RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 DUSP28Q4G0W2 176 aa17.4■□□□□ 0.38
CALD1-215ENST00000472096 C1orf53Q5VUE5 145 aa17.4■□□□□ 0.38
CALD1-215ENST00000472096 ARHGEF16Q5VV41 709 aa17.4■□□□□ 0.38
CALD1-215ENST00000472096 SCFD2Q8WU76 684 aa17.4■□□□□ 0.38
CALD1-215ENST00000472096 BRF1Q92994 677 aa17.4■□□□□ 0.38
CALD1-215ENST00000472096 IWS1Q96ST2 819 aa17.4■□□□□ 0.38
CALD1-215ENST00000472096 WDR11Q9BZH6 1224 aa17.4■□□□□ 0.38
CALD1-215ENST00000472096 ATP11BQ9Y2G3 1177 aa17.4■□□□□ 0.38
CALD1-215ENST00000472096 Q9Y3F1 56 aa17.4■□□□□ 0.38
CALD1-215ENST00000472096 SCN10AQ9Y5Y9 1956 aa17.4■□□□□ 0.38
CALD1-215ENST00000472096 DYNC1LI2O43237 492 aaPredicted RBP17.39■□□□□ 0.37
CALD1-215ENST00000472096 ASGR1P07306 291 aa17.39■□□□□ 0.37
CALD1-215ENST00000472096 SYN1P17600 705 aa17.39■□□□□ 0.37
CALD1-215ENST00000472096 BEX3Q00994 111 aa17.39■□□□□ 0.37
CALD1-215ENST00000472096 APOBRQ0VD83 1088 aa17.39■□□□□ 0.37
CALD1-215ENST00000472096 PPP2R5BQ15173 497 aa17.39■□□□□ 0.37
CALD1-215ENST00000472096 FSCN1Q16658 493 aaKnown RBP17.39■□□□□ 0.37
CALD1-215ENST00000472096 GNASQ5JWF2 1037 aa17.39■□□□□ 0.37
CALD1-215ENST00000472096 FBXL16Q8N461 479 aa17.39■□□□□ 0.37
CALD1-215ENST00000472096 CCDC82Q8N4S0 544 aa17.39■□□□□ 0.37
CALD1-215ENST00000472096 AGXT2Q9BYV1 514 aa17.39■□□□□ 0.37
CALD1-215ENST00000472096 AP5M1Q9H0R1 490 aa17.39■□□□□ 0.37
CALD1-215ENST00000472096 STARD7Q9NQZ5 370 aa17.39■□□□□ 0.37
CALD1-215ENST00000472096 TRIOBPQ9H2D6 2365 aa17.39■□□□□ 0.37
CALD1-215ENST00000472096 hCG_1642624A0A1W2PR95 340 aa17.38■□□□□ 0.37
CALD1-215ENST00000472096 NR3C2P08235 984 aa17.38■□□□□ 0.37
CALD1-215ENST00000472096 FUT2Q10981 343 aa17.38■□□□□ 0.37
CALD1-215ENST00000472096 STXBP2Q15833 593 aa17.38■□□□□ 0.37
CALD1-215ENST00000472096 PDCD2LQ9BRP1 358 aa17.38■□□□□ 0.37
CALD1-215ENST00000472096 FAM217BQ9NTX9 383 aaPredicted RBP17.38■□□□□ 0.37
CALD1-215ENST00000472096 WDR70Q9NW82 654 aa17.38■□□□□ 0.37
CALD1-215ENST00000472096 NAP1L2Q9ULW6 460 aaPredicted RBP17.38■□□□□ 0.37
CALD1-215ENST00000472096 COLQQ9Y215 455 aaPredicted RBP17.38■□□□□ 0.37
CALD1-215ENST00000472096 FRMPD4Q14CM0 1322 aa17.38■□□□□ 0.37
CALD1-215ENST00000472096 NKRFO15226 690 aaKnown RBP eCLIP17.37■□□□□ 0.37
CALD1-215ENST00000472096 ARIH2O95376 493 aa17.37■□□□□ 0.37
CALD1-215ENST00000472096 CDC27P30260 824 aa17.37■□□□□ 0.37
CALD1-215ENST00000472096 METAP2P50579 478 aaKnown RBP eCLIP17.37■□□□□ 0.37
CALD1-215ENST00000472096 TTLL4Q14679 1199 aa17.37■□□□□ 0.37
CALD1-215ENST00000472096 PGM5Q15124 567 aa17.37■□□□□ 0.37
CALD1-215ENST00000472096 RUFY3Q7L099 469 aa17.37■□□□□ 0.37
CALD1-215ENST00000472096 FCHSD1Q86WN1 690 aa17.37■□□□□ 0.37
CALD1-215ENST00000472096 IL31RAQ8NI17 732 aa17.37■□□□□ 0.37
CALD1-215ENST00000472096 GLT1D1Q96MS3 346 aa17.37■□□□□ 0.37
CALD1-215ENST00000472096 PRO3102Q9H379 93 aa17.37■□□□□ 0.37
CALD1-215ENST00000472096 ZSWIM6Q9HCJ5 1215 aa17.37■□□□□ 0.37
CALD1-215ENST00000472096 PCDH10Q9P2E7 1040 aa17.37■□□□□ 0.37
CALD1-215ENST00000472096 PIK3CDO00329 1044 aa17.36■□□□□ 0.37
CALD1-215ENST00000472096 SEC24BO95487 1268 aa17.36■□□□□ 0.37
CALD1-215ENST00000472096 TXNP10599 105 aaKnown RBP17.36■□□□□ 0.37
CALD1-215ENST00000472096 SEPT14Q6ZU15 432 aa17.36■□□□□ 0.37
CALD1-215ENST00000472096 HEATR3Q7Z4Q2 680 aa17.36■□□□□ 0.37
CALD1-215ENST00000472096 OR6J1Q8NGC5 347 aa17.36■□□□□ 0.37
CALD1-215ENST00000472096 COPS5Q92905 334 aa17.36■□□□□ 0.37
CALD1-215ENST00000472096 GPKOWQ92917 476 aaPredicted RBP eCLIP17.36■□□□□ 0.37
CALD1-215ENST00000472096 TM6SF1Q9BZW5 370 aa17.36■□□□□ 0.37
CALD1-215ENST00000472096 CYP46A1Q9Y6A2 500 aa17.36■□□□□ 0.37
CALD1-215ENST00000472096 ELP1O95163 1332 aa17.36■□□□□ 0.37
CALD1-215ENST00000472096 ZEB2O60315 1214 aa17.35■□□□□ 0.37
CALD1-215ENST00000472096 EIF3JO75822 258 aaKnown RBP17.35■□□□□ 0.37
CALD1-215ENST00000472096 MYCLP12524 364 aaPredicted RBP17.35■□□□□ 0.37
CALD1-215ENST00000472096 TLE2Q04725 743 aa17.35■□□□□ 0.37
CALD1-215ENST00000472096 TOB2Q14106 344 aaPredicted RBP17.35■□□□□ 0.37
CALD1-215ENST00000472096 WWC2Q6AWC2 1192 aa17.35■□□□□ 0.37
CALD1-215ENST00000472096 CCDC62Q6P9F0 684 aa17.35■□□□□ 0.37
CALD1-215ENST00000472096 CXCL17Q6UXB2 119 aa17.35■□□□□ 0.37
CALD1-215ENST00000472096 SMARCC2Q8TAQ2 1214 aa17.35■□□□□ 0.37
CALD1-215ENST00000472096 SLC39A7Q92504 469 aa17.35■□□□□ 0.37
CALD1-215ENST00000472096 CUL5Q93034 780 aa17.35■□□□□ 0.37
CALD1-215ENST00000472096 GDF15Q99988 308 aa17.35■□□□□ 0.37
CALD1-215ENST00000472096 UPF3BQ9BZI7 483 aaKnown RBP17.35■□□□□ 0.37
CALD1-215ENST00000472096 PDLIM7Q9NR12 457 aa17.35■□□□□ 0.37
CALD1-215ENST00000472096 RBM27Q9P2N5 1060 aaKnown RBP17.35■□□□□ 0.37
CALD1-215ENST00000472096 A0A0U1RQG5 324 aaPredicted RBP17.34■□□□□ 0.37
CALD1-215ENST00000472096 MEIS2O14770 477 aa17.34■□□□□ 0.37
CALD1-215ENST00000472096 PQBP1O60828 265 aaKnown RBP17.34■□□□□ 0.37
CALD1-215ENST00000472096 CABYRO75952 493 aa17.34■□□□□ 0.37
CALD1-215ENST00000472096 CCND2P30279 289 aa17.34■□□□□ 0.37
CALD1-215ENST00000472096 MAGEA10P43363 369 aaPredicted RBP17.34■□□□□ 0.37
CALD1-215ENST00000472096 CPT1AP50416 773 aa17.34■□□□□ 0.37
CALD1-215ENST00000472096 EVCP57679 992 aa17.34■□□□□ 0.37
CALD1-215ENST00000472096 HABP4Q5JVS0 413 aaKnown RBP17.34■□□□□ 0.37
CALD1-215ENST00000472096 USP17L6PQ6QN14 398 aa17.34■□□□□ 0.37
CALD1-215ENST00000472096 PRDM5Q9NQX1 630 aaPredicted RBP17.34■□□□□ 0.37
CALD1-215ENST00000472096 RANBP2P49792 3224 aaKnown RBP17.34■□□□□ 0.37
CALD1-215ENST00000472096 MROH7Q68CQ1 1323 aa17.33■□□□□ 0.36
CALD1-215ENST00000472096 CCDC196A0A1B0GTZ2 297 aa17.33■□□□□ 0.36
CALD1-215ENST00000472096 hCG_1984214I3L0E3 225 aa17.33■□□□□ 0.36
CALD1-215ENST00000472096 RGS20O76081 388 aa17.33■□□□□ 0.36
CALD1-215ENST00000472096 CLTBP09497 229 aa17.33■□□□□ 0.36
CALD1-215ENST00000472096 ADD1P35611 737 aaKnown RBP17.33■□□□□ 0.36
CALD1-215ENST00000472096 LY6KQ17RY6 165 aa17.33■□□□□ 0.36
CALD1-215ENST00000472096 PPP1R18Q6NYC8 613 aa17.33■□□□□ 0.36
CALD1-215ENST00000472096 ANKRD33Q7Z3H0 272 aa17.33■□□□□ 0.36
CALD1-215ENST00000472096 VSIG10LQ86VR7 867 aa17.33■□□□□ 0.36
CALD1-215ENST00000472096 ZNF713Q8N859 430 aaPredicted RBP17.33■□□□□ 0.36
CALD1-215ENST00000472096 VTI1AQ96AJ9 217 aa17.33■□□□□ 0.36
CALD1-215ENST00000472096 PSTPIP2Q9H939 334 aa17.33■□□□□ 0.36
CALD1-215ENST00000472096 PRKAG2Q9UGJ0 569 aa17.33■□□□□ 0.36
CALD1-215ENST00000472096 MRVI1Q9Y6F6 885 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms