RNA–Protein interactions for RNA: ENST00000470086.5

LSM2-210, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 713 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-210ENST00000470086 USP24Q9UPU5 2620 aa9.85□□□□□ -0.83
LSM2-210ENST00000470086 USP17L12C9JPN9 530 aa9.85□□□□□ -0.83
LSM2-210ENST00000470086 USP17L21D6R901 530 aa9.85□□□□□ -0.83
LSM2-210ENST00000470086 HTRA4P83105 476 aaPredicted RBP9.85□□□□□ -0.83
LSM2-210ENST00000470086 TRIM71Q2Q1W2 868 aaKnown RBP9.85□□□□□ -0.83
LSM2-210ENST00000470086 DUSP28Q4G0W2 176 aa9.85□□□□□ -0.83
LSM2-210ENST00000470086 SLC9C2Q5TAH2 1124 aa9.85□□□□□ -0.83
LSM2-210ENST00000470086 CNKSR3Q6P9H4 555 aa9.85□□□□□ -0.83
LSM2-210ENST00000470086 LRRC8DQ7L1W4 858 aa9.85□□□□□ -0.83
LSM2-210ENST00000470086 FAM9BQ8IZU0 186 aa9.85□□□□□ -0.83
LSM2-210ENST00000470086 FBXL6Q8N531 539 aa9.85□□□□□ -0.83
LSM2-210ENST00000470086 MORC4Q8TE76 937 aa9.85□□□□□ -0.83
LSM2-210ENST00000470086 SSH3Q8TE77 659 aa9.85□□□□□ -0.83
LSM2-210ENST00000470086 RAD9AQ99638 391 aa9.85□□□□□ -0.83
LSM2-210ENST00000470086 ZBED2Q9BTP6 218 aa9.85□□□□□ -0.83
LSM2-210ENST00000470086 ACAD9Q9H845 621 aa9.85□□□□□ -0.83
LSM2-210ENST00000470086 CYP39A1Q9NYL5 469 aa9.85□□□□□ -0.83
LSM2-210ENST00000470086 PTPRZ1P23471 2315 aaPredicted RBP9.85□□□□□ -0.83
LSM2-210ENST00000470086 ASPMQ8IZT6 3477 aa9.85□□□□□ -0.83
LSM2-210ENST00000470086 GNAI3P08754 354 aa9.84□□□□□ -0.83
LSM2-210ENST00000470086 TRIM27P14373 513 aa9.84□□□□□ -0.83
LSM2-210ENST00000470086 ZXDAP98168 799 aa9.84□□□□□ -0.83
LSM2-210ENST00000470086 TIGD5Q53EQ6 642 aa9.84□□□□□ -0.83
LSM2-210ENST00000470086 CTR9Q6PD62 1173 aa9.84□□□□□ -0.83
LSM2-210ENST00000470086 SLC30A10Q6XR72 485 aa9.84□□□□□ -0.83
LSM2-210ENST00000470086 KIAA1211Q6ZU35 1233 aa9.84□□□□□ -0.83
LSM2-210ENST00000470086 PRPF38AQ8NAV1 312 aaKnown RBP9.84□□□□□ -0.83
LSM2-210ENST00000470086 CHST13Q8NET6 341 aa9.84□□□□□ -0.83
LSM2-210ENST00000470086 OR6J1Q8NGC5 347 aa9.84□□□□□ -0.83
LSM2-210ENST00000470086 KAT2BQ92831 832 aa9.84□□□□□ -0.83
LSM2-210ENST00000470086 ATOH1Q92858 354 aaPredicted RBP9.84□□□□□ -0.83
LSM2-210ENST00000470086 MTG1Q9BT17 334 aaPredicted RBP9.84□□□□□ -0.83
LSM2-210ENST00000470086 FSD1Q9BTV5 496 aa9.84□□□□□ -0.83
LSM2-210ENST00000470086 API5Q9BZZ5 524 aaKnown RBP9.84□□□□□ -0.83
LSM2-210ENST00000470086 SMOC2Q9H3U7 446 aa9.84□□□□□ -0.83
LSM2-210ENST00000470086 KANSL2Q9H9L4 492 aa9.84□□□□□ -0.83
LSM2-210ENST00000470086 C2orf16Q68DN1 1984 aa9.83□□□□□ -0.84
LSM2-210ENST00000470086 PROB1E7EW31 1015 aa9.83□□□□□ -0.84
LSM2-210ENST00000470086 H3BNC9 293 aa9.83□□□□□ -0.84
LSM2-210ENST00000470086 GOLIM4O00461 696 aa9.83□□□□□ -0.84
LSM2-210ENST00000470086 GNAI2P04899 355 aa9.83□□□□□ -0.84
LSM2-210ENST00000470086 SUPT20HL2P0C7V6 817 aa9.83□□□□□ -0.84
LSM2-210ENST00000470086 CKBP12277 381 aa9.83□□□□□ -0.84
LSM2-210ENST00000470086 ALDH5A1P51649 535 aaPredicted RBP9.83□□□□□ -0.84
LSM2-210ENST00000470086 CHMP4BP1P59074 171 aa9.83□□□□□ -0.84
LSM2-210ENST00000470086 RBM10P98175 930 aaKnown RBP9.83□□□□□ -0.84
LSM2-210ENST00000470086 ZNF200P98182 395 aaPredicted RBP9.83□□□□□ -0.84
LSM2-210ENST00000470086 RBL2Q08999 1139 aa9.83□□□□□ -0.84
LSM2-210ENST00000470086 GPM6BQ13491 265 aa9.83□□□□□ -0.84
LSM2-210ENST00000470086 PTGISQ16647 500 aa9.83□□□□□ -0.84
LSM2-210ENST00000470086 PUS10Q3MIT2 529 aaKnown RBP9.83□□□□□ -0.84
LSM2-210ENST00000470086 NFRKBQ6P4R8 1299 aa9.83□□□□□ -0.84
LSM2-210ENST00000470086 ADGRD2Q7Z7M1 963 aa9.83□□□□□ -0.84
LSM2-210ENST00000470086 CERS3Q8IU89 383 aa9.83□□□□□ -0.84
LSM2-210ENST00000470086 TRMT2AQ8IZ69 625 aaKnown RBP9.83□□□□□ -0.84
LSM2-210ENST00000470086 AFAP1L1Q8TED9 768 aa9.83□□□□□ -0.84
LSM2-210ENST00000470086 MSLNLQ96KJ4 702 aa9.83□□□□□ -0.84
LSM2-210ENST00000470086 CCDC17Q96LX7 622 aa9.83□□□□□ -0.84
LSM2-210ENST00000470086 NSUN3Q9H649 340 aaKnown RBP9.83□□□□□ -0.84
LSM2-210ENST00000470086 POLR3EQ9NVU0 708 aa9.83□□□□□ -0.84
LSM2-210ENST00000470086 COG6Q9Y2V7 657 aa9.83□□□□□ -0.84
LSM2-210ENST00000470086 Q9Y3F1 56 aa9.83□□□□□ -0.84
LSM2-210ENST00000470086 PCDHGC5Q9Y5F6 944 aa9.83□□□□□ -0.84
LSM2-210ENST00000470086 RBM47A0AV96 593 aaKnown RBP9.82□□□□□ -0.84
LSM2-210ENST00000470086 LOC730098B7Z3J9 87 aa9.82□□□□□ -0.84
LSM2-210ENST00000470086 STXBP3O00186 592 aa9.82□□□□□ -0.84
LSM2-210ENST00000470086 NFIBO00712 420 aa9.82□□□□□ -0.84
LSM2-210ENST00000470086 GRM6O15303 877 aa9.82□□□□□ -0.84
LSM2-210ENST00000470086 ZEB2O60315 1214 aa9.82□□□□□ -0.84
LSM2-210ENST00000470086 ZBED4O75132 1171 aa9.82□□□□□ -0.84
LSM2-210ENST00000470086 GLP2RO95838 553 aa9.82□□□□□ -0.84
LSM2-210ENST00000470086 ALAS1P13196 640 aa9.82□□□□□ -0.84
LSM2-210ENST00000470086 SELPP16109 830 aa9.82□□□□□ -0.84
LSM2-210ENST00000470086 ID4P47928 161 aa9.82□□□□□ -0.84
LSM2-210ENST00000470086 OS9Q13438 667 aaPredicted RBP9.82□□□□□ -0.84
LSM2-210ENST00000470086 SMAD4Q13485 552 aaKnown RBP9.82□□□□□ -0.84
LSM2-210ENST00000470086 CAMK1Q14012 370 aa9.82□□□□□ -0.84
LSM2-210ENST00000470086 ZNF618Q5T7W0 954 aa9.82□□□□□ -0.84
LSM2-210ENST00000470086 IQSEC1Q6DN90 963 aa9.82□□□□□ -0.84
LSM2-210ENST00000470086 ERMP1Q7Z2K6 904 aa9.82□□□□□ -0.84
LSM2-210ENST00000470086 FBXO11Q86XK2 927 aa9.82□□□□□ -0.84
LSM2-210ENST00000470086 MYOCDQ8IZQ8 938 aa9.82□□□□□ -0.84
LSM2-210ENST00000470086 CEP95Q96GE4 821 aa9.82□□□□□ -0.84
LSM2-210ENST00000470086 TRERF1Q96PN7 1200 aa9.82□□□□□ -0.84
LSM2-210ENST00000470086 DNAJC2Q99543 621 aaKnown RBP9.82□□□□□ -0.84
LSM2-210ENST00000470086 WDR11Q9BZH6 1224 aa9.82□□□□□ -0.84
LSM2-210ENST00000470086 EPB41L4AQ9HCS5 686 aaPredicted RBP9.82□□□□□ -0.84
LSM2-210ENST00000470086 VTA1Q9NP79 307 aa9.82□□□□□ -0.84
LSM2-210ENST00000470086 CLEC1BQ9P126 229 aa9.82□□□□□ -0.84
LSM2-210ENST00000470086 FBXO40Q9UH90 709 aa9.82□□□□□ -0.84
LSM2-210ENST00000470086 GTF3C3Q9Y5Q9 886 aa9.82□□□□□ -0.84
LSM2-210ENST00000470086 COL4A3Q01955 1670 aa9.82□□□□□ -0.84
LSM2-210ENST00000470086 TTC3P53804 2025 aa9.82□□□□□ -0.84
LSM2-210ENST00000470086 CEP250Q9BV73 2442 aa9.81□□□□□ -0.84
LSM2-210ENST00000470086 SPEGQ15772 3267 aa9.81□□□□□ -0.84
LSM2-210ENST00000470086 PLIN4Q96Q06 1357 aa9.81□□□□□ -0.84
LSM2-210ENST00000470086 ASB14A6NK59 587 aa9.81□□□□□ -0.84
LSM2-210ENST00000470086 IGSF3O75054 1194 aa9.81□□□□□ -0.84
LSM2-210ENST00000470086 PRDM1O75626 825 aa9.81□□□□□ -0.84
LSM2-210ENST00000470086 SURF6O75683 361 aaKnown RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms