RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 CAP1Q01518 475 aa2.38□□□□□ -2.03
UBXN4-207ENST00000471246 FHL2Q14192 279 aa2.38□□□□□ -2.03
UBXN4-207ENST00000471246 MBLAC2Q68D91 279 aa2.38□□□□□ -2.03
UBXN4-207ENST00000471246 WWC2Q6AWC2 1192 aa2.38□□□□□ -2.03
UBXN4-207ENST00000471246 GTF2IRD2BQ6EKJ0 949 aa2.38□□□□□ -2.03
UBXN4-207ENST00000471246 MRM1Q6IN84 353 aaKnown RBP2.38□□□□□ -2.03
UBXN4-207ENST00000471246 KRTAP5-4Q6L8H1 288 aa2.38□□□□□ -2.03
UBXN4-207ENST00000471246 POMZP3Q6PJE2 187 aa2.38□□□□□ -2.03
UBXN4-207ENST00000471246 GTF2IRD2Q86UP8 949 aa2.38□□□□□ -2.03
UBXN4-207ENST00000471246 CABP7Q86V35 215 aa2.38□□□□□ -2.03
UBXN4-207ENST00000471246 GLCCI1Q86VQ1 547 aa2.38□□□□□ -2.03
UBXN4-207ENST00000471246 ZNF227Q86WZ6 799 aa2.38□□□□□ -2.03
UBXN4-207ENST00000471246 VPS37DQ86XT2 251 aa2.38□□□□□ -2.03
UBXN4-207ENST00000471246 CPNE8Q86YQ8 564 aa2.38□□□□□ -2.03
UBXN4-207ENST00000471246 MCF2L2Q86YR7 1114 aa2.38□□□□□ -2.03
UBXN4-207ENST00000471246 SCUBE1Q8IWY4 988 aa2.38□□□□□ -2.03
UBXN4-207ENST00000471246 FAM178BQ8IXR5 827 aa2.38□□□□□ -2.03
UBXN4-207ENST00000471246 LZTR1Q8N653 840 aa2.38□□□□□ -2.03
UBXN4-207ENST00000471246 BVESQ8NE79 360 aa2.38□□□□□ -2.03
UBXN4-207ENST00000471246 BTN2A2Q8WVV5 523 aa2.38□□□□□ -2.03
UBXN4-207ENST00000471246 COPS5Q92905 334 aa2.38□□□□□ -2.03
UBXN4-207ENST00000471246 VOPP1Q96AW1 172 aa2.38□□□□□ -2.03
UBXN4-207ENST00000471246 CHFRQ96EP1 664 aa2.38□□□□□ -2.03
UBXN4-207ENST00000471246 MRGPRX3Q96LB0 322 aa2.38□□□□□ -2.03
UBXN4-207ENST00000471246 APBA2Q99767 749 aa2.38□□□□□ -2.03
UBXN4-207ENST00000471246 SPATA25Q9BR10 227 aa2.38□□□□□ -2.03
UBXN4-207ENST00000471246 NKX2-4Q9H2Z4 354 aa2.38□□□□□ -2.03
UBXN4-207ENST00000471246 ZNF408Q9H9D4 720 aa2.38□□□□□ -2.03
UBXN4-207ENST00000471246 RXFP1Q9HBX9 757 aa2.38□□□□□ -2.03
UBXN4-207ENST00000471246 CLEC1BQ9P126 229 aa2.38□□□□□ -2.03
UBXN4-207ENST00000471246 GULP1Q9UBP9 304 aa2.38□□□□□ -2.03
UBXN4-207ENST00000471246 DBR1Q9UK59 544 aaKnown RBP2.38□□□□□ -2.03
UBXN4-207ENST00000471246 C7orf72A4D263 438 aa2.37□□□□□ -2.03
UBXN4-207ENST00000471246 F8W031 263 aaPredicted RBP2.37□□□□□ -2.03
UBXN4-207ENST00000471246 NOP56O00567 594 aaKnown RBP2.37□□□□□ -2.03
UBXN4-207ENST00000471246 NPHS1O60500 1241 aa2.37□□□□□ -2.03
UBXN4-207ENST00000471246 DDAH1O94760 285 aa2.37□□□□□ -2.03
UBXN4-207ENST00000471246 PLS3P13797 630 aa2.37□□□□□ -2.03
UBXN4-207ENST00000471246 PFKLP17858 780 aa2.37□□□□□ -2.03
UBXN4-207ENST00000471246 IGFBP6P24592 240 aaPredicted RBP2.37□□□□□ -2.03
UBXN4-207ENST00000471246 ETFBP38117 255 aa2.37□□□□□ -2.03
UBXN4-207ENST00000471246 MC3RP41968 323 aa2.37□□□□□ -2.03
UBXN4-207ENST00000471246 PRR5P85299 388 aa2.37□□□□□ -2.03
UBXN4-207ENST00000471246 PURAQ00577 322 aaKnown RBP2.37□□□□□ -2.03
UBXN4-207ENST00000471246 ARID5AQ03989 594 aa2.37□□□□□ -2.03
UBXN4-207ENST00000471246 CYP4F3Q08477 520 aa2.37□□□□□ -2.03
UBXN4-207ENST00000471246 SV2CQ496J9 727 aa2.37□□□□□ -2.03
UBXN4-207ENST00000471246 NETO2Q8NC67 525 aa2.37□□□□□ -2.03
UBXN4-207ENST00000471246 NLGN2Q8NFZ4 835 aa2.37□□□□□ -2.03
UBXN4-207ENST00000471246 NPLOC4Q8TAT6 608 aa2.37□□□□□ -2.03
UBXN4-207ENST00000471246 MICAL1Q8TDZ2 1067 aa2.37□□□□□ -2.03
UBXN4-207ENST00000471246 HNRNPLLQ8WVV9 542 aaKnown RBP2.37□□□□□ -2.03
UBXN4-207ENST00000471246 ALG3Q92685 438 aa2.37□□□□□ -2.03
UBXN4-207ENST00000471246 TSPAN17Q96FV3 270 aa2.37□□□□□ -2.03
UBXN4-207ENST00000471246 MTA3Q9BTC8 594 aa2.37□□□□□ -2.03
UBXN4-207ENST00000471246 GPRC5CQ9NQ84 441 aa2.37□□□□□ -2.03
UBXN4-207ENST00000471246 ST6GALNAC2Q9UJ37 374 aa2.37□□□□□ -2.03
UBXN4-207ENST00000471246 TSC22D4Q9Y3Q8 395 aa2.37□□□□□ -2.03
UBXN4-207ENST00000471246 IRS2Q9Y4H2 1338 aa2.37□□□□□ -2.03
UBXN4-207ENST00000471246 PPP1R11O60927 126 aaPredicted RBP2.36□□□□□ -2.03
UBXN4-207ENST00000471246 GJB6O95452 261 aa2.36□□□□□ -2.03
UBXN4-207ENST00000471246 PLA2G1BP04054 148 aaKnown RBP2.36□□□□□ -2.03
UBXN4-207ENST00000471246 FUCA1P04066 466 aa2.36□□□□□ -2.03
UBXN4-207ENST00000471246 ITGAVP06756 1048 aa2.36□□□□□ -2.03
UBXN4-207ENST00000471246 ASGR2P07307 311 aa2.36□□□□□ -2.03
UBXN4-207ENST00000471246 SNRPB2P08579 225 aaKnown RBP2.36□□□□□ -2.03
UBXN4-207ENST00000471246 PMLP29590 882 aa2.36□□□□□ -2.03
UBXN4-207ENST00000471246 RBM10P98175 930 aaKnown RBP2.36□□□□□ -2.03
UBXN4-207ENST00000471246 TARBP2Q15633 366 aaKnown RBP2.36□□□□□ -2.03
UBXN4-207ENST00000471246 FXNQ16595 210 aa2.36□□□□□ -2.03
UBXN4-207ENST00000471246 INF2Q27J81 1249 aa2.36□□□□□ -2.03
UBXN4-207ENST00000471246 SLC10A6Q3KNW5 377 aa2.36□□□□□ -2.03
UBXN4-207ENST00000471246 VWA3BQ502W6 1294 aa2.36□□□□□ -2.03
UBXN4-207ENST00000471246 LIPIQ6XZB0 460 aa2.36□□□□□ -2.03
UBXN4-207ENST00000471246 DCP2Q8IU60 420 aaKnown RBP2.36□□□□□ -2.03
UBXN4-207ENST00000471246 TEX2Q8IWB9 1127 aa2.36□□□□□ -2.03
UBXN4-207ENST00000471246 CHST13Q8NET6 341 aa2.36□□□□□ -2.03
UBXN4-207ENST00000471246 USP33Q8TEY7 942 aa2.36□□□□□ -2.03
UBXN4-207ENST00000471246 FRS2Q8WU20 508 aa2.36□□□□□ -2.03
UBXN4-207ENST00000471246 MMP19Q99542 508 aa2.36□□□□□ -2.03
UBXN4-207ENST00000471246 KRTAP4-4Q9BYR3 166 aa2.36□□□□□ -2.03
UBXN4-207ENST00000471246 LNPKQ9C0E8 428 aa2.36□□□□□ -2.03
UBXN4-207ENST00000471246 RNF38Q9H0F5 515 aa2.36□□□□□ -2.03
UBXN4-207ENST00000471246 BCAS3Q9H6U6 928 aa2.36□□□□□ -2.03
UBXN4-207ENST00000471246 CYP26B1Q9NR63 512 aa2.36□□□□□ -2.03
UBXN4-207ENST00000471246 IGSF5Q9NSI5 407 aa2.36□□□□□ -2.03
UBXN4-207ENST00000471246 BTG4Q9NY30 223 aa2.36□□□□□ -2.03
UBXN4-207ENST00000471246 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP2.36□□□□□ -2.03
UBXN4-207ENST00000471246 MARCH2Q9P0N8 246 aa2.36□□□□□ -2.03
UBXN4-207ENST00000471246 LRP2BPQ9P2M1 347 aa2.36□□□□□ -2.03
UBXN4-207ENST00000471246 NUDT5Q9UKK9 219 aa2.36□□□□□ -2.03
UBXN4-207ENST00000471246 FAN1Q9Y2M0 1017 aa2.36□□□□□ -2.03
UBXN4-207ENST00000471246 SIT1Q9Y3P8 196 aa2.36□□□□□ -2.03
UBXN4-207ENST00000471246 MEFVO15553 781 aaPredicted RBP2.35□□□□□ -2.03
UBXN4-207ENST00000471246 NOBOXO60393 691 aa2.35□□□□□ -2.03
UBXN4-207ENST00000471246 NTRK1P04629 796 aa2.35□□□□□ -2.03
UBXN4-207ENST00000471246 SCG5P05408 212 aa2.35□□□□□ -2.03
UBXN4-207ENST00000471246 ATF2P15336 505 aa2.35□□□□□ -2.03
UBXN4-207ENST00000471246 FPR2P25090 351 aa2.35□□□□□ -2.03
UBXN4-207ENST00000471246 ECI1P42126 302 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms