RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 CTDSPL2Q05D32 466 aa7.46□□□□□ -1.22
BRCA1-210ENST00000471181 KIAA1841Q6NSI8 718 aa7.46□□□□□ -1.22
BRCA1-210ENST00000471181 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.46□□□□□ -1.22
BRCA1-210ENST00000471181 PIK3R5Q8WYR1 880 aa7.46□□□□□ -1.22
BRCA1-210ENST00000471181 SMCO2A6NFE2 343 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 F8W8V4 182 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 PRDM1O75626 825 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 TMCC1O94876 653 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 KRT1P04264 644 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 DRP2Q13474 957 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 MESDQ14696 234 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 FSCBQ5H9T9 825 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 RGS9BPQ6ZS82 235 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 ZC3H18Q86VM9 953 aaKnown RBP7.45□□□□□ -1.22
BRCA1-210ENST00000471181 SRRM1Q8IYB3 904 aaKnown RBP7.45□□□□□ -1.22
BRCA1-210ENST00000471181 TRIM58Q8NG06 486 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 PSDA5PKW4 1024 aaPredicted RBP7.45□□□□□ -1.22
BRCA1-210ENST00000471181 CUTAO60888 179 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 MYCP01106 439 aaPredicted RBP7.45□□□□□ -1.22
BRCA1-210ENST00000471181 POLR2FP61218 127 aaKnown RBP7.45□□□□□ -1.22
BRCA1-210ENST00000471181 GUCY2DQ02846 1103 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 PNOCQ13519 176 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 CCDC142Q17RM4 750 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 CHMP1BQ7LBR1 199 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 FAM149B1Q96BN6 582 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 MYL10Q9BUA6 226 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 GLT8D2Q9H1C3 349 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 SMYD3Q9H7B4 428 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 CBX8Q9HC52 389 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 CASS4Q9NQ75 786 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 CLCA2Q9UQC9 943 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 hCG_1642624A0A1W2PR95 340 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 GRM8O00222 908 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 TADA3O75528 432 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 ANXA13P27216 316 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 HDAC4P56524 1084 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 NCAPG2Q86XI2 1143 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 TRIML1Q8N9V2 468 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 CCDC127Q96BQ5 260 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 DESI2Q9BSY9 194 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 AATFQ9NY61 560 aaKnown RBP eCLIP7.45□□□□□ -1.22
BRCA1-210ENST00000471181 POLIQ9UNA4 740 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 CCDC61Q9Y6R9 512 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 LRRIQ4A6NIV6 560 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 KCNJ18B7U540 433 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 BRD1O95696 1058 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 HSPA4LO95757 839 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 SERPINB2P05120 415 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 CPA1P15085 419 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 FOSL2P15408 326 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 TSPY1Q01534 308 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 KRT17Q04695 432 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 KCNJ12Q14500 433 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 OTUD7BQ6GQQ9 843 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 SH3BP5LQ7L8J4 393 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 ADCK1Q86TW2 530 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 MLKLQ8NB16 471 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 MEIS3Q99687 375 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 NFE2L3Q9Y4A8 694 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 LRPPRCP42704 1394 aaKnown RBP7.45□□□□□ -1.22
BRCA1-210ENST00000471181 CFAP69A5D8W1 941 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 GOLGA8SH3BPF8 625 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 IGHDP01880 384 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 ESRRAP11474 423 aaPredicted RBP7.45□□□□□ -1.22
BRCA1-210ENST00000471181 GRK2P25098 689 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 POLGP54098 1239 aaPredicted RBP7.45□□□□□ -1.22
BRCA1-210ENST00000471181 TRIP13Q15645 432 aaPredicted RBP7.45□□□□□ -1.22
BRCA1-210ENST00000471181 RBBP7Q16576 425 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 GNPTABQ3T906 1256 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 PPP6R3Q5H9R7 873 aaPredicted RBP7.45□□□□□ -1.22
BRCA1-210ENST00000471181 CDC37L1Q7L3B6 337 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 JPH2Q9BR39 696 aaPredicted RBP7.45□□□□□ -1.22
BRCA1-210ENST00000471181 PANK4Q9NVE7 773 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 TPCN1Q9ULQ1 816 aa7.45□□□□□ -1.22
BRCA1-210ENST00000471181 THRAP3Q9Y2W1 955 aaKnown RBP7.45□□□□□ -1.22
BRCA1-210ENST00000471181 MAP3K1Q13233 1512 aa7.44□□□□□ -1.22
BRCA1-210ENST00000471181 MCF2LO15068 1137 aa7.44□□□□□ -1.22
BRCA1-210ENST00000471181 APOA1P02647 267 aa7.44□□□□□ -1.22
BRCA1-210ENST00000471181 TAC1P20366 129 aa7.44□□□□□ -1.22
BRCA1-210ENST00000471181 SLCO1A2P46721 670 aa7.44□□□□□ -1.22
BRCA1-210ENST00000471181 CEP55Q53EZ4 464 aa7.44□□□□□ -1.22
BRCA1-210ENST00000471181 RNF219Q5W0B1 726 aaPredicted RBP7.44□□□□□ -1.22
BRCA1-210ENST00000471181 RRM2BQ7LG56 351 aa7.44□□□□□ -1.22
BRCA1-210ENST00000471181 IFNLR1Q8IU57 520 aaPredicted RBP7.44□□□□□ -1.22
BRCA1-210ENST00000471181 SULF1Q8IWU6 871 aa7.44□□□□□ -1.22
BRCA1-210ENST00000471181 LARGE2Q8N3Y3 721 aa7.44□□□□□ -1.22
BRCA1-210ENST00000471181 KCTD6Q8NC69 237 aa7.44□□□□□ -1.22
BRCA1-210ENST00000471181 MTBPQ96DY7 904 aa7.44□□□□□ -1.22
BRCA1-210ENST00000471181 ATP6V0A4Q9HBG4 840 aa7.44□□□□□ -1.22
BRCA1-210ENST00000471181 NCOA5Q9HCD5 579 aaKnown RBP7.44□□□□□ -1.22
BRCA1-210ENST00000471181 PAPOLBQ9NRJ5 636 aaKnown RBP7.44□□□□□ -1.22
BRCA1-210ENST00000471181 IMPACTQ9P2X3 320 aa7.44□□□□□ -1.22
BRCA1-210ENST00000471181 AKT3Q9Y243 479 aa7.44□□□□□ -1.22
BRCA1-210ENST00000471181 NPHP3Q7Z494 1330 aa7.44□□□□□ -1.22
BRCA1-210ENST00000471181 RASSF10A6NK89 507 aa7.44□□□□□ -1.22
BRCA1-210ENST00000471181 RASGRF2O14827 1237 aa7.44□□□□□ -1.22
BRCA1-210ENST00000471181 N4BP1O75113 896 aaKnown RBP7.44□□□□□ -1.22
BRCA1-210ENST00000471181 SUPT3HO75486 399 aa7.44□□□□□ -1.22
BRCA1-210ENST00000471181 DMP1Q13316 513 aaPredicted RBP7.44□□□□□ -1.22
BRCA1-210ENST00000471181 DMC1Q14565 340 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms