RNA–Protein interactions for RNA: ENST00000472318.1

SCAF4-205, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 3

Gene SCAF4, Length 796 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-205ENST00000472318 CCDC93Q567U6 631 aa9.03□□□□□ -0.96
SCAF4-205ENST00000472318 TAF7LQ5H9L4 462 aa9.03□□□□□ -0.96
SCAF4-205ENST00000472318 SOGA3Q5TF21 947 aa9.03□□□□□ -0.96
SCAF4-205ENST00000472318 STYK1Q6J9G0 422 aa9.03□□□□□ -0.96
SCAF4-205ENST00000472318 NOL8Q76FK4 1167 aaKnown RBP9.03□□□□□ -0.96
SCAF4-205ENST00000472318 SYNE4Q8N205 404 aa9.03□□□□□ -0.96
SCAF4-205ENST00000472318 GIPC2Q8TF65 315 aa9.03□□□□□ -0.96
SCAF4-205ENST00000472318 NOC4LQ9BVI4 516 aaKnown RBP9.03□□□□□ -0.96
SCAF4-205ENST00000472318 GLIS2Q9BZE0 524 aaPredicted RBP9.03□□□□□ -0.96
SCAF4-205ENST00000472318 SEMA3GQ9NS98 782 aa9.03□□□□□ -0.96
SCAF4-205ENST00000472318 CAPN6Q9Y6Q1 641 aa9.03□□□□□ -0.96
SCAF4-205ENST00000472318 CENPFP49454 3210 aa9.03□□□□□ -0.96
SCAF4-205ENST00000472318 COL15A1P39059 1388 aa9.02□□□□□ -0.97
SCAF4-205ENST00000472318 UNC80Q8N2C7 3258 aa9.02□□□□□ -0.97
SCAF4-205ENST00000472318 C8AP07357 584 aa9.02□□□□□ -0.97
SCAF4-205ENST00000472318 RLBP1P12271 317 aa9.02□□□□□ -0.97
SCAF4-205ENST00000472318 KIF23Q02241 960 aaPredicted RBP9.02□□□□□ -0.97
SCAF4-205ENST00000472318 TBC1D9BQ66K14 1250 aa9.02□□□□□ -0.97
SCAF4-205ENST00000472318 USP50Q70EL3 339 aaPredicted RBP9.02□□□□□ -0.97
SCAF4-205ENST00000472318 TMC4Q7Z404 712 aa9.02□□□□□ -0.97
SCAF4-205ENST00000472318 FBXO33Q7Z6M2 555 aa9.02□□□□□ -0.97
SCAF4-205ENST00000472318 MRPL41Q8IXM3 137 aaKnown RBP9.02□□□□□ -0.97
SCAF4-205ENST00000472318 RIN3Q8TB24 985 aa9.02□□□□□ -0.97
SCAF4-205ENST00000472318 ZNF408Q9H9D4 720 aa9.02□□□□□ -0.97
SCAF4-205ENST00000472318 LMCD1Q9NZU5 365 aa9.02□□□□□ -0.97
SCAF4-205ENST00000472318 ZBTB1Q9Y2K1 713 aa9.02□□□□□ -0.97
SCAF4-205ENST00000472318 ST14Q9Y5Y6 855 aa9.02□□□□□ -0.97
SCAF4-205ENST00000472318 SPTBN5Q9NRC6 3674 aaKnown RBP9.01□□□□□ -0.97
SCAF4-205ENST00000472318 SLX4Q8IY92 1834 aa9.01□□□□□ -0.97
SCAF4-205ENST00000472318 CTSHP09668 335 aa9.01□□□□□ -0.97
SCAF4-205ENST00000472318 CYP19A1P11511 503 aaPredicted RBP9.01□□□□□ -0.97
SCAF4-205ENST00000472318 IARSP41252 1262 aaKnown RBP9.01□□□□□ -0.97
SCAF4-205ENST00000472318 PSMD2Q13200 908 aa9.01□□□□□ -0.97
SCAF4-205ENST00000472318 TSNAXIP1Q2TAA8 658 aa9.01□□□□□ -0.97
SCAF4-205ENST00000472318 NAALADL2Q58DX5 795 aa9.01□□□□□ -0.97
SCAF4-205ENST00000472318 DLK2Q6UY11 383 aa9.01□□□□□ -0.97
SCAF4-205ENST00000472318 COX4I2Q96KJ9 171 aa9.01□□□□□ -0.97
SCAF4-205ENST00000472318 HSPA12BQ96MM6 686 aa9.01□□□□□ -0.97
SCAF4-205ENST00000472318 TJP2Q9UDY2 1190 aa9.01□□□□□ -0.97
SCAF4-205ENST00000472318 VCANP13611 3396 aa9.01□□□□□ -0.97
SCAF4-205ENST00000472318 COL4A5P29400 1685 aa9□□□□□ -0.97
SCAF4-205ENST00000472318 ROCK2O75116 1388 aaKnown RBP9□□□□□ -0.97
SCAF4-205ENST00000472318 ANKRD31Q8N7Z5 1873 aa9□□□□□ -0.97
SCAF4-205ENST00000472318 TJP1Q07157 1748 aa9□□□□□ -0.97
SCAF4-205ENST00000472318 CLSTN1O94985 981 aa9□□□□□ -0.97
SCAF4-205ENST00000472318 VAMP1P23763 118 aa9□□□□□ -0.97
SCAF4-205ENST00000472318 HUNKP57058 714 aa9□□□□□ -0.97
SCAF4-205ENST00000472318 RPL6Q02878 288 aaKnown RBP9□□□□□ -0.97
SCAF4-205ENST00000472318 TAF1CQ15572 869 aaPredicted RBP9□□□□□ -0.97
SCAF4-205ENST00000472318 TMEM40Q8WWA1 233 aa9□□□□□ -0.97
SCAF4-205ENST00000472318 MASTLQ96GX5 879 aa9□□□□□ -0.97
SCAF4-205ENST00000472318 KIF24Q5T7B8 1368 aa8.99□□□□□ -0.97
SCAF4-205ENST00000472318 PGRP06401 933 aa8.99□□□□□ -0.97
SCAF4-205ENST00000472318 THAP5Q7Z6K1 395 aa8.99□□□□□ -0.97
SCAF4-205ENST00000472318 PHC3Q8NDX5 983 aa8.99□□□□□ -0.97
SCAF4-205ENST00000472318 ATP13A1Q9HD20 1204 aa8.99□□□□□ -0.97
SCAF4-205ENST00000472318 CTNND2Q9UQB3 1225 aa8.99□□□□□ -0.97
SCAF4-205ENST00000472318 TLR6Q9Y2C9 796 aa8.99□□□□□ -0.97
SCAF4-205ENST00000472318 LAMA3Q16787 3333 aa8.98□□□□□ -0.97
SCAF4-205ENST00000472318 TRIOBPQ9H2D6 2365 aa8.98□□□□□ -0.97
SCAF4-205ENST00000472318 KIR3DL1P43629 444 aa8.98□□□□□ -0.97
SCAF4-205ENST00000472318 EIF6P56537 245 aaKnown RBP8.98□□□□□ -0.97
SCAF4-205ENST00000472318 JAG1P78504 1218 aa8.98□□□□□ -0.97
SCAF4-205ENST00000472318 PKN2Q16513 984 aaKnown RBP8.98□□□□□ -0.97
SCAF4-205ENST00000472318 SLC6A19Q695T7 634 aa8.98□□□□□ -0.97
SCAF4-205ENST00000472318 ZSWIM9Q86XI8 627 aa8.98□□□□□ -0.97
SCAF4-205ENST00000472318 XAGE3Q8WTP9 111 aa8.98□□□□□ -0.97
SCAF4-205ENST00000472318 CRELD1Q96HD1 420 aa8.98□□□□□ -0.97
SCAF4-205ENST00000472318 TMEM87BQ96K49 555 aa8.98□□□□□ -0.97
SCAF4-205ENST00000472318 DPH2Q9BQC3 489 aaPredicted RBP8.98□□□□□ -0.97
SCAF4-205ENST00000472318 CARS2Q9HA77 564 aaKnown RBP8.98□□□□□ -0.97
SCAF4-205ENST00000472318 ADAM30Q9UKF2 790 aa8.98□□□□□ -0.97
SCAF4-205ENST00000472318 H3BS24 57 aa8.97□□□□□ -0.97
SCAF4-205ENST00000472318 HSP90AB1P08238 724 aaKnown RBP8.97□□□□□ -0.97
SCAF4-205ENST00000472318 CYP7A1P22680 504 aa8.97□□□□□ -0.97
SCAF4-205ENST00000472318 PDE4BQ07343 736 aa8.97□□□□□ -0.97
SCAF4-205ENST00000472318 CDKAL1Q5VV42 579 aa8.97□□□□□ -0.97
SCAF4-205ENST00000472318 RGMBQ6NW40 437 aa8.97□□□□□ -0.97
SCAF4-205ENST00000472318 CCDC84Q86UT8 332 aaPredicted RBP8.97□□□□□ -0.97
SCAF4-205ENST00000472318 TICAM2Q86XR7 235 aa8.97□□□□□ -0.97
SCAF4-205ENST00000472318 MCATQ8IVS2 390 aaKnown RBP8.97□□□□□ -0.97
SCAF4-205ENST00000472318 ZNF296Q8WUU4 475 aaPredicted RBP8.97□□□□□ -0.97
SCAF4-205ENST00000472318 JDP2Q8WYK2 163 aa8.97□□□□□ -0.97
SCAF4-205ENST00000472318 FAM161BQ96MY7 647 aa8.97□□□□□ -0.97
SCAF4-205ENST00000472318 ADARB2Q9NS39 739 aaKnown RBP8.97□□□□□ -0.97
SCAF4-205ENST00000472318 BCCIPQ9P287 314 aaKnown RBP eCLIP8.97□□□□□ -0.97
SCAF4-205ENST00000472318 PGAP2Q9UHJ9 254 aa8.97□□□□□ -0.97
SCAF4-205ENST00000472318 SNED1Q8TER0 1413 aa8.97□□□□□ -0.97
SCAF4-205ENST00000472318 TRPM7Q96QT4 1865 aa8.96□□□□□ -0.97
SCAF4-205ENST00000472318 ARID1BQ8NFD5 2236 aaPredicted RBP8.96□□□□□ -0.97
SCAF4-205ENST00000472318 ST20-MTHFSA0A0A6YYL1 179 aa8.96□□□□□ -0.98
SCAF4-205ENST00000472318 MARCH6O60337 910 aa8.96□□□□□ -0.98
SCAF4-205ENST00000472318 MTHFSP49914 203 aa8.96□□□□□ -0.98
SCAF4-205ENST00000472318 ZNF648Q5T619 568 aaPredicted RBP8.96□□□□□ -0.98
SCAF4-205ENST00000472318 FBXO46Q6PJ61 603 aaPredicted RBP8.96□□□□□ -0.98
SCAF4-205ENST00000472318 RTKN2Q8IZC4 609 aa8.96□□□□□ -0.98
SCAF4-205ENST00000472318 CNBD1Q8NA66 436 aa8.96□□□□□ -0.98
SCAF4-205ENST00000472318 ACSF2Q96CM8 615 aaPredicted RBP8.96□□□□□ -0.98
SCAF4-205ENST00000472318 GPRC5DQ9NZD1 345 aa8.96□□□□□ -0.98
SCAF4-205ENST00000472318 HDAC9Q9UKV0 1011 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms