RNA–Protein interactions for RNA: ENST00000471357.1

LINC00880-201, long intergenic non-protein coding RNA 880, humanhuman

TSL 1 (best) BASIC

Gene LINC00880, Length 2,018 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00880-201ENST00000471357 RPTORQ8N122 1335 aa13.49□□□□□ -0.25
LINC00880-201ENST00000471357 IGLV3-22A0A075B6J6 115 aa13.49□□□□□ -0.25
LINC00880-201ENST00000471357 STAT6P42226 847 aa13.49□□□□□ -0.25
LINC00880-201ENST00000471357 BAATQ14032 418 aaPredicted RBP13.49□□□□□ -0.25
LINC00880-201ENST00000471357 ZRSR1Q15695 479 aaKnown RBP13.49□□□□□ -0.25
LINC00880-201ENST00000471357 STX1AQ16623 288 aa13.49□□□□□ -0.25
LINC00880-201ENST00000471357 CEP55Q53EZ4 464 aa13.49□□□□□ -0.25
LINC00880-201ENST00000471357 RRAGBQ5VZM2 374 aa13.49□□□□□ -0.25
LINC00880-201ENST00000471357 CST9Q5W186 159 aa13.49□□□□□ -0.25
LINC00880-201ENST00000471357 RNF214Q8ND24 703 aa13.49□□□□□ -0.25
LINC00880-201ENST00000471357 CHST13Q8NET6 341 aa13.49□□□□□ -0.25
LINC00880-201ENST00000471357 CYP2W1Q8TAV3 490 aa13.49□□□□□ -0.25
LINC00880-201ENST00000471357 GJA10Q969M2 543 aa13.49□□□□□ -0.25
LINC00880-201ENST00000471357 TAAR1Q96RJ0 339 aa13.49□□□□□ -0.25
LINC00880-201ENST00000471357 TUBE1Q9UJT0 475 aa13.49□□□□□ -0.25
LINC00880-201ENST00000471357 POTEMA6NI47 508 aa13.48□□□□□ -0.25
LINC00880-201ENST00000471357 MSH4O15457 936 aa13.48□□□□□ -0.25
LINC00880-201ENST00000471357 CETPP11597 493 aa13.48□□□□□ -0.25
LINC00880-201ENST00000471357 XRCC6P12956 609 aaKnown RBP eCLIP13.48□□□□□ -0.25
LINC00880-201ENST00000471357 GTF2A2P52657 109 aa13.48□□□□□ -0.25
LINC00880-201ENST00000471357 ANO6Q4KMQ2 910 aa13.48□□□□□ -0.25
LINC00880-201ENST00000471357 SH3RF1Q7Z6J0 888 aa13.48□□□□□ -0.25
LINC00880-201ENST00000471357 PAGE5Q96GU1 130 aa13.48□□□□□ -0.25
LINC00880-201ENST00000471357 MMTAG2Q9BU76 263 aaKnown RBP13.48□□□□□ -0.25
LINC00880-201ENST00000471357 ANO10Q9NW15 660 aa13.48□□□□□ -0.25
LINC00880-201ENST00000471357 FRMPD4Q14CM0 1322 aa13.47□□□□□ -0.25
LINC00880-201ENST00000471357 PRR29P0C7W0 189 aa13.47□□□□□ -0.25
LINC00880-201ENST00000471357 KRT79Q5XKE5 535 aa13.47□□□□□ -0.25
LINC00880-201ENST00000471357 PDXDC2PQ6P474 469 aa13.47□□□□□ -0.25
LINC00880-201ENST00000471357 PLA2G4DQ86XP0 818 aa13.47□□□□□ -0.25
LINC00880-201ENST00000471357 RIOX2Q8IUF8 465 aa13.47□□□□□ -0.25
LINC00880-201ENST00000471357 GRAMD1CQ8IYS0 662 aa13.47□□□□□ -0.25
LINC00880-201ENST00000471357 CALML4Q96GE6 196 aa13.47□□□□□ -0.25
LINC00880-201ENST00000471357 MS4A4AQ96JQ5 239 aa13.47□□□□□ -0.25
LINC00880-201ENST00000471357 UIMC1Q96RL1 719 aa13.47□□□□□ -0.25
LINC00880-201ENST00000471357 RMDN3Q96TC7 470 aa13.47□□□□□ -0.25
LINC00880-201ENST00000471357 PAGR1Q9BTK6 254 aa13.47□□□□□ -0.25
LINC00880-201ENST00000471357 SPATC1LQ9H0A9 340 aa13.47□□□□□ -0.25
LINC00880-201ENST00000471357 PCDHA5Q9Y5H7 936 aa13.47□□□□□ -0.25
LINC00880-201ENST00000471357 MEIS1O00470 390 aa13.47□□□□□ -0.25
LINC00880-201ENST00000471357 CAVIN2O95810 425 aa13.47□□□□□ -0.25
LINC00880-201ENST00000471357 ZBTB48P10074 688 aaPredicted RBP13.47□□□□□ -0.25
LINC00880-201ENST00000471357 AFMP43652 599 aa13.47□□□□□ -0.25
LINC00880-201ENST00000471357 SETQ01105 290 aaPredicted RBP13.47□□□□□ -0.25
LINC00880-201ENST00000471357 MKRN3Q13064 507 aaKnown RBP13.47□□□□□ -0.25
LINC00880-201ENST00000471357 SPRYD7Q5W111 196 aa13.47□□□□□ -0.25
LINC00880-201ENST00000471357 PCNX4Q63HM2 1172 aa13.47□□□□□ -0.25
LINC00880-201ENST00000471357 SNX29Q8TEQ0 813 aa13.47□□□□□ -0.25
LINC00880-201ENST00000471357 PLIN2Q99541 437 aa13.47□□□□□ -0.25
LINC00880-201ENST00000471357 MXRA8Q9BRK3 442 aa13.47□□□□□ -0.25
LINC00880-201ENST00000471357 DNAJC25Q9H1X3 360 aa13.47□□□□□ -0.25
LINC00880-201ENST00000471357 A1CFQ9NQ94 594 aaKnown RBP13.47□□□□□ -0.25
LINC00880-201ENST00000471357 PXMP2Q9NR77 195 aa13.47□□□□□ -0.25
LINC00880-201ENST00000471357 CYP39A1Q9NYL5 469 aa13.47□□□□□ -0.25
LINC00880-201ENST00000471357 FBXO40Q9UH90 709 aa13.47□□□□□ -0.25
LINC00880-201ENST00000471357 PNMA3Q9UL41 463 aa13.47□□□□□ -0.25
LINC00880-201ENST00000471357 CCL15-CCL14A0A0B4J2E2 113 aa13.46□□□□□ -0.25
LINC00880-201ENST00000471357 BIN1O00499 593 aa13.46□□□□□ -0.25
LINC00880-201ENST00000471357 PEX10O60683 326 aa13.46□□□□□ -0.25
LINC00880-201ENST00000471357 CNMDO75829 334 aa13.46□□□□□ -0.25
LINC00880-201ENST00000471357 PLCG1P19174 1290 aa13.46□□□□□ -0.25
LINC00880-201ENST00000471357 EIF2AK2P19525 551 aaKnown RBP13.46□□□□□ -0.25
LINC00880-201ENST00000471357 NLRP12P59046 1061 aa13.46□□□□□ -0.25
LINC00880-201ENST00000471357 PGM5Q15124 567 aa13.46□□□□□ -0.25
LINC00880-201ENST00000471357 CCL15Q16663 113 aa13.46□□□□□ -0.25
LINC00880-201ENST00000471357 NAALADL2Q58DX5 795 aa13.46□□□□□ -0.25
LINC00880-201ENST00000471357 ARHGEF16Q5VV41 709 aa13.46□□□□□ -0.25
LINC00880-201ENST00000471357 FAM200AQ8TCP9 573 aa13.46□□□□□ -0.25
LINC00880-201ENST00000471357 SMARCE1Q969G3 411 aa13.46□□□□□ -0.25
LINC00880-201ENST00000471357 ZFP91Q96JP5 570 aaPredicted RBP13.46□□□□□ -0.25
LINC00880-201ENST00000471357 PDCD2LQ9BRP1 358 aa13.46□□□□□ -0.25
LINC00880-201ENST00000471357 CUEDC2Q9H467 287 aa13.46□□□□□ -0.25
LINC00880-201ENST00000471357 RBPJLQ9UBG7 517 aa13.46□□□□□ -0.25
LINC00880-201ENST00000471357 RBBP6Q7Z6E9 1792 aaKnown RBP13.46□□□□□ -0.25
LINC00880-201ENST00000471357 A0A0G2JMZ2 1700 aa13.46□□□□□ -0.25
LINC00880-201ENST00000471357 A0A087WWV3 80 aa13.46□□□□□ -0.26
LINC00880-201ENST00000471357 SMC2O95347 1197 aa13.46□□□□□ -0.26
LINC00880-201ENST00000471357 SARSP49591 514 aaKnown RBP13.46□□□□□ -0.26
LINC00880-201ENST00000471357 HUNKP57058 714 aa13.46□□□□□ -0.26
LINC00880-201ENST00000471357 NT5DC1Q5TFE4 455 aa13.46□□□□□ -0.26
LINC00880-201ENST00000471357 NIPA1Q7RTP0 329 aa13.46□□□□□ -0.26
LINC00880-201ENST00000471357 IL31RAQ8NI17 732 aa13.46□□□□□ -0.26
LINC00880-201ENST00000471357 CDK5RAP3Q96JB5 506 aa13.46□□□□□ -0.26
LINC00880-201ENST00000471357 PURBQ96QR8 312 aaKnown RBP13.46□□□□□ -0.26
LINC00880-201ENST00000471357 SLC45A1Q9Y2W3 748 aa13.46□□□□□ -0.26
LINC00880-201ENST00000471357 SLC25A27O95847 323 aa13.45□□□□□ -0.26
LINC00880-201ENST00000471357 BCRP11274 1271 aa13.45□□□□□ -0.26
LINC00880-201ENST00000471357 ITGB5P18084 799 aa13.45□□□□□ -0.26
LINC00880-201ENST00000471357 ZNF165P49910 485 aa13.45□□□□□ -0.26
LINC00880-201ENST00000471357 MRPS9P82933 396 aaKnown RBP13.45□□□□□ -0.26
LINC00880-201ENST00000471357 SPIRE1Q08AE8 756 aa13.45□□□□□ -0.26
LINC00880-201ENST00000471357 GRB10Q13322 594 aa13.45□□□□□ -0.26
LINC00880-201ENST00000471357 UVSSAQ2YD98 709 aa13.45□□□□□ -0.26
LINC00880-201ENST00000471357 XRRA1Q6P2D8 792 aa13.45□□□□□ -0.26
LINC00880-201ENST00000471357 NCAPG2Q86XI2 1143 aa13.45□□□□□ -0.26
LINC00880-201ENST00000471357 ANKRD35Q8N283 1001 aa13.45□□□□□ -0.26
LINC00880-201ENST00000471357 SPATA20Q8TB22 786 aa13.45□□□□□ -0.26
LINC00880-201ENST00000471357 NSUN6Q8TEA1 469 aaKnown RBP13.45□□□□□ -0.26
LINC00880-201ENST00000471357 GTF3C2Q8WUA4 911 aaPredicted RBP13.45□□□□□ -0.26
LINC00880-201ENST00000471357 BRI3BPQ8WY22 251 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms