RNA–Protein interactions for RNA: ENST00000473460.1

GINS1-202, Transcript of GINS complex subunit 1, humanhuman

TSL 2

Gene GINS1, Length 541 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS1-202ENST00000473460 TXNDC5Q8NBS9 432 aaKnown RBP5.77□□□□□ -1.49
GINS1-202ENST00000473460 BVESQ8NE79 360 aa5.77□□□□□ -1.49
GINS1-202ENST00000473460 FRS2Q8WU20 508 aa5.77□□□□□ -1.49
GINS1-202ENST00000473460 SEC14L1Q92503 715 aa5.77□□□□□ -1.49
GINS1-202ENST00000473460 MRGPRX3Q96LB0 322 aa5.77□□□□□ -1.49
GINS1-202ENST00000473460 AP5M1Q9H0R1 490 aa5.77□□□□□ -1.49
GINS1-202ENST00000473460 PCDH18Q9HCL0 1135 aa5.77□□□□□ -1.49
GINS1-202ENST00000473460 SCAMP3O14828 347 aaKnown RBP5.76□□□□□ -1.49
GINS1-202ENST00000473460 NASPP49321 788 aaPredicted RBP5.76□□□□□ -1.49
GINS1-202ENST00000473460 KIAA2012Q0VF49 1180 aa5.76□□□□□ -1.49
GINS1-202ENST00000473460 ADAM9Q13443 819 aa5.76□□□□□ -1.49
GINS1-202ENST00000473460 NLRP10Q86W26 655 aa5.76□□□□□ -1.49
GINS1-202ENST00000473460 TRIM59Q8IWR1 403 aa5.76□□□□□ -1.49
GINS1-202ENST00000473460 FAM126BQ8IXS8 530 aa5.76□□□□□ -1.49
GINS1-202ENST00000473460 Q8N1Y9 231 aa5.76□□□□□ -1.49
GINS1-202ENST00000473460 TTLL6Q8N841 843 aa5.76□□□□□ -1.49
GINS1-202ENST00000473460 NPLOC4Q8TAT6 608 aa5.76□□□□□ -1.49
GINS1-202ENST00000473460 BTG4Q9NY30 223 aa5.76□□□□□ -1.49
GINS1-202ENST00000473460 TMEFF2Q9UIK5 374 aaPredicted RBP5.76□□□□□ -1.49
GINS1-202ENST00000473460 DDX3XO00571 662 aaKnown RBP eCLIP5.75□□□□□ -1.49
GINS1-202ENST00000473460 VAMP1P23763 118 aa5.75□□□□□ -1.49
GINS1-202ENST00000473460 STAT5AP42229 794 aa5.75□□□□□ -1.49
GINS1-202ENST00000473460 GTF2IRD2BQ6EKJ0 949 aa5.75□□□□□ -1.49
GINS1-202ENST00000473460 LIMS2Q7Z4I7 341 aa5.75□□□□□ -1.49
GINS1-202ENST00000473460 GTF2IRD2Q86UP8 949 aa5.75□□□□□ -1.49
GINS1-202ENST00000473460 RIOX2Q8IUF8 465 aa5.75□□□□□ -1.49
GINS1-202ENST00000473460 CCDC103Q8IW40 242 aa5.75□□□□□ -1.49
GINS1-202ENST00000473460 NKX2-4Q9H2Z4 354 aa5.75□□□□□ -1.49
GINS1-202ENST00000473460 CYP26B1Q9NR63 512 aa5.75□□□□□ -1.49
GINS1-202ENST00000473460 ST6GALNAC2Q9UJ37 374 aa5.75□□□□□ -1.49
GINS1-202ENST00000473460 FBXL7Q9UJT9 491 aa5.75□□□□□ -1.49
GINS1-202ENST00000473460 B4GALT3O60512 393 aa5.74□□□□□ -1.49
GINS1-202ENST00000473460 ZNF28P17035 718 aa5.74□□□□□ -1.49
GINS1-202ENST00000473460 CDSNQ15517 529 aa5.74□□□□□ -1.49
GINS1-202ENST00000473460 MILR1Q7Z6M3 343 aa5.74□□□□□ -1.49
GINS1-202ENST00000473460 SLC16A11Q8NCK7 471 aa5.74□□□□□ -1.49
GINS1-202ENST00000473460 APBA2Q99767 749 aa5.74□□□□□ -1.49
GINS1-202ENST00000473460 X6R8D5 127 aa5.74□□□□□ -1.49
GINS1-202ENST00000473460 TBX1O43435 398 aa5.73□□□□□ -1.49
GINS1-202ENST00000473460 ZNF143P52747 638 aaPredicted RBP5.73□□□□□ -1.49
GINS1-202ENST00000473460 RBM10P98175 930 aaKnown RBP5.73□□□□□ -1.49
GINS1-202ENST00000473460 MROH9Q5TGP6 573 aa5.73□□□□□ -1.49
GINS1-202ENST00000473460 BORAQ6PGQ7 559 aa5.73□□□□□ -1.49
GINS1-202ENST00000473460 POMZP3Q6PJE2 187 aa5.73□□□□□ -1.49
GINS1-202ENST00000473460 ZC3H18Q86VM9 953 aaKnown RBP5.73□□□□□ -1.49
GINS1-202ENST00000473460 CRACR2BQ8N4Y2 399 aaPredicted RBP5.73□□□□□ -1.49
GINS1-202ENST00000473460 DVL3Q92997 716 aaPredicted RBP5.73□□□□□ -1.49
GINS1-202ENST00000473460 MBD6Q96DN6 1003 aa5.73□□□□□ -1.49
GINS1-202ENST00000473460 PPP4R1LQ9P1A2 415 aa5.73□□□□□ -1.49
GINS1-202ENST00000473460 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.73□□□□□ -1.49
GINS1-202ENST00000473460 RPL11P62913 178 aaKnown RBP5.72□□□□□ -1.49
GINS1-202ENST00000473460 HDLBPQ00341 1268 aaKnown RBP5.72□□□□□ -1.49
GINS1-202ENST00000473460 CEP68Q76N32 757 aa5.72□□□□□ -1.49
GINS1-202ENST00000473460 FAM124AQ86V42 546 aa5.72□□□□□ -1.49
GINS1-202ENST00000473460 Q8N1X5 172 aa5.72□□□□□ -1.49
GINS1-202ENST00000473460 KREMEN2Q8NCW0 462 aa5.72□□□□□ -1.49
GINS1-202ENST00000473460 CHST13Q8NET6 341 aa5.72□□□□□ -1.49
GINS1-202ENST00000473460 BTN2A2Q8WVV5 523 aa5.72□□□□□ -1.49
GINS1-202ENST00000473460 LCORQ96JN0 433 aaPredicted RBP5.72□□□□□ -1.49
GINS1-202ENST00000473460 SCAND2PQ9GZW5 306 aaPredicted RBP5.72□□□□□ -1.49
GINS1-202ENST00000473460 TIMM13Q9Y5L4 95 aaPredicted RBP5.72□□□□□ -1.49
GINS1-202ENST00000473460 C9orf118A6NHY6 69 aa5.71□□□□□ -1.5
GINS1-202ENST00000473460 NOP56O00567 594 aaKnown RBP5.71□□□□□ -1.5
GINS1-202ENST00000473460 FSHBP01225 129 aa5.71□□□□□ -1.5
GINS1-202ENST00000473460 BCL6P41182 706 aa5.71□□□□□ -1.5
GINS1-202ENST00000473460 ICAM4Q14773 271 aa5.71□□□□□ -1.5
GINS1-202ENST00000473460 E4F1Q66K89 784 aaPredicted RBP5.71□□□□□ -1.5
GINS1-202ENST00000473460 IQCEQ6IPM2 695 aa5.71□□□□□ -1.5
GINS1-202ENST00000473460 GLB1LQ6UWU2 654 aa5.71□□□□□ -1.5
GINS1-202ENST00000473460 SPRED1Q7Z699 444 aa5.71□□□□□ -1.5
GINS1-202ENST00000473460 NT5DC4Q86YG4 428 aa5.71□□□□□ -1.5
GINS1-202ENST00000473460 ARRDC4Q8NCT1 418 aa5.71□□□□□ -1.5
GINS1-202ENST00000473460 ZSWIM3Q96MP5 696 aa5.71□□□□□ -1.5
GINS1-202ENST00000473460 YTHDC1Q96MU7 727 aaKnown RBP5.71□□□□□ -1.5
GINS1-202ENST00000473460 CD248Q9HCU0 757 aa5.71□□□□□ -1.5
GINS1-202ENST00000473460 WASF3Q9UPY6 502 aa5.71□□□□□ -1.5
GINS1-202ENST00000473460 ZNF652Q9Y2D9 606 aa5.71□□□□□ -1.5
GINS1-202ENST00000473460 ZNF536O15090 1300 aa5.71□□□□□ -1.5
GINS1-202ENST00000473460 LAMTOR5O43504 91 aa5.7□□□□□ -1.5
GINS1-202ENST00000473460 MLLT6P55198 1093 aaPredicted RBP5.7□□□□□ -1.5
GINS1-202ENST00000473460 NKX3-2P78367 333 aa5.7□□□□□ -1.5
GINS1-202ENST00000473460 TMCO4Q5TGY1 634 aa5.7□□□□□ -1.5
GINS1-202ENST00000473460 RCBTB1Q8NDN9 531 aa5.7□□□□□ -1.5
GINS1-202ENST00000473460 CPLX3Q8WVH0 158 aa5.7□□□□□ -1.5
GINS1-202ENST00000473460 DIO2Q92813 273 aa5.7□□□□□ -1.5
GINS1-202ENST00000473460 TRMT2BQ96GJ1 504 aaKnown RBP5.7□□□□□ -1.5
GINS1-202ENST00000473460 SEC16BQ96JE7 1060 aa5.7□□□□□ -1.5
GINS1-202ENST00000473460 TCRBV5S2A0A599 114 aa5.69□□□□□ -1.5
GINS1-202ENST00000473460 GPR42O15529 346 aa5.69□□□□□ -1.5
GINS1-202ENST00000473460 TADA3O75528 432 aa5.69□□□□□ -1.5
GINS1-202ENST00000473460 SCG5P05408 212 aa5.69□□□□□ -1.5
GINS1-202ENST00000473460 NAT2P11245 290 aa5.69□□□□□ -1.5
GINS1-202ENST00000473460 C6P13671 934 aa5.69□□□□□ -1.5
GINS1-202ENST00000473460 IL13P35225 146 aa5.69□□□□□ -1.5
GINS1-202ENST00000473460 GTF2A2P52657 109 aa5.69□□□□□ -1.5
GINS1-202ENST00000473460 NCAPHQ15003 741 aa5.69□□□□□ -1.5
GINS1-202ENST00000473460 TESK1Q15569 626 aa5.69□□□□□ -1.5
GINS1-202ENST00000473460 SF1Q15637 639 aaKnown RBP5.69□□□□□ -1.5
GINS1-202ENST00000473460 PRSS53Q2L4Q9 553 aa5.69□□□□□ -1.5
GINS1-202ENST00000473460 PRAMEF18Q5VWM3 479 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms