RNA–Protein interactions for RNA: ENST00000472348.1

PCOLCE-205, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 960 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-205ENST00000472348 TGFB3P10600 412 aa18.28■□□□□ 0.52
PCOLCE-205ENST00000472348 SETQ01105 290 aaPredicted RBP18.28■□□□□ 0.52
PCOLCE-205ENST00000472348 MYSM1Q5VVJ2 828 aa18.28■□□□□ 0.52
PCOLCE-205ENST00000472348 MCTP1Q6DN14 999 aa18.28■□□□□ 0.52
PCOLCE-205ENST00000472348 PIK3AP1Q6ZUJ8 805 aa18.28■□□□□ 0.52
PCOLCE-205ENST00000472348 CDHR1Q96JP9 859 aa18.28■□□□□ 0.52
PCOLCE-205ENST00000472348 INPP4AQ96PE3 977 aaPredicted RBP18.28■□□□□ 0.52
PCOLCE-205ENST00000472348 ARHGAP39Q9C0H5 1083 aa18.28■□□□□ 0.52
PCOLCE-205ENST00000472348 ABHD16BQ9H3Z7 469 aa18.28■□□□□ 0.52
PCOLCE-205ENST00000472348 TMEM260Q9NX78 707 aa18.28■□□□□ 0.52
PCOLCE-205ENST00000472348 LAD1O00515 517 aa18.27■□□□□ 0.52
PCOLCE-205ENST00000472348 ADAMTS3O15072 1205 aa18.27■□□□□ 0.52
PCOLCE-205ENST00000472348 TBX3O15119 743 aa18.27■□□□□ 0.52
PCOLCE-205ENST00000472348 ICAM3P32942 547 aa18.27■□□□□ 0.52
PCOLCE-205ENST00000472348 PRKCZQ05513 592 aa18.27■□□□□ 0.52
PCOLCE-205ENST00000472348 GNPTABQ3T906 1256 aa18.27■□□□□ 0.52
PCOLCE-205ENST00000472348 Q4G0T1 1027 aa18.27■□□□□ 0.52
PCOLCE-205ENST00000472348 OTOP1Q7RTM1 612 aa18.27■□□□□ 0.52
PCOLCE-205ENST00000472348 NPLOC4Q8TAT6 608 aa18.27■□□□□ 0.52
PCOLCE-205ENST00000472348 RASGRP4Q8TDF6 673 aa18.27■□□□□ 0.52
PCOLCE-205ENST00000472348 GPRASP2Q96D09 838 aa18.27■□□□□ 0.52
PCOLCE-205ENST00000472348 ABHD8Q96I13 439 aa18.27■□□□□ 0.52
PCOLCE-205ENST00000472348 VTA1Q9NP79 307 aa18.27■□□□□ 0.52
PCOLCE-205ENST00000472348 ZDHHC9Q9Y397 364 aa18.27■□□□□ 0.52
PCOLCE-205ENST00000472348 UBIAD1Q9Y5Z9 338 aa18.27■□□□□ 0.52
PCOLCE-205ENST00000472348 RBM47A0AV96 593 aaKnown RBP18.26■□□□□ 0.51
PCOLCE-205ENST00000472348 MEIS1O00470 390 aa18.26■□□□□ 0.51
PCOLCE-205ENST00000472348 PDE4DQ08499 809 aa18.26■□□□□ 0.51
PCOLCE-205ENST00000472348 INF2Q27J81 1249 aa18.26■□□□□ 0.51
PCOLCE-205ENST00000472348 CEP55Q53EZ4 464 aa18.26■□□□□ 0.51
PCOLCE-205ENST00000472348 CTU1Q7Z7A3 348 aaKnown RBP18.26■□□□□ 0.51
PCOLCE-205ENST00000472348 NLRX1Q86UT6 975 aa18.26■□□□□ 0.51
PCOLCE-205ENST00000472348 SLAIN1Q8ND83 568 aa18.26■□□□□ 0.51
PCOLCE-205ENST00000472348 MXRA8Q9BRK3 442 aa18.26■□□□□ 0.51
PCOLCE-205ENST00000472348 EDIL3O43854 480 aa18.25■□□□□ 0.51
PCOLCE-205ENST00000472348 EIF2AK2P19525 551 aaKnown RBP18.25■□□□□ 0.51
PCOLCE-205ENST00000472348 MRPS9P82933 396 aaKnown RBP18.25■□□□□ 0.51
PCOLCE-205ENST00000472348 CAP1Q01518 475 aa18.25■□□□□ 0.51
PCOLCE-205ENST00000472348 PKP1Q13835 747 aa18.25■□□□□ 0.51
PCOLCE-205ENST00000472348 EARS2Q5JPH6 523 aaKnown RBP18.25■□□□□ 0.51
PCOLCE-205ENST00000472348 ARMCX2Q7L311 632 aa18.25■□□□□ 0.51
PCOLCE-205ENST00000472348 ZNF396Q96N95 335 aaPredicted RBP18.25■□□□□ 0.51
PCOLCE-205ENST00000472348 SENP7Q9BQF6 1050 aa18.25■□□□□ 0.51
PCOLCE-205ENST00000472348 JADE2Q9NQC1 790 aa18.25■□□□□ 0.51
PCOLCE-205ENST00000472348 POLR3EQ9NVU0 708 aa18.25■□□□□ 0.51
PCOLCE-205ENST00000472348 GABRQQ9UN88 632 aa18.25■□□□□ 0.51
PCOLCE-205ENST00000472348 CEP131Q9UPN4 1083 aa18.25■□□□□ 0.51
PCOLCE-205ENST00000472348 IGLV3-22A0A075B6J6 115 aa18.24■□□□□ 0.51
PCOLCE-205ENST00000472348 CYP2B6P20813 491 aa18.24■□□□□ 0.51
PCOLCE-205ENST00000472348 FOSBP53539 338 aa18.24■□□□□ 0.51
PCOLCE-205ENST00000472348 MFSD14CQ5VZR4 134 aa18.24■□□□□ 0.51
PCOLCE-205ENST00000472348 KATNBL1Q9H079 304 aa18.24■□□□□ 0.51
PCOLCE-205ENST00000472348 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.24■□□□□ 0.51
PCOLCE-205ENST00000472348 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.24■□□□□ 0.51
PCOLCE-205ENST00000472348 CFAP45Q9UL16 551 aa18.24■□□□□ 0.51
PCOLCE-205ENST00000472348 PTPN22Q9Y2R2 807 aa18.24■□□□□ 0.51
PCOLCE-205ENST00000472348 TRIM17Q9Y577 477 aa18.24■□□□□ 0.51
PCOLCE-205ENST00000472348 TCHHQ07283 1943 aa18.23■□□□□ 0.51
PCOLCE-205ENST00000472348 FIBPO43427 364 aa18.23■□□□□ 0.51
PCOLCE-205ENST00000472348 SNAI1O95863 264 aaPredicted RBP18.23■□□□□ 0.51
PCOLCE-205ENST00000472348 HMGCRP04035 888 aa18.23■□□□□ 0.51
PCOLCE-205ENST00000472348 TOB1P50616 345 aaPredicted RBP18.23■□□□□ 0.51
PCOLCE-205ENST00000472348 TTC38Q5R3I4 469 aa18.23■□□□□ 0.51
PCOLCE-205ENST00000472348 CLEC17AQ6ZS10 378 aa18.23■□□□□ 0.51
PCOLCE-205ENST00000472348 FERMT3Q86UX7 667 aa18.23■□□□□ 0.51
PCOLCE-205ENST00000472348 GIMAP8Q8ND71 665 aaPredicted RBP18.23■□□□□ 0.51
PCOLCE-205ENST00000472348 RAET1EQ8TD07 263 aa18.23■□□□□ 0.51
PCOLCE-205ENST00000472348 FAM20AQ96MK3 541 aa18.23■□□□□ 0.51
PCOLCE-205ENST00000472348 PURBQ96QR8 312 aaKnown RBP18.23■□□□□ 0.51
PCOLCE-205ENST00000472348 CNPY2Q9Y2B0 182 aa18.23■□□□□ 0.51
PCOLCE-205ENST00000472348 SPATA31C2B4DYI2 1134 aa18.22■□□□□ 0.51
PCOLCE-205ENST00000472348 NKRFO15226 690 aaKnown RBP eCLIP18.22■□□□□ 0.51
PCOLCE-205ENST00000472348 ADCY3O60266 1144 aa18.22■□□□□ 0.51
PCOLCE-205ENST00000472348 CAPN2P17655 700 aa18.22■□□□□ 0.51
PCOLCE-205ENST00000472348 ZNF76P36508 570 aa18.22■□□□□ 0.51
PCOLCE-205ENST00000472348 PRPHP41219 470 aa18.22■□□□□ 0.51
PCOLCE-205ENST00000472348 LETM2Q2VYF4 491 aa18.22■□□□□ 0.51
PCOLCE-205ENST00000472348 MAP3K21Q5TCX8 1036 aa18.22■□□□□ 0.51
PCOLCE-205ENST00000472348 ARL6IP4Q66PJ3 421 aaKnown RBP18.22■□□□□ 0.51
PCOLCE-205ENST00000472348 IQSEC1Q6DN90 963 aa18.22■□□□□ 0.51
PCOLCE-205ENST00000472348 IL31RAQ8NI17 732 aa18.22■□□□□ 0.51
PCOLCE-205ENST00000472348 SCFD2Q8WU76 684 aa18.22■□□□□ 0.51
PCOLCE-205ENST00000472348 LENG9Q96B70 501 aa18.22■□□□□ 0.51
PCOLCE-205ENST00000472348 PGBD1Q96JS3 809 aa18.22■□□□□ 0.51
PCOLCE-205ENST00000472348 FAM86B1E9PN63 330 aa18.21■□□□□ 0.51
PCOLCE-205ENST00000472348 CCNT1O60563 726 aaKnown RBP18.21■□□□□ 0.51
PCOLCE-205ENST00000472348 RGS20O76081 388 aa18.21■□□□□ 0.51
PCOLCE-205ENST00000472348 ECM2O94769 699 aaPredicted RBP18.21■□□□□ 0.51
PCOLCE-205ENST00000472348 YEATS4O95619 227 aa18.21■□□□□ 0.51
PCOLCE-205ENST00000472348 FAM86B2P0C5J1 330 aa18.21■□□□□ 0.51
PCOLCE-205ENST00000472348 ITGB5P18084 799 aa18.21■□□□□ 0.51
PCOLCE-205ENST00000472348 NASPP49321 788 aaPredicted RBP18.21■□□□□ 0.51
PCOLCE-205ENST00000472348 MTMR1Q13613 665 aa18.21■□□□□ 0.51
PCOLCE-205ENST00000472348 FBXO46Q6PJ61 603 aaPredicted RBP18.21■□□□□ 0.51
PCOLCE-205ENST00000472348 SLFN12Q8IYM2 578 aa18.21■□□□□ 0.51
PCOLCE-205ENST00000472348 TRIB2Q92519 343 aa18.21■□□□□ 0.51
PCOLCE-205ENST00000472348 KCNMB3Q9NPA1 279 aa18.21■□□□□ 0.51
PCOLCE-205ENST00000472348 RTEL1Q9NZ71 1219 aa18.21■□□□□ 0.51
PCOLCE-205ENST00000472348 FLRT1Q9NZU1 646 aa18.21■□□□□ 0.51
PCOLCE-205ENST00000472348 DDX25Q9UHL0 483 aaKnown RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms