RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 MYOCDQ8IZQ8 938 aa14.24□□□□□ -0.13
LSM2-209ENST00000470083 IRF2BPLQ9H1B7 796 aa14.24□□□□□ -0.13
LSM2-209ENST00000470083 ALG13Q9NP73 1137 aaKnown RBP14.24□□□□□ -0.13
LSM2-209ENST00000470083 FAM86C1Q9NVL1 165 aa14.24□□□□□ -0.13
LSM2-209ENST00000470083 GTF2IRD1Q9UHL9 959 aa14.24□□□□□ -0.13
LSM2-209ENST00000470083 NFIBO00712 420 aa14.23□□□□□ -0.13
LSM2-209ENST00000470083 LGR5O75473 907 aa14.23□□□□□ -0.13
LSM2-209ENST00000470083 TSPY3P0CV98 308 aa14.23□□□□□ -0.13
LSM2-209ENST00000470083 TSPY8P0CW00 308 aa14.23□□□□□ -0.13
LSM2-209ENST00000470083 TXNP10599 105 aaKnown RBP14.23□□□□□ -0.13
LSM2-209ENST00000470083 SMAD4Q13485 552 aaKnown RBP14.23□□□□□ -0.13
LSM2-209ENST00000470083 MBTPS1Q14703 1052 aa14.23□□□□□ -0.13
LSM2-209ENST00000470083 CLUL1Q15846 466 aa14.23□□□□□ -0.13
LSM2-209ENST00000470083 RCSD1Q6JBY9 416 aa14.23□□□□□ -0.13
LSM2-209ENST00000470083 FTSJ3Q8IY81 847 aaKnown RBP14.23□□□□□ -0.13
LSM2-209ENST00000470083 TMEM192Q8IY95 271 aa14.23□□□□□ -0.13
LSM2-209ENST00000470083 FBXL6Q8N531 539 aa14.23□□□□□ -0.13
LSM2-209ENST00000470083 KAT2BQ92831 832 aa14.23□□□□□ -0.13
LSM2-209ENST00000470083 MPHOSPH6Q99547 160 aaKnown RBP14.23□□□□□ -0.13
LSM2-209ENST00000470083 RIF1Q5UIP0 2472 aaKnown RBP14.23□□□□□ -0.13
LSM2-209ENST00000470083 EMSYQ7Z589 1322 aa14.22□□□□□ -0.13
LSM2-209ENST00000470083 PTPDC1A2A3K4 754 aa14.22□□□□□ -0.13
LSM2-209ENST00000470083 STXBP3O00186 592 aa14.22□□□□□ -0.13
LSM2-209ENST00000470083 PDE4BQ07343 736 aa14.22□□□□□ -0.13
LSM2-209ENST00000470083 DLX2Q07687 328 aaPredicted RBP14.22□□□□□ -0.13
LSM2-209ENST00000470083 PTK7Q13308 1070 aa14.22□□□□□ -0.13
LSM2-209ENST00000470083 TRIM71Q2Q1W2 868 aaKnown RBP14.22□□□□□ -0.13
LSM2-209ENST00000470083 ZNF618Q5T7W0 954 aa14.22□□□□□ -0.13
LSM2-209ENST00000470083 SLC30A10Q6XR72 485 aa14.22□□□□□ -0.13
LSM2-209ENST00000470083 AFG1LQ8WV93 481 aa14.22□□□□□ -0.13
LSM2-209ENST00000470083 CHMP4CQ96CF2 233 aa14.22□□□□□ -0.13
LSM2-209ENST00000470083 YME1L1Q96TA2 773 aa14.22□□□□□ -0.13
LSM2-209ENST00000470083 RANBP17Q9H2T7 1088 aaKnown RBP14.22□□□□□ -0.13
LSM2-209ENST00000470083 EPB41L4AQ9HCS5 686 aaPredicted RBP14.22□□□□□ -0.13
LSM2-209ENST00000470083 LCTP09848 1927 aa14.21□□□□□ -0.13
LSM2-209ENST00000470083 ARIH2O95376 493 aa14.21□□□□□ -0.13
LSM2-209ENST00000470083 MMP3P08254 477 aa14.21□□□□□ -0.13
LSM2-209ENST00000470083 CALML3P27482 149 aa14.21□□□□□ -0.13
LSM2-209ENST00000470083 TDO2P48775 406 aa14.21□□□□□ -0.13
LSM2-209ENST00000470083 PPP4R3BQ5MIZ7 849 aa14.21□□□□□ -0.13
LSM2-209ENST00000470083 ERMP1Q7Z2K6 904 aa14.21□□□□□ -0.13
LSM2-209ENST00000470083 C7orf31Q8N865 590 aa14.21□□□□□ -0.13
LSM2-209ENST00000470083 DBF4BQ8NFT6 615 aa14.21□□□□□ -0.13
LSM2-209ENST00000470083 DNERQ8NFT8 737 aa14.21□□□□□ -0.13
LSM2-209ENST00000470083 HDAC6Q9UBN7 1215 aa14.21□□□□□ -0.13
LSM2-209ENST00000470083 MYH4Q9Y623 1939 aa14.21□□□□□ -0.14
LSM2-209ENST00000470083 COL4A6Q14031 1691 aa14.2□□□□□ -0.14
LSM2-209ENST00000470083 TBX10O75333 385 aa14.2□□□□□ -0.14
LSM2-209ENST00000470083 RLBP1P12271 317 aa14.2□□□□□ -0.14
LSM2-209ENST00000470083 CASTP20810 708 aaKnown RBP14.2□□□□□ -0.14
LSM2-209ENST00000470083 ZXDAP98168 799 aa14.2□□□□□ -0.14
LSM2-209ENST00000470083 TFAP4Q01664 338 aa14.2□□□□□ -0.14
LSM2-209ENST00000470083 HYAL1Q12794 435 aa14.2□□□□□ -0.14
LSM2-209ENST00000470083 CCDC62Q6P9F0 684 aa14.2□□□□□ -0.14
LSM2-209ENST00000470083 RNF207Q6ZRF8 634 aa14.2□□□□□ -0.14
LSM2-209ENST00000470083 CLEC4DQ8WXI8 215 aa14.2□□□□□ -0.14
LSM2-209ENST00000470083 ATOH1Q92858 354 aaPredicted RBP14.2□□□□□ -0.14
LSM2-209ENST00000470083 WNT8BQ93098 351 aa14.2□□□□□ -0.14
LSM2-209ENST00000470083 CD207Q9UJ71 328 aa14.2□□□□□ -0.14
LSM2-209ENST00000470083 MYO7AQ13402 2215 aa14.2□□□□□ -0.14
LSM2-209ENST00000470083 TRIP12Q14669 1992 aaPredicted RBP14.2□□□□□ -0.14
LSM2-209ENST00000470083 DMDP11532 3685 aa14.19□□□□□ -0.14
LSM2-209ENST00000470083 B4DLN1 442 aa14.19□□□□□ -0.14
LSM2-209ENST00000470083 PROB1E7EW31 1015 aa14.19□□□□□ -0.14
LSM2-209ENST00000470083 RBAK-RBAKDNI3L0D1 243 aa14.19□□□□□ -0.14
LSM2-209ENST00000470083 GH1P01241 217 aa14.19□□□□□ -0.14
LSM2-209ENST00000470083 MRPL12P52815 198 aaKnown RBP14.19□□□□□ -0.14
LSM2-209ENST00000470083 RPS6P62753 249 aaKnown RBP14.19□□□□□ -0.14
LSM2-209ENST00000470083 ARHGAP1Q07960 439 aa14.19□□□□□ -0.14
LSM2-209ENST00000470083 PLEKHG4Q58EX7 1191 aa14.19□□□□□ -0.14
LSM2-209ENST00000470083 RASGRP2Q7LDG7 609 aa14.19□□□□□ -0.14
LSM2-209ENST00000470083 TOP1MTQ969P6 601 aa14.19□□□□□ -0.14
LSM2-209ENST00000470083 OSBP2Q969R2 916 aa14.19□□□□□ -0.14
LSM2-209ENST00000470083 KATNAL1Q9BW62 490 aa14.19□□□□□ -0.14
LSM2-209ENST00000470083 LMAN2LQ9H0V9 348 aa14.19□□□□□ -0.14
LSM2-209ENST00000470083 BCL11AQ9H165 835 aa14.19□□□□□ -0.14
LSM2-209ENST00000470083 STX8Q9UNK0 236 aa14.19□□□□□ -0.14
LSM2-209ENST00000470083 VPS13AQ96RL7 3174 aa14.18□□□□□ -0.14
LSM2-209ENST00000470083 FAM186AA6NE01 2351 aa14.18□□□□□ -0.14
LSM2-209ENST00000470083 C5orf67F2Z3F1 127 aa14.18□□□□□ -0.14
LSM2-209ENST00000470083 EYA4O95677 639 aa14.18□□□□□ -0.14
LSM2-209ENST00000470083 F2P00734 622 aa14.18□□□□□ -0.14
LSM2-209ENST00000470083 GNAT2P19087 354 aa14.18□□□□□ -0.14
LSM2-209ENST00000470083 VCPP55072 806 aaKnown RBP14.18□□□□□ -0.14
LSM2-209ENST00000470083 SIGLEC14Q08ET2 396 aa14.18□□□□□ -0.14
LSM2-209ENST00000470083 DGKDQ16760 1214 aa14.18□□□□□ -0.14
LSM2-209ENST00000470083 BTNL9Q6UXG8 535 aa14.18□□□□□ -0.14
LSM2-209ENST00000470083 APPBP2Q92624 585 aa14.18□□□□□ -0.14
LSM2-209ENST00000470083 C11orf84Q9BUA3 381 aaPredicted RBP14.18□□□□□ -0.14
LSM2-209ENST00000470083 PNMA2Q9UL42 364 aa14.18□□□□□ -0.14
LSM2-209ENST00000470083 RSPH10B2B2RC85 870 aa14.17□□□□□ -0.14
LSM2-209ENST00000470083 LOC730098B7Z3J9 87 aa14.17□□□□□ -0.14
LSM2-209ENST00000470083 GPAA1O43292 621 aa14.17□□□□□ -0.14
LSM2-209ENST00000470083 RAB11FIP3O75154 756 aa14.17□□□□□ -0.14
LSM2-209ENST00000470083 RB1P06400 928 aa14.17□□□□□ -0.14
LSM2-209ENST00000470083 RSPH10BP0C881 870 aa14.17□□□□□ -0.14
LSM2-209ENST00000470083 CTNNB1P35222 781 aa14.17□□□□□ -0.14
LSM2-209ENST00000470083 PSEN2P49810 448 aa14.17□□□□□ -0.14
LSM2-209ENST00000470083 MFSD10Q14728 455 aa14.17□□□□□ -0.14
LSM2-209ENST00000470083 CBX2Q14781 532 aaPredicted RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms