RNA–Protein interactions for RNA: ENST00000470280.1

LDHB-205, Transcript of lactate dehydrogenase B, humanhuman

TSL 2

Gene LDHB, Length 710 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-205ENST00000470280 LY6KQ17RY6 165 aa12.13□□□□□ -0.47
LDHB-205ENST00000470280 TYW1BQ6NUM6 668 aa12.13□□□□□ -0.47
LDHB-205ENST00000470280 SAMD3Q8N6K7 520 aa12.13□□□□□ -0.47
LDHB-205ENST00000470280 OR6J1Q8NGC5 347 aa12.13□□□□□ -0.47
LDHB-205ENST00000470280 GPKOWQ92917 476 aaPredicted RBP eCLIP12.13□□□□□ -0.47
LDHB-205ENST00000470280 GLT1D1Q96MS3 346 aa12.13□□□□□ -0.47
LDHB-205ENST00000470280 MPHOSPH6Q99547 160 aaKnown RBP12.13□□□□□ -0.47
LDHB-205ENST00000470280 ZSWIM6Q9HCJ5 1215 aa12.13□□□□□ -0.47
LDHB-205ENST00000470280 RBM28Q9NW13 759 aaKnown RBP12.13□□□□□ -0.47
LDHB-205ENST00000470280 SEC63Q9UGP8 760 aaKnown RBP12.13□□□□□ -0.47
LDHB-205ENST00000470280 NAP1L2Q9ULW6 460 aaPredicted RBP12.13□□□□□ -0.47
LDHB-205ENST00000470280 ELP1O95163 1332 aa12.12□□□□□ -0.47
LDHB-205ENST00000470280 RANBP2P49792 3224 aaKnown RBP12.12□□□□□ -0.47
LDHB-205ENST00000470280 B4DLN1 442 aa12.12□□□□□ -0.47
LDHB-205ENST00000470280 EIF3JO75822 258 aaKnown RBP12.12□□□□□ -0.47
LDHB-205ENST00000470280 PSMA5P28066 241 aa12.12□□□□□ -0.47
LDHB-205ENST00000470280 MRPL12P52815 198 aaKnown RBP12.12□□□□□ -0.47
LDHB-205ENST00000470280 PSMC6P62333 389 aa12.12□□□□□ -0.47
LDHB-205ENST00000470280 FGD1P98174 961 aa12.12□□□□□ -0.47
LDHB-205ENST00000470280 ARHGAP1Q07960 439 aa12.12□□□□□ -0.47
LDHB-205ENST00000470280 FAAP100Q0VG06 881 aa12.12□□□□□ -0.47
LDHB-205ENST00000470280 TOB2Q14106 344 aaPredicted RBP12.12□□□□□ -0.47
LDHB-205ENST00000470280 TTLL4Q14679 1199 aa12.12□□□□□ -0.47
LDHB-205ENST00000470280 UBE2SQ16763 222 aa12.12□□□□□ -0.47
LDHB-205ENST00000470280 WWC2Q6AWC2 1192 aa12.12□□□□□ -0.47
LDHB-205ENST00000470280 ANKRD33Q7Z3H0 272 aa12.12□□□□□ -0.47
LDHB-205ENST00000470280 VSIG10LQ86VR7 867 aa12.12□□□□□ -0.47
LDHB-205ENST00000470280 FBXL16Q8N461 479 aa12.12□□□□□ -0.47
LDHB-205ENST00000470280 SLC43A3Q8NBI5 491 aa12.12□□□□□ -0.47
LDHB-205ENST00000470280 VTI1AQ96AJ9 217 aa12.12□□□□□ -0.47
LDHB-205ENST00000470280 LARP6Q9BRS8 491 aaKnown RBP12.12□□□□□ -0.47
LDHB-205ENST00000470280 UPF3BQ9BZI7 483 aaKnown RBP12.12□□□□□ -0.47
LDHB-205ENST00000470280 PRDM5Q9NQX1 630 aaPredicted RBP12.12□□□□□ -0.47
LDHB-205ENST00000470280 FRMPD4Q14CM0 1322 aa12.11□□□□□ -0.47
LDHB-205ENST00000470280 A0A0U1RQG5 324 aaPredicted RBP12.11□□□□□ -0.47
LDHB-205ENST00000470280 ARVCFO00192 962 aa12.11□□□□□ -0.47
LDHB-205ENST00000470280 NKRFO15226 690 aaKnown RBP eCLIP12.11□□□□□ -0.47
LDHB-205ENST00000470280 PPFIA3O75145 1194 aa12.11□□□□□ -0.47
LDHB-205ENST00000470280 SEC24BO95487 1268 aa12.11□□□□□ -0.47
LDHB-205ENST00000470280 CLTBP09497 229 aa12.11□□□□□ -0.47
LDHB-205ENST00000470280 BMP8BP34820 402 aa12.11□□□□□ -0.47
LDHB-205ENST00000470280 METAP2P50579 478 aaKnown RBP eCLIP12.11□□□□□ -0.47
LDHB-205ENST00000470280 FXR1P51114 621 aaKnown RBP eCLIP12.11□□□□□ -0.47
LDHB-205ENST00000470280 RCAN1P53805 252 aa12.11□□□□□ -0.47
LDHB-205ENST00000470280 MRPS9P82933 396 aaKnown RBP12.11□□□□□ -0.47
LDHB-205ENST00000470280 PURAQ00577 322 aaKnown RBP12.11□□□□□ -0.47
LDHB-205ENST00000470280 RUFY3Q7L099 469 aa12.11□□□□□ -0.47
LDHB-205ENST00000470280 HEATR3Q7Z4Q2 680 aa12.11□□□□□ -0.47
LDHB-205ENST00000470280 PPP1R13LQ8WUF5 828 aa12.11□□□□□ -0.47
LDHB-205ENST00000470280 BCAS3Q9H6U6 928 aa12.11□□□□□ -0.47
LDHB-205ENST00000470280 DDX41Q9UJV9 622 aaKnown RBP12.11□□□□□ -0.47
LDHB-205ENST00000470280 V9GY48 417 aaPredicted RBP12.11□□□□□ -0.47
LDHB-205ENST00000470280 NID2Q14112 1375 aa12.1□□□□□ -0.47
LDHB-205ENST00000470280 TRIOBPQ9H2D6 2365 aa12.1□□□□□ -0.47
LDHB-205ENST00000470280 A6NJR5 290 aa12.1□□□□□ -0.47
LDHB-205ENST00000470280 PIK3CDO00329 1044 aa12.1□□□□□ -0.47
LDHB-205ENST00000470280 SORBS3O60504 671 aa12.1□□□□□ -0.47
LDHB-205ENST00000470280 MYL3P08590 195 aa12.1□□□□□ -0.47
LDHB-205ENST00000470280 EVCP57679 992 aa12.1□□□□□ -0.47
LDHB-205ENST00000470280 SP2Q02086 613 aa12.1□□□□□ -0.47
LDHB-205ENST00000470280 ITGA7Q13683 1181 aa12.1□□□□□ -0.47
LDHB-205ENST00000470280 NTRK3Q16288 839 aa12.1□□□□□ -0.47
LDHB-205ENST00000470280 FAM126BQ8IXS8 530 aa12.1□□□□□ -0.47
LDHB-205ENST00000470280 SMARCC2Q8TAQ2 1214 aa12.1□□□□□ -0.47
LDHB-205ENST00000470280 AFG1LQ8WV93 481 aa12.1□□□□□ -0.47
LDHB-205ENST00000470280 BADQ92934 168 aa12.1□□□□□ -0.47
LDHB-205ENST00000470280 TOX2Q96NM4 488 aa12.1□□□□□ -0.47
LDHB-205ENST00000470280 TM6SF1Q9BZW5 370 aa12.1□□□□□ -0.47
LDHB-205ENST00000470280 PSTPIP2Q9H939 334 aa12.1□□□□□ -0.47
LDHB-205ENST00000470280 NCOA5Q9HCD5 579 aaKnown RBP12.1□□□□□ -0.47
LDHB-205ENST00000470280 MRVI1Q9Y6F6 885 aa12.1□□□□□ -0.47
LDHB-205ENST00000470280 LTBP2Q14767 1821 aa12.09□□□□□ -0.47
LDHB-205ENST00000470280 DCDC2CA8MYV0 355 aa12.09□□□□□ -0.47
LDHB-205ENST00000470280 STXBP3O00186 592 aa12.09□□□□□ -0.47
LDHB-205ENST00000470280 KIAA0355O15063 1070 aa12.09□□□□□ -0.47
LDHB-205ENST00000470280 ADAMTS3O15072 1205 aa12.09□□□□□ -0.47
LDHB-205ENST00000470280 ZEB2O60315 1214 aa12.09□□□□□ -0.47
LDHB-205ENST00000470280 CABYRO75952 493 aa12.09□□□□□ -0.47
LDHB-205ENST00000470280 GH1P01241 217 aa12.09□□□□□ -0.47
LDHB-205ENST00000470280 PDIA3P30101 505 aaKnown RBP12.09□□□□□ -0.47
LDHB-205ENST00000470280 CCND2P30279 289 aa12.09□□□□□ -0.47
LDHB-205ENST00000470280 CPT1AP50416 773 aa12.09□□□□□ -0.47
LDHB-205ENST00000470280 SEMA3FQ13275 785 aa12.09□□□□□ -0.47
LDHB-205ENST00000470280 PKN1Q16512 942 aa12.09□□□□□ -0.47
LDHB-205ENST00000470280 CUL5Q93034 780 aa12.09□□□□□ -0.47
LDHB-205ENST00000470280 PHF12Q96QT6 1004 aa12.09□□□□□ -0.47
LDHB-205ENST00000470280 UBE2OQ9C0C9 1292 aaKnown RBP12.09□□□□□ -0.47
LDHB-205ENST00000470280 TMEM39AQ9NV64 488 aa12.09□□□□□ -0.47
LDHB-205ENST00000470280 POLR3EQ9NVU0 708 aa12.09□□□□□ -0.47
LDHB-205ENST00000470280 RTEL1Q9NZ71 1219 aa12.09□□□□□ -0.47
LDHB-205ENST00000470280 PRKAG2Q9UGJ0 569 aa12.09□□□□□ -0.47
LDHB-205ENST00000470280 TBX21Q9UL17 535 aa12.09□□□□□ -0.47
LDHB-205ENST00000470280 CYP46A1Q9Y6A2 500 aa12.09□□□□□ -0.47
LDHB-205ENST00000470280 SOX1O00570 391 aaPredicted RBP12.08□□□□□ -0.48
LDHB-205ENST00000470280 CD4P01730 458 aa12.08□□□□□ -0.48
LDHB-205ENST00000470280 MMP3P08254 477 aa12.08□□□□□ -0.48
LDHB-205ENST00000470280 UBA1P22314 1058 aaKnown RBP12.08□□□□□ -0.48
LDHB-205ENST00000470280 EPHB4P54760 987 aa12.08□□□□□ -0.48
LDHB-205ENST00000470280 NAPAP54920 295 aa12.08□□□□□ -0.48
LDHB-205ENST00000470280 CCT2P78371 535 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms