RNA–Protein interactions for RNA: ENST00000471862.1

COL4A3-205, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-205ENST00000471862 PLEKHA8P1O95397 391 aa13.34□□□□□ -0.27
COL4A3-205ENST00000471862 POLR2MP0CAP2 368 aa13.34□□□□□ -0.27
COL4A3-205ENST00000471862 KIF5BP33176 963 aa13.34□□□□□ -0.27
COL4A3-205ENST00000471862 NBPF20Q3BBV1 942 aa13.34□□□□□ -0.27
COL4A3-205ENST00000471862 TSGA10IPQ3SY00 556 aa13.34□□□□□ -0.27
COL4A3-205ENST00000471862 NFRKBQ6P4R8 1299 aa13.34□□□□□ -0.27
COL4A3-205ENST00000471862 SGMS1Q86VZ5 419 aa13.34□□□□□ -0.27
COL4A3-205ENST00000471862 SRBD1Q8N5C6 995 aaKnown RBP13.34□□□□□ -0.27
COL4A3-205ENST00000471862 AFG1LQ8WV93 481 aa13.34□□□□□ -0.27
COL4A3-205ENST00000471862 VWCEQ96DN2 955 aa13.34□□□□□ -0.27
COL4A3-205ENST00000471862 IL23AQ9NPF7 189 aa13.34□□□□□ -0.27
COL4A3-205ENST00000471862 TRMT13Q9NUP7 481 aaKnown RBP13.34□□□□□ -0.27
COL4A3-205ENST00000471862 CCDC69A6NI79 296 aa13.33□□□□□ -0.28
COL4A3-205ENST00000471862 SUPT20HL2P0C7V6 817 aa13.33□□□□□ -0.28
COL4A3-205ENST00000471862 GNAQP50148 359 aa13.33□□□□□ -0.28
COL4A3-205ENST00000471862 PTPN11Q06124 597 aaPredicted RBP13.33□□□□□ -0.28
COL4A3-205ENST00000471862 ZNF697Q5TEC3 545 aa13.33□□□□□ -0.28
COL4A3-205ENST00000471862 PSRC1Q6PGN9 363 aaPredicted RBP13.33□□□□□ -0.28
COL4A3-205ENST00000471862 ZNF365Q70YC5 407 aa13.33□□□□□ -0.28
COL4A3-205ENST00000471862 KAT2BQ92831 832 aa13.33□□□□□ -0.28
COL4A3-205ENST00000471862 LZTS2Q9BRK4 669 aa13.33□□□□□ -0.28
COL4A3-205ENST00000471862 LRRC2Q9BYS8 371 aa13.33□□□□□ -0.28
COL4A3-205ENST00000471862 TTYH1Q9H313 450 aaPredicted RBP13.33□□□□□ -0.28
COL4A3-205ENST00000471862 MRVI1Q9Y6F6 885 aa13.33□□□□□ -0.28
COL4A3-205ENST00000471862 CDH23Q9H251 3354 aa13.33□□□□□ -0.28
COL4A3-205ENST00000471862 TRIP12Q14669 1992 aaPredicted RBP13.32□□□□□ -0.28
COL4A3-205ENST00000471862 TMEM265A0A087WTH1 108 aa13.32□□□□□ -0.28
COL4A3-205ENST00000471862 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.32□□□□□ -0.28
COL4A3-205ENST00000471862 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.32□□□□□ -0.28
COL4A3-205ENST00000471862 CALM1P0DP23 149 aa13.32□□□□□ -0.28
COL4A3-205ENST00000471862 CALM2P0DP24 149 aa13.32□□□□□ -0.28
COL4A3-205ENST00000471862 CALM3P0DP25 149 aa13.32□□□□□ -0.28
COL4A3-205ENST00000471862 ACRP10323 421 aa13.32□□□□□ -0.28
COL4A3-205ENST00000471862 CYP2C9P11712 490 aa13.32□□□□□ -0.28
COL4A3-205ENST00000471862 MYCLP12524 364 aaPredicted RBP13.32□□□□□ -0.28
COL4A3-205ENST00000471862 HOXD8P13378 290 aaPredicted RBP13.32□□□□□ -0.28
COL4A3-205ENST00000471862 RXRAP19793 462 aa13.32□□□□□ -0.28
COL4A3-205ENST00000471862 CCND2P30279 289 aa13.32□□□□□ -0.28
COL4A3-205ENST00000471862 CCL23P55773 120 aa13.32□□□□□ -0.28
COL4A3-205ENST00000471862 EXOSC10Q01780 885 aaKnown RBP13.32□□□□□ -0.28
COL4A3-205ENST00000471862 RNF20Q5VTR2 975 aa13.32□□□□□ -0.28
COL4A3-205ENST00000471862 NFXL1Q6ZNB6 911 aa13.32□□□□□ -0.28
COL4A3-205ENST00000471862 SESTD1Q86VW0 696 aa13.32□□□□□ -0.28
COL4A3-205ENST00000471862 FCHSD1Q86WN1 690 aa13.32□□□□□ -0.28
COL4A3-205ENST00000471862 RASEFQ8IZ41 740 aa13.32□□□□□ -0.28
COL4A3-205ENST00000471862 PPTC7Q8NI37 304 aa13.32□□□□□ -0.28
COL4A3-205ENST00000471862 PPP1R13LQ8WUF5 828 aa13.32□□□□□ -0.28
COL4A3-205ENST00000471862 PIBF1Q8WXW3 757 aa13.32□□□□□ -0.28
COL4A3-205ENST00000471862 HERVK_113Q902F9 699 aa13.32□□□□□ -0.28
COL4A3-205ENST00000471862 RRP36Q96EU6 259 aaKnown RBP13.32□□□□□ -0.28
COL4A3-205ENST00000471862 CTAGE1Q96RT6 745 aa13.32□□□□□ -0.28
COL4A3-205ENST00000471862 GBF1Q92538 1859 aa13.31□□□□□ -0.28
COL4A3-205ENST00000471862 DOCK5Q9H7D0 1870 aa13.31□□□□□ -0.28
COL4A3-205ENST00000471862 HAS3O00219 553 aa13.31□□□□□ -0.28
COL4A3-205ENST00000471862 PIK3CDO00329 1044 aa13.31□□□□□ -0.28
COL4A3-205ENST00000471862 MEIS2O14770 477 aa13.31□□□□□ -0.28
COL4A3-205ENST00000471862 CASTP20810 708 aaKnown RBP13.31□□□□□ -0.28
COL4A3-205ENST00000471862 MRPS9P82933 396 aaKnown RBP13.31□□□□□ -0.28
COL4A3-205ENST00000471862 SP2Q02086 613 aa13.31□□□□□ -0.28
COL4A3-205ENST00000471862 LAMC2Q13753 1193 aa13.31□□□□□ -0.28
COL4A3-205ENST00000471862 ADCK5Q3MIX3 580 aa13.31□□□□□ -0.28
COL4A3-205ENST00000471862 FAM47CQ5HY64 1035 aa13.31□□□□□ -0.28
COL4A3-205ENST00000471862 MYSM1Q5VVJ2 828 aa13.31□□□□□ -0.28
COL4A3-205ENST00000471862 KCNV1Q6PIU1 500 aa13.31□□□□□ -0.28
COL4A3-205ENST00000471862 TMTC3Q6ZXV5 915 aa13.31□□□□□ -0.28
COL4A3-205ENST00000471862 RAB11FIP4Q86YS3 637 aa13.31□□□□□ -0.28
COL4A3-205ENST00000471862 GPKOWQ92917 476 aaPredicted RBP eCLIP13.31□□□□□ -0.28
COL4A3-205ENST00000471862 KCNB2Q92953 911 aa13.31□□□□□ -0.28
COL4A3-205ENST00000471862 SCLYQ96I15 445 aa13.31□□□□□ -0.28
COL4A3-205ENST00000471862 CCDC136Q96JN2 1154 aa13.31□□□□□ -0.28
COL4A3-205ENST00000471862 FAM161BQ96MY7 647 aa13.31□□□□□ -0.28
COL4A3-205ENST00000471862 INPP4AQ96PE3 977 aaPredicted RBP13.31□□□□□ -0.28
COL4A3-205ENST00000471862 NEK1Q96PY6 1258 aa13.31□□□□□ -0.28
COL4A3-205ENST00000471862 SEMA6BQ9H3T3 888 aa13.31□□□□□ -0.28
COL4A3-205ENST00000471862 SLC12A7Q9Y666 1083 aa13.31□□□□□ -0.28
COL4A3-205ENST00000471862 TET1Q8NFU7 2136 aa13.31□□□□□ -0.28
COL4A3-205ENST00000471862 F2P00734 622 aa13.3□□□□□ -0.28
COL4A3-205ENST00000471862 TGFB3P10600 412 aa13.3□□□□□ -0.28
COL4A3-205ENST00000471862 UBA1P22314 1058 aaKnown RBP13.3□□□□□ -0.28
COL4A3-205ENST00000471862 DNAJB2P25686 324 aa13.3□□□□□ -0.28
COL4A3-205ENST00000471862 ICAM3P32942 547 aa13.3□□□□□ -0.28
COL4A3-205ENST00000471862 SEMA3FQ13275 785 aa13.3□□□□□ -0.28
COL4A3-205ENST00000471862 DGKDQ16760 1214 aa13.3□□□□□ -0.28
COL4A3-205ENST00000471862 HSDL1Q3SXM5 330 aa13.3□□□□□ -0.28
COL4A3-205ENST00000471862 CELF3Q5SZQ8 465 aaKnown RBP13.3□□□□□ -0.28
COL4A3-205ENST00000471862 APOA5Q6Q788 366 aa13.3□□□□□ -0.28
COL4A3-205ENST00000471862 USP17L6PQ6QN14 398 aa13.3□□□□□ -0.28
COL4A3-205ENST00000471862 DHX32Q7L7V1 743 aaKnown RBP13.3□□□□□ -0.28
COL4A3-205ENST00000471862 DHX37Q8IY37 1157 aaKnown RBP13.3□□□□□ -0.28
COL4A3-205ENST00000471862 CMTR1Q8N1G2 835 aaKnown RBP13.3□□□□□ -0.28
COL4A3-205ENST00000471862 FANCBQ8NB91 859 aa13.3□□□□□ -0.28
COL4A3-205ENST00000471862 ZFP91Q96JP5 570 aaPredicted RBP13.3□□□□□ -0.28
COL4A3-205ENST00000471862 CXXC1Q9P0U4 656 aaPredicted RBP13.3□□□□□ -0.28
COL4A3-205ENST00000471862 SEC63Q9UGP8 760 aaKnown RBP13.3□□□□□ -0.28
COL4A3-205ENST00000471862 PITPNM1O00562 1244 aa13.29□□□□□ -0.28
COL4A3-205ENST00000471862 STAM2O75886 525 aa13.29□□□□□ -0.28
COL4A3-205ENST00000471862 GGPS1O95749 300 aa13.29□□□□□ -0.28
COL4A3-205ENST00000471862 FGBP02675 491 aa13.29□□□□□ -0.28
COL4A3-205ENST00000471862 PSEN2P49810 448 aa13.29□□□□□ -0.28
COL4A3-205ENST00000471862 FUT2Q10981 343 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms