RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 STAG1Q8WVM7 1258 aa10.49□□□□□ -0.73
XRN1-208ENST00000470537 GPATCH3Q96I76 525 aa10.49□□□□□ -0.73
XRN1-208ENST00000470537 TRERF1Q96PN7 1200 aa10.49□□□□□ -0.73
XRN1-208ENST00000470537 KATNBL1Q9H079 304 aa10.49□□□□□ -0.73
XRN1-208ENST00000470537 PUS7LQ9H0K6 701 aaKnown RBP10.49□□□□□ -0.73
XRN1-208ENST00000470537 ALDH8A1Q9H2A2 487 aaPredicted RBP10.49□□□□□ -0.73
XRN1-208ENST00000470537 RNF146Q9NTX7 359 aa10.49□□□□□ -0.73
XRN1-208ENST00000470537 RAPGEFL1Q9UHV5 662 aa10.49□□□□□ -0.73
XRN1-208ENST00000470537 MTCH2Q9Y6C9 303 aa10.49□□□□□ -0.73
XRN1-208ENST00000470537 TMEM232C9JQI7 657 aa10.48□□□□□ -0.73
XRN1-208ENST00000470537 PARNO95453 639 aaKnown RBP10.48□□□□□ -0.73
XRN1-208ENST00000470537 RLBP1P12271 317 aa10.48□□□□□ -0.73
XRN1-208ENST00000470537 TFF2Q03403 129 aa10.48□□□□□ -0.73
XRN1-208ENST00000470537 BFSP2Q13515 415 aa10.48□□□□□ -0.73
XRN1-208ENST00000470537 SMYD5Q6GMV2 418 aa10.48□□□□□ -0.73
XRN1-208ENST00000470537 CEP95Q96GE4 821 aa10.48□□□□□ -0.73
XRN1-208ENST00000470537 GMCL1Q96IK5 515 aa10.48□□□□□ -0.73
XRN1-208ENST00000470537 A1CFQ9NQ94 594 aaKnown RBP10.48□□□□□ -0.73
XRN1-208ENST00000470537 LMCD1Q9NZU5 365 aa10.48□□□□□ -0.73
XRN1-208ENST00000470537 DDX19BQ9UMR2 479 aa10.48□□□□□ -0.73
XRN1-208ENST00000470537 IGKV6D-41A0A0C4DH26 115 aa10.47□□□□□ -0.73
XRN1-208ENST00000470537 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.47□□□□□ -0.73
XRN1-208ENST00000470537 GSG1L2A8MUP6 293 aa10.47□□□□□ -0.73
XRN1-208ENST00000470537 PATL2C9JE40 543 aaKnown RBP10.47□□□□□ -0.73
XRN1-208ENST00000470537 NKRFO15226 690 aaKnown RBP eCLIP10.47□□□□□ -0.73
XRN1-208ENST00000470537 GPR37L1O60883 481 aa10.47□□□□□ -0.73
XRN1-208ENST00000470537 BAIAP3O94812 1187 aa10.47□□□□□ -0.73
XRN1-208ENST00000470537 CD2BP2O95400 341 aaKnown RBP10.47□□□□□ -0.73
XRN1-208ENST00000470537 CA3P07451 260 aa10.47□□□□□ -0.73
XRN1-208ENST00000470537 ALAS1P13196 640 aa10.47□□□□□ -0.73
XRN1-208ENST00000470537 SMPD1P17405 629 aa10.47□□□□□ -0.73
XRN1-208ENST00000470537 PTPN11Q06124 597 aaPredicted RBP10.47□□□□□ -0.73
XRN1-208ENST00000470537 DUSP28Q4G0W2 176 aa10.47□□□□□ -0.73
XRN1-208ENST00000470537 NFRKBQ6P4R8 1299 aa10.47□□□□□ -0.73
XRN1-208ENST00000470537 CCDC155Q8N6L0 562 aa10.47□□□□□ -0.73
XRN1-208ENST00000470537 NEDD1Q8NHV4 660 aa10.47□□□□□ -0.73
XRN1-208ENST00000470537 NLRP7Q8WX94 980 aa10.47□□□□□ -0.73
XRN1-208ENST00000470537 APPBP2Q92624 585 aa10.47□□□□□ -0.73
XRN1-208ENST00000470537 THAP11Q96EK4 314 aa10.47□□□□□ -0.73
XRN1-208ENST00000470537 FGD4Q96M96 766 aa10.47□□□□□ -0.73
XRN1-208ENST00000470537 AGBL1Q96MI9 1066 aa10.47□□□□□ -0.73
XRN1-208ENST00000470537 MTG1Q9BT17 334 aaPredicted RBP10.47□□□□□ -0.73
XRN1-208ENST00000470537 LRFN3Q9BTN0 628 aa10.47□□□□□ -0.73
XRN1-208ENST00000470537 LRRCC1Q9C099 1032 aa10.47□□□□□ -0.73
XRN1-208ENST00000470537 FTOQ9C0B1 505 aaKnown RBP eCLIP10.47□□□□□ -0.73
XRN1-208ENST00000470537 WNT8AQ9H1J5 351 aa10.47□□□□□ -0.73
XRN1-208ENST00000470537 NOD1Q9Y239 953 aa10.47□□□□□ -0.73
XRN1-208ENST00000470537 GRIN2DO15399 1336 aa10.47□□□□□ -0.73
XRN1-208ENST00000470537 TNKSO95271 1327 aa10.47□□□□□ -0.73
XRN1-208ENST00000470537 TCF20Q9UGU0 1960 aaKnown RBP10.46□□□□□ -0.73
XRN1-208ENST00000470537 SMIM22K7EJ46 135 aa10.46□□□□□ -0.73
XRN1-208ENST00000470537 MYOGP15173 224 aa10.46□□□□□ -0.73
XRN1-208ENST00000470537 KCNJ6P48051 423 aa10.46□□□□□ -0.73
XRN1-208ENST00000470537 KCNQ1P51787 676 aa10.46□□□□□ -0.73
XRN1-208ENST00000470537 SLFNL1Q499Z3 407 aa10.46□□□□□ -0.73
XRN1-208ENST00000470537 RCSD1Q6JBY9 416 aa10.46□□□□□ -0.73
XRN1-208ENST00000470537 TAPT1Q6NXT6 567 aa10.46□□□□□ -0.73
XRN1-208ENST00000470537 EEPD1Q7L9B9 569 aa10.46□□□□□ -0.73
XRN1-208ENST00000470537 DEFB128Q7Z7B8 93 aa10.46□□□□□ -0.73
XRN1-208ENST00000470537 STK11IPQ8N1F8 1099 aa10.46□□□□□ -0.73
XRN1-208ENST00000470537 KBTBD3Q8NAB2 608 aa10.46□□□□□ -0.73
XRN1-208ENST00000470537 ARNTL2Q8WYA1 636 aa10.46□□□□□ -0.73
XRN1-208ENST00000470537 SCLYQ96I15 445 aa10.46□□□□□ -0.73
XRN1-208ENST00000470537 NECAB3Q96P71 396 aaPredicted RBP10.46□□□□□ -0.73
XRN1-208ENST00000470537 WDR11Q9BZH6 1224 aa10.46□□□□□ -0.73
XRN1-208ENST00000470537 ECHDC1Q9NTX5 307 aa10.46□□□□□ -0.73
XRN1-208ENST00000470537 CYP39A1Q9NYL5 469 aa10.46□□□□□ -0.73
XRN1-208ENST00000470537 SLC27A5Q9Y2P5 690 aa10.46□□□□□ -0.73
XRN1-208ENST00000470537 ASTN1O14525 1302 aa10.46□□□□□ -0.73
XRN1-208ENST00000470537 UMODL1Q5DID0 1318 aa10.46□□□□□ -0.73
XRN1-208ENST00000470537 MCM3APO60318 1980 aa10.46□□□□□ -0.74
XRN1-208ENST00000470537 REV3LO60673 3130 aa10.46□□□□□ -0.74
XRN1-208ENST00000470537 IQCF3P0C7M6 154 aa10.45□□□□□ -0.74
XRN1-208ENST00000470537 MCCP23508 829 aa10.45□□□□□ -0.74
XRN1-208ENST00000470537 PSMC6P62333 389 aa10.45□□□□□ -0.74
XRN1-208ENST00000470537 TFAP4Q01664 338 aa10.45□□□□□ -0.74
XRN1-208ENST00000470537 TTLL4Q14679 1199 aa10.45□□□□□ -0.74
XRN1-208ENST00000470537 FAM47CQ5HY64 1035 aa10.45□□□□□ -0.74
XRN1-208ENST00000470537 NSMFQ6X4W1 530 aa10.45□□□□□ -0.74
XRN1-208ENST00000470537 HERC6Q8IVU3 1022 aa10.45□□□□□ -0.74
XRN1-208ENST00000470537 CYP4X1Q8N118 509 aa10.45□□□□□ -0.74
XRN1-208ENST00000470537 LRRC47Q8N1G4 583 aaKnown RBP10.45□□□□□ -0.74
XRN1-208ENST00000470537 PANK1Q8TE04 598 aa10.45□□□□□ -0.74
XRN1-208ENST00000470537 MORC4Q8TE76 937 aa10.45□□□□□ -0.74
XRN1-208ENST00000470537 EPHX3Q9H6B9 360 aa10.45□□□□□ -0.74
XRN1-208ENST00000470537 CCPG1Q9ULG6 757 aa10.45□□□□□ -0.74
XRN1-208ENST00000470537 STX8Q9UNK0 236 aa10.45□□□□□ -0.74
XRN1-208ENST00000470537 PRRC2BQ5JSZ5 2229 aaKnown RBP10.44□□□□□ -0.74
XRN1-208ENST00000470537 RNF113AO15541 343 aaKnown RBP10.44□□□□□ -0.74
XRN1-208ENST00000470537 GPAA1O43292 621 aa10.44□□□□□ -0.74
XRN1-208ENST00000470537 EFCAB14O75071 495 aa10.44□□□□□ -0.74
XRN1-208ENST00000470537 PRDM1O75626 825 aa10.44□□□□□ -0.74
XRN1-208ENST00000470537 ICAM1P05362 532 aa10.44□□□□□ -0.74
XRN1-208ENST00000470537 MYL3P08590 195 aa10.44□□□□□ -0.74
XRN1-208ENST00000470537 CYP2C9P11712 490 aa10.44□□□□□ -0.74
XRN1-208ENST00000470537 ALADP13716 330 aa10.44□□□□□ -0.74
XRN1-208ENST00000470537 PURAQ00577 322 aaKnown RBP10.44□□□□□ -0.74
XRN1-208ENST00000470537 TAP1Q03518 808 aa10.44□□□□□ -0.74
XRN1-208ENST00000470537 FBXO16Q8IX29 292 aaPredicted RBP10.44□□□□□ -0.74
XRN1-208ENST00000470537 IFNL3Q8IZI9 196 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms