RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 LRRC41Q15345 812 aa15.09■□□□□ 0.01
TPM3-216ENST00000473036 ARHGEF16Q5VV41 709 aa15.09■□□□□ 0.01
TPM3-216ENST00000473036 CCSAPQ6IQ19 270 aaPredicted RBP15.09■□□□□ 0.01
TPM3-216ENST00000473036 SAMD3Q8N6K7 520 aa15.09■□□□□ 0.01
TPM3-216ENST00000473036 KLHDC9Q8NEP7 349 aa15.09■□□□□ 0.01
TPM3-216ENST00000473036 COPS5Q92905 334 aa15.09■□□□□ 0.01
TPM3-216ENST00000473036 GTF3C6Q969F1 213 aa15.09■□□□□ 0.01
TPM3-216ENST00000473036 COL25A1Q9BXS0 654 aaPredicted RBP15.09■□□□□ 0.01
TPM3-216ENST00000473036 PSTPIP2Q9H939 334 aa15.09■□□□□ 0.01
TPM3-216ENST00000473036 VTA1Q9NP79 307 aa15.09■□□□□ 0.01
TPM3-216ENST00000473036 RIC8AQ9NPQ8 531 aa15.09■□□□□ 0.01
TPM3-216ENST00000473036 FAM184BQ9ULE4 1060 aa15.09■□□□□ 0.01
TPM3-216ENST00000473036 DNM1LO00429 736 aa15.08■□□□□ 0
TPM3-216ENST00000473036 DUSP11O75319 330 aaKnown RBP15.08■□□□□ 0
TPM3-216ENST00000473036 RARBP10826 455 aa15.08■□□□□ 0
TPM3-216ENST00000473036 FDPSP14324 419 aaKnown RBP15.08■□□□□ 0
TPM3-216ENST00000473036 CLK2P49760 499 aaKnown RBP15.08■□□□□ 0
TPM3-216ENST00000473036 NAPAP54920 295 aa15.08■□□□□ 0
TPM3-216ENST00000473036 PDE4DQ08499 809 aa15.08■□□□□ 0
TPM3-216ENST00000473036 ANKRD1Q15327 319 aa15.08■□□□□ 0
TPM3-216ENST00000473036 CCDC62Q6P9F0 684 aa15.08■□□□□ 0
TPM3-216ENST00000473036 VSIG10LQ86VR7 867 aa15.08■□□□□ 0
TPM3-216ENST00000473036 PGBD1Q96JS3 809 aa15.08■□□□□ 0
TPM3-216ENST00000473036 IWS1Q96ST2 819 aa15.08■□□□□ 0
TPM3-216ENST00000473036 SLKQ9H2G2 1235 aaPredicted RBP15.08■□□□□ 0
TPM3-216ENST00000473036 XPNPEP3Q9NQH7 507 aa15.08■□□□□ 0
TPM3-216ENST00000473036 GJB4Q9NTQ9 266 aa15.08■□□□□ 0
TPM3-216ENST00000473036 TMEM260Q9NX78 707 aa15.08■□□□□ 0
TPM3-216ENST00000473036 VPS54Q9P1Q0 977 aa15.08■□□□□ 0
TPM3-216ENST00000473036 PRKAG2Q9UGJ0 569 aa15.08■□□□□ 0
TPM3-216ENST00000473036 VCANP13611 3396 aa15.08■□□□□ 0
TPM3-216ENST00000473036 DOCK5Q9H7D0 1870 aa15.08■□□□□ 0
TPM3-216ENST00000473036 MYH7BA7E2Y1 1941 aa15.07■□□□□ 0
TPM3-216ENST00000473036 SMCO2A6NFE2 343 aa15.07■□□□□ 0
TPM3-216ENST00000473036 EDIL3O43854 480 aa15.07■□□□□ 0
TPM3-216ENST00000473036 JAK2O60674 1132 aa15.07■□□□□ 0
TPM3-216ENST00000473036 MYCLP12524 364 aaPredicted RBP15.07■□□□□ 0
TPM3-216ENST00000473036 GJA9P57773 515 aa15.07■□□□□ 0
TPM3-216ENST00000473036 TNFAIP2Q03169 654 aa15.07■□□□□ 0
TPM3-216ENST00000473036 NPY5RQ15761 445 aa15.07■□□□□ 0
TPM3-216ENST00000473036 PPP1R18Q6NYC8 613 aa15.07■□□□□ 0
TPM3-216ENST00000473036 WDR11Q9BZH6 1224 aa15.07■□□□□ 0
TPM3-216ENST00000473036 UPF3AQ9H1J1 476 aaKnown RBP15.07■□□□□ 0
TPM3-216ENST00000473036 BCAS3Q9H6U6 928 aa15.07■□□□□ 0
TPM3-216ENST00000473036 NKX3-2P78367 333 aa15.06■□□□□ 0
TPM3-216ENST00000473036 MDM2Q00987 491 aaPredicted RBP15.06■□□□□ 0
TPM3-216ENST00000473036 SSRP1Q08945 709 aaKnown RBP15.06■□□□□ 0
TPM3-216ENST00000473036 SEMA3FQ13275 785 aa15.06■□□□□ 0
TPM3-216ENST00000473036 STXBP2Q15833 593 aa15.06■□□□□ 0
TPM3-216ENST00000473036 ZNF697Q5TEC3 545 aa15.06■□□□□ 0
TPM3-216ENST00000473036 IQSEC1Q6DN90 963 aa15.06■□□□□ 0
TPM3-216ENST00000473036 SEPT14Q6ZU15 432 aa15.06■□□□□ 0
TPM3-216ENST00000473036 NSUN7Q8NE18 718 aaKnown RBP15.06■□□□□ 0
TPM3-216ENST00000473036 SMARCC2Q8TAQ2 1214 aa15.06■□□□□ 0
TPM3-216ENST00000473036 GUCD1Q96NT3 240 aa15.06■□□□□ 0
TPM3-216ENST00000473036 ZMYND12Q9H0C1 365 aa15.06■□□□□ 0
TPM3-216ENST00000473036 PCDHA6Q9UN73 950 aa15.06■□□□□ 0
TPM3-216ENST00000473036 PCDHA8Q9Y5H6 950 aa15.06■□□□□ 0
TPM3-216ENST00000473036 hCG_1984214I3L0E3 225 aa15.05■□□□□ -0
TPM3-216ENST00000473036 EIF3JO75822 258 aaKnown RBP15.05■□□□□ -0
TPM3-216ENST00000473036 ADCY7P51828 1080 aa15.05■□□□□ -0
TPM3-216ENST00000473036 BEX3Q00994 111 aa15.05■□□□□ -0
TPM3-216ENST00000473036 SP2Q02086 613 aa15.05■□□□□ -0
TPM3-216ENST00000473036 RABEP1Q15276 862 aa15.05■□□□□ -0
TPM3-216ENST00000473036 LY6KQ17RY6 165 aa15.05■□□□□ -0
TPM3-216ENST00000473036 DUSP28Q4G0W2 176 aa15.05■□□□□ -0
TPM3-216ENST00000473036 ZNF713Q8N859 430 aaPredicted RBP15.05■□□□□ -0
TPM3-216ENST00000473036 ARRDC4Q8NCT1 418 aa15.05■□□□□ -0
TPM3-216ENST00000473036 RASGRP4Q8TDF6 673 aa15.05■□□□□ -0
TPM3-216ENST00000473036 CUL5Q93034 780 aa15.05■□□□□ -0
TPM3-216ENST00000473036 SENP6Q9GZR1 1112 aaPredicted RBP15.05■□□□□ -0
TPM3-216ENST00000473036 LIMCH1Q9UPQ0 1083 aa15.05■□□□□ -0
TPM3-216ENST00000473036 TELO2Q9Y4R8 837 aa15.05■□□□□ -0
TPM3-216ENST00000473036 STK36Q9NRP7 1315 aa15.04■□□□□ -0
TPM3-216ENST00000473036 ESYT2A0FGR8 921 aa15.04■□□□□ -0
TPM3-216ENST00000473036 CPLX1O14810 134 aa15.04■□□□□ -0
TPM3-216ENST00000473036 DYNC1LI2O43237 492 aaPredicted RBP15.04■□□□□ -0
TPM3-216ENST00000473036 DEXIO95424 95 aa15.04■□□□□ -0
TPM3-216ENST00000473036 MYCNP04198 464 aaPredicted RBP15.04■□□□□ -0
TPM3-216ENST00000473036 JAKMIP3Q5VZ66 844 aa15.04■□□□□ -0
TPM3-216ENST00000473036 TLK2Q86UE8 772 aa15.04■□□□□ -0
TPM3-216ENST00000473036 CRYGNQ8WXF5 182 aa15.04■□□□□ -0
TPM3-216ENST00000473036 FERMT2Q96AC1 680 aa15.04■□□□□ -0
TPM3-216ENST00000473036 RTEL1Q9NZ71 1219 aa15.04■□□□□ -0
TPM3-216ENST00000473036 DDX41Q9UJV9 622 aaKnown RBP15.04■□□□□ -0
TPM3-216ENST00000473036 TMEM265A0A087WTH1 108 aa15.03■□□□□ -0
TPM3-216ENST00000473036 M0R2N6 131 aa15.03■□□□□ -0
TPM3-216ENST00000473036 C6orf222P0C671 652 aaPredicted RBP15.03■□□□□ -0
TPM3-216ENST00000473036 ITGB5P18084 799 aa15.03■□□□□ -0
TPM3-216ENST00000473036 CST5P28325 142 aaPredicted RBP15.03■□□□□ -0
TPM3-216ENST00000473036 CCND2P30279 289 aa15.03■□□□□ -0
TPM3-216ENST00000473036 MRPL12P52815 198 aaKnown RBP15.03■□□□□ -0
TPM3-216ENST00000473036 SMAD3P84022 425 aaKnown RBP15.03■□□□□ -0
TPM3-216ENST00000473036 AKAP17AQ02040 695 aaKnown RBP15.03■□□□□ -0
TPM3-216ENST00000473036 ARHGAP1Q07960 439 aa15.03■□□□□ -0
TPM3-216ENST00000473036 KCNA10Q16322 511 aa15.03■□□□□ -0
TPM3-216ENST00000473036 C1orf53Q5VUE5 145 aa15.03■□□□□ -0
TPM3-216ENST00000473036 PCNX4Q63HM2 1172 aa15.03■□□□□ -0
TPM3-216ENST00000473036 CCDC83Q8IWF9 413 aa15.03■□□□□ -0
TPM3-216ENST00000473036 CYP2W1Q8TAV3 490 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms