03
SEC22A-204ENST00000473494 ZNF891A8MT65 544 aaPredicted RBP8.63□□□□□ -1.03
SEC22A-204ENST00000473494 TRAF5O00463 557 aa8.63□□□□□ -1.03
SEC22A-204ENST00000473494 NRDCO43847 1150 aa8.63□□□□□ -1.03
SEC22A-204ENST00000473494 F2P00734 622 aa8.63□□□□□ -1.03
SEC22A-204ENST00000473494 PYGMP11217 842 aa8.63□□□□□ -1.03
SEC22A-204ENST00000473494 RTP1P59025 263 aa8.63□□□□□ -1.03
SEC22A-204ENST00000473494 STAT4Q14765 748 aa8.63□□□□□ -1.03
SEC22A-204ENST00000473494 NR0B2Q15466 257 aa8.63□□□□□ -1.03
SEC22A-204ENST00000473494 SKOR2Q2VWA4 1001 aaPredicted RBP8.63□□□□□ -1.03
SEC22A-204ENST00000473494 SLC23A3Q6PIS1 610 aa8.63□□□□□ -1.03
SEC22A-204ENST00000473494 RIOX2Q8IUF8 465 aa8.63□□□□□ -1.03
SEC22A-204ENST00000473494 TEX2Q8IWB9 1127 aa8.63□□□□□ -1.03
SEC22A-204ENST00000473494 ATL2Q8NHH9 583 aa8.63□□□□□ -1.03
SEC22A-204ENST00000473494 PLEKHO2Q8TD55 490 aa8.63□□□□□ -1.03
SEC22A-204ENST00000473494 ASIC4Q96FT7 647 aa8.63□□□□□ -1.03
SEC22A-204ENST00000473494 IFT22Q9H7X7 185 aa8.63□□□□□ -1.03
SEC22A-204ENST00000473494 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.63□□□□□ -1.03
SEC22A-204ENST00000473494 CABP5Q9NP86 173 aa8.63□□□□□ -1.03
SEC22A-204ENST00000473494 MARCH2Q9P0N8 246 aa8.63□□□□□ -1.03
SEC22A-204ENST00000473494 KLHL42Q9P2K6 505 aa8.63□□□□□ -1.03
SEC22A-204ENST00000473494 CBLCQ9ULV8 474 aa8.63□□□□□ -1.03
SEC22A-204ENST00000473494 TAF6LQ9Y6J9 622 aa8.63□□□□□ -1.03
SEC22A-204ENST00000473494 WTIPA6NIX2 430 aaPredicted RBP8.62□□□□□ -1.03
SEC22A-204ENST00000473494 NOTOA8MTQ0 251 aa8.62□□□□□ -1.03
SEC22A-204ENST00000473494 ZNF561-AS1K7EIQ3 104 aa8.62□□□□□ -1.03
SEC22A-204ENST00000473494 GPR39O43194 453 aa8.62□□□□□ -1.03
SEC22A-204ENST00000473494 PPP1R11O60927 126 aaPredicted RBP8.62□□□□□ -1.03
SEC22A-204ENST00000473494 RNF219Q5W0B1 726 aaPredicted RBP8.62□□□□□ -1.03
SEC22A-204ENST00000473494 GALNT18Q6P9A2 607 aa8.62□□□□□ -1.03
SEC22A-204ENST00000473494 OTOP1Q7RTM1 612 aa8.62□□□□□ -1.03
SEC22A-204ENST00000473494 FERMT3Q86UX7 667 aa8.62□□□□□ -1.03
SEC22A-204ENST00000473494 CISD2Q8N5K1 135 aaKnown RBP8.62□□□□□ -1.03
SEC22A-204ENST00000473494 SMC1BQ8NDV3 1235 aa8.62□□□□□ -1.03
SEC22A-204ENST00000473494 PI4K2BQ8TCG2 481 aa8.62□□□□□ -1.03
SEC22A-204ENST00000473494 USP7Q93009 1102 aa8.62□□□□□ -1.03
SEC22A-204ENST00000473494 CHAMP1Q96JM3 812 aa8.62□□□□□ -1.03
SEC22A-204ENST00000473494 TTC1Q99614 292 aa8.62□□□□□ -1.03
SEC22A-204ENST00000473494 EPB41L1Q9H4G0 881 aa8.62□□□□□ -1.03
SEC22A-204ENST00000473494 IMPACTQ9P2X3 320 aa8.62□□□□□ -1.03
SEC22A-204ENST00000473494 RWDD3Q9Y3V2 267 aa8.62□□□□□ -1.03
SEC22A-204ENST00000473494 FITM1A5D6W6 292 aa8.61□□□□□ -1.03
SEC22A-204ENST00000473494 ZEB2O60315 1214 aa8.61□□□□□ -1.03
SEC22A-204ENST00000473494 YBX3P16989 372 aaKnown RBP eCLIP8.61□□□□□ -1.03
SEC22A-204ENST00000473494 DNM2P50570 870 aa8.61□□□□□ -1.03
SEC22A-204ENST00000473494 SCNN1BP51168 640 aa8.61□□□□□ -1.03
SEC22A-204ENST00000473494 ST5P78524 1137 aa8.61□□□□□ -1.03
SEC22A-204ENST00000473494 LACTBP83111 547 aaPredicted RBP8.61□□□□□ -1.03
SEC22A-204ENST00000473494 EXOSC10Q01780 885 aaKnown RBP8.61□□□□□ -1.03
SEC22A-204ENST00000473494 MROH9Q5TGP6 573 aa8.61□□□□□ -1.03
SEC22A-204ENST00000473494 LHFPL2Q6ZUX7 228 aa8.61□□□□□ -1.03
SEC22A-204ENST00000473494 CEP68Q76N32 757 aa8.61□□□□□ -1.03
SEC22A-204ENST00000473494 SPATS2Q86XZ4 545 aaKnown RBP8.61□□□□□ -1.03
SEC22A-204ENST00000473494 TRMT2BQ96GJ1 504 aaKnown RBP8.61□□□□□ -1.03
SEC22A-204ENST00000473494 SP110Q9HB58 689 aa8.61□□□□□ -1.03
SEC22A-204ENST00000473494 C19orf73Q9NVV2 129 aa8.61□□□□□ -1.03
SEC22A-204ENST00000473494 BTG4Q9NY30 223 aa8.61□□□□□ -1.03
SEC22A-204ENST00000473494 FBLN5Q9UBX5 448 aa8.61□□□□□ -1.03
SEC22A-204ENST00000473494 ACSL6Q9UKU0 697 aa8.61□□□□□ -1.03
SEC22A-204ENST00000473494 ANGEL1Q9UNK9 670 aaKnown RBP8.61□□□□□ -1.03
SEC22A-204ENST00000473494 PHLDB1Q86UU1 1377 aa8.61□□□□□ -1.03
SEC22A-204ENST00000473494 C22orf46C9J442 243 aa8.6□□□□□ -1.03
SEC22A-204ENST00000473494 GAS7O60861 476 aa8.6□□□□□ -1.03
SEC22A-204ENST00000473494 ADCYAP1R1P41586 468 aa8.6□□□□□ -1.03
SEC22A-204ENST00000473494 EVA1CP58658 441 aa8.6□□□□□ -1.03
SEC22A-204ENST00000473494 BRDTQ58F21 947 aaPredicted RBP8.6□□□□□ -1.03
SEC22A-204ENST00000473494 CREB3L3Q68CJ9 461 aa8.6□□□□□ -1.03
SEC22A-204ENST00000473494 OXR1Q8N573 874 aa8.6□□□□□ -1.03
SEC22A-204ENST00000473494 LZTR1Q8N653 840 aa8.6□□□□□ -1.03
SEC22A-204ENST00000473494 WDR66Q8TBY9 1149 aa8.6□□□□□ -1.03
SEC22A-204ENST00000473494 PLCD4Q9BRC7 762 aa8.6□□□□□ -1.03
SEC22A-204ENST00000473494 SMURF1Q9HCE7 757 aa8.6□□□□□ -1.03
SEC22A-204ENST00000473494 CRTAC1Q9NQ79 661 aa8.6□□□□□ -1.03
SEC22A-204ENST00000473494 PRDM7Q9NQW5 492 aa8.6□□□□□ -1.03
SEC22A-204ENST00000473494 COA3Q9Y2R0 106 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms