RNA–Protein interactions for RNA: ENST00000469930.1

BRAF-202, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene BRAF, Length 1,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-202ENST00000469930 SRRDQ9UH36 339 aa23.65■■□□□ 1.38
BRAF-202ENST00000469930 CFAP45Q9UL16 551 aa23.65■■□□□ 1.38
BRAF-202ENST00000469930 MYH15Q9Y2K3 1946 aa23.65■■□□□ 1.38
BRAF-202ENST00000469930 DOCK3Q8IZD9 2030 aa23.64■■□□□ 1.38
BRAF-202ENST00000469930 MEIS1O00470 390 aa23.64■■□□□ 1.37
BRAF-202ENST00000469930 NASPP49321 788 aaPredicted RBP23.64■■□□□ 1.37
BRAF-202ENST00000469930 CAP1Q01518 475 aa23.64■■□□□ 1.37
BRAF-202ENST00000469930 LETM2Q2VYF4 491 aa23.64■■□□□ 1.37
BRAF-202ENST00000469930 CEP55Q53EZ4 464 aa23.64■■□□□ 1.37
BRAF-202ENST00000469930 IL31RAQ8NI17 732 aa23.64■■□□□ 1.37
BRAF-202ENST00000469930 TNPO1Q92973 898 aaKnown RBP23.64■■□□□ 1.37
BRAF-202ENST00000469930 MXRA8Q9BRK3 442 aa23.64■■□□□ 1.37
BRAF-202ENST00000469930 RTEL1Q9NZ71 1219 aa23.64■■□□□ 1.37
BRAF-202ENST00000469930 IGLV3-22A0A075B6J6 115 aa23.63■■□□□ 1.37
BRAF-202ENST00000469930 LAD1O00515 517 aa23.63■■□□□ 1.37
BRAF-202ENST00000469930 ANO1Q5XXA6 986 aa23.63■■□□□ 1.37
BRAF-202ENST00000469930 FAM173BQ6P4H8 233 aa23.63■■□□□ 1.37
BRAF-202ENST00000469930 INPP4AQ96PE3 977 aaPredicted RBP23.63■■□□□ 1.37
BRAF-202ENST00000469930 TINF2Q9BSI4 451 aa23.63■■□□□ 1.37
BRAF-202ENST00000469930 JADE2Q9NQC1 790 aa23.63■■□□□ 1.37
BRAF-202ENST00000469930 CEP131Q9UPN4 1083 aa23.63■■□□□ 1.37
BRAF-202ENST00000469930 CASP8AP2Q9UKL3 1982 aa23.63■■□□□ 1.37
BRAF-202ENST00000469930 TBX3O15119 743 aa23.62■■□□□ 1.37
BRAF-202ENST00000469930 FLT3LGP49771 235 aa23.62■■□□□ 1.37
BRAF-202ENST00000469930 SETQ01105 290 aaPredicted RBP23.62■■□□□ 1.37
BRAF-202ENST00000469930 PDE4DQ08499 809 aa23.62■■□□□ 1.37
BRAF-202ENST00000469930 LENG9Q96B70 501 aa23.62■■□□□ 1.37
BRAF-202ENST00000469930 GPRASP2Q96D09 838 aa23.62■■□□□ 1.37
BRAF-202ENST00000469930 USP28Q96RU2 1077 aa23.62■■□□□ 1.37
BRAF-202ENST00000469930 PCDHB6Q9Y5E3 794 aa23.62■■□□□ 1.37
BRAF-202ENST00000469930 FAM86B1E9PN63 330 aa23.61■■□□□ 1.37
BRAF-202ENST00000469930 WNT7AO00755 349 aa23.61■■□□□ 1.37
BRAF-202ENST00000469930 CCNT1O60563 726 aaKnown RBP23.61■■□□□ 1.37
BRAF-202ENST00000469930 YEATS4O95619 227 aa23.61■■□□□ 1.37
BRAF-202ENST00000469930 FAM86B2P0C5J1 330 aa23.61■■□□□ 1.37
BRAF-202ENST00000469930 ITGB5P18084 799 aa23.61■■□□□ 1.37
BRAF-202ENST00000469930 ICAM3P32942 547 aa23.61■■□□□ 1.37
BRAF-202ENST00000469930 ZNF76P36508 570 aa23.61■■□□□ 1.37
BRAF-202ENST00000469930 KRT85P78386 507 aa23.61■■□□□ 1.37
BRAF-202ENST00000469930 DNM1Q05193 864 aaKnown RBP23.61■■□□□ 1.37
BRAF-202ENST00000469930 ARMCX2Q7L311 632 aa23.61■■□□□ 1.37
BRAF-202ENST00000469930 C4orf32Q8N8J7 132 aa23.61■■□□□ 1.37
BRAF-202ENST00000469930 DDX25Q9UHL0 483 aaKnown RBP23.61■■□□□ 1.37
BRAF-202ENST00000469930 NRBP1Q9UHY1 535 aa23.61■■□□□ 1.37
BRAF-202ENST00000469930 RCOR1Q9UKL0 485 aa23.61■■□□□ 1.37
BRAF-202ENST00000469930 GABRQQ9UN88 632 aa23.61■■□□□ 1.37
BRAF-202ENST00000469930 ZSWIM8A7E2V4 1837 aa23.61■■□□□ 1.37
BRAF-202ENST00000469930 LRRC37A2A6NM11 1700 aa23.6■■□□□ 1.37
BRAF-202ENST00000469930 TDP2O95551 362 aa23.6■■□□□ 1.37
BRAF-202ENST00000469930 MYCLP12524 364 aaPredicted RBP23.6■■□□□ 1.37
BRAF-202ENST00000469930 UBXN2AP68543 259 aa23.6■■□□□ 1.37
BRAF-202ENST00000469930 PRKCZQ05513 592 aa23.6■■□□□ 1.37
BRAF-202ENST00000469930 SLC39A14Q15043 492 aa23.6■■□□□ 1.37
BRAF-202ENST00000469930 PTPAQ15257 358 aa23.6■■□□□ 1.37
BRAF-202ENST00000469930 SF3A1Q15459 793 aaKnown RBP23.6■■□□□ 1.37
BRAF-202ENST00000469930 GNPTABQ3T906 1256 aa23.6■■□□□ 1.37
BRAF-202ENST00000469930 KCNV1Q6PIU1 500 aa23.6■■□□□ 1.37
BRAF-202ENST00000469930 NLRX1Q86UT6 975 aa23.6■■□□□ 1.37
BRAF-202ENST00000469930 PXYLP1Q8TE99 480 aa23.6■■□□□ 1.37
BRAF-202ENST00000469930 CDHR1Q96JP9 859 aa23.6■■□□□ 1.37
BRAF-202ENST00000469930 SCAND2PQ9GZW5 306 aaPredicted RBP23.6■■□□□ 1.37
BRAF-202ENST00000469930 VTA1Q9NP79 307 aa23.6■■□□□ 1.37
BRAF-202ENST00000469930 KCNMB3Q9NPA1 279 aa23.6■■□□□ 1.37
BRAF-202ENST00000469930 RBM47A0AV96 593 aaKnown RBP23.59■■□□□ 1.37
BRAF-202ENST00000469930 RGS20O76081 388 aa23.59■■□□□ 1.37
BRAF-202ENST00000469930 SNAI1O95863 264 aaPredicted RBP23.59■■□□□ 1.37
BRAF-202ENST00000469930 TGFB3P10600 412 aa23.59■■□□□ 1.37
BRAF-202ENST00000469930 HSPA8P11142 646 aaKnown RBP23.59■■□□□ 1.37
BRAF-202ENST00000469930 CYP2B6P20813 491 aa23.59■■□□□ 1.37
BRAF-202ENST00000469930 PRPHP41219 470 aa23.59■■□□□ 1.37
BRAF-202ENST00000469930 ATP2C1P98194 919 aaPredicted RBP23.59■■□□□ 1.37
BRAF-202ENST00000469930 ZNF174Q15697 407 aa23.59■■□□□ 1.37
BRAF-202ENST00000469930 ARL6IP4Q66PJ3 421 aaKnown RBP23.59■■□□□ 1.37
BRAF-202ENST00000469930 LINC00301Q8NCQ3 95 aa23.59■■□□□ 1.37
BRAF-202ENST00000469930 FAM20AQ96MK3 541 aa23.59■■□□□ 1.37
BRAF-202ENST00000469930 MTMR9Q96QG7 549 aa23.59■■□□□ 1.37
BRAF-202ENST00000469930 KATNBL1Q9H079 304 aa23.59■■□□□ 1.37
BRAF-202ENST00000469930 ABHD16BQ9H3Z7 469 aa23.59■■□□□ 1.37
BRAF-202ENST00000469930 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.59■■□□□ 1.37
BRAF-202ENST00000469930 TSKSQ9UJT2 592 aa23.59■■□□□ 1.37
BRAF-202ENST00000469930 CLIC4Q9Y696 253 aa23.59■■□□□ 1.37
BRAF-202ENST00000469930 SPATA31C2B4DYI2 1134 aa23.58■■□□□ 1.37
BRAF-202ENST00000469930 NEMFO60524 1076 aa23.58■■□□□ 1.37
BRAF-202ENST00000469930 ATP2B1P20020 1258 aa23.58■■□□□ 1.37
BRAF-202ENST00000469930 MCM7P33993 719 aa23.58■■□□□ 1.37
BRAF-202ENST00000469930 CTCFP49711 727 aaPredicted RBP23.58■■□□□ 1.37
BRAF-202ENST00000469930 PLA2G4DQ86XP0 818 aa23.58■■□□□ 1.37
BRAF-202ENST00000469930 CYP2W1Q8TAV3 490 aa23.58■■□□□ 1.37
BRAF-202ENST00000469930 FIBPO43427 364 aa23.57■■□□□ 1.36
BRAF-202ENST00000469930 SLC37A4O43826 429 aa23.57■■□□□ 1.36
BRAF-202ENST00000469930 PPP6R2O75170 966 aa23.57■■□□□ 1.36
BRAF-202ENST00000469930 PTGDRQ13258 359 aa23.57■■□□□ 1.36
BRAF-202ENST00000469930 NBR1Q14596 966 aa23.57■■□□□ 1.36
BRAF-202ENST00000469930 PRR16Q569H4 304 aa23.57■■□□□ 1.36
BRAF-202ENST00000469930 ETNPPLQ8TBG4 499 aa23.57■■□□□ 1.36
BRAF-202ENST00000469930 SENP7Q9BQF6 1050 aa23.57■■□□□ 1.36
BRAF-202ENST00000469930 FLRT1Q9NZU1 646 aa23.57■■□□□ 1.36
BRAF-202ENST00000469930 TFIP11Q9UBB9 837 aaKnown RBP23.57■■□□□ 1.36
BRAF-202ENST00000469930 FOXN1O15353 648 aa23.56■■□□□ 1.36
BRAF-202ENST00000469930 BAG4O95429 457 aaKnown RBP23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms