RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 TBCKQ8TEA7 893 aa16.89■□□□□ 0.29
COL9A3-209ENST00000469852 IWS1Q96ST2 819 aa16.89■□□□□ 0.29
COL9A3-209ENST00000469852 BRMS1Q9HCU9 246 aa16.89■□□□□ 0.29
COL9A3-209ENST00000469852 PDGFCQ9NRA1 345 aa16.89■□□□□ 0.29
COL9A3-209ENST00000469852 WNT7AO00755 349 aa16.88■□□□□ 0.29
COL9A3-209ENST00000469852 ZNF865P0CJ78 1059 aaPredicted RBP16.88■□□□□ 0.29
COL9A3-209ENST00000469852 CYBAP13498 195 aa16.88■□□□□ 0.29
COL9A3-209ENST00000469852 PRKAR2AP13861 404 aaKnown RBP16.88■□□□□ 0.29
COL9A3-209ENST00000469852 CCND2P30279 289 aa16.88■□□□□ 0.29
COL9A3-209ENST00000469852 CCND3P30281 292 aaPredicted RBP16.88■□□□□ 0.29
COL9A3-209ENST00000469852 NONOQ15233 471 aaKnown RBP eCLIP16.88■□□□□ 0.29
COL9A3-209ENST00000469852 INF2Q27J81 1249 aa16.88■□□□□ 0.29
COL9A3-209ENST00000469852 SLC9C1Q4G0N8 1177 aa16.88■□□□□ 0.29
COL9A3-209ENST00000469852 TMEM63BQ5T3F8 832 aa16.88■□□□□ 0.29
COL9A3-209ENST00000469852 MFSD14CQ5VZR4 134 aa16.88■□□□□ 0.29
COL9A3-209ENST00000469852 PCNX4Q63HM2 1172 aa16.88■□□□□ 0.29
COL9A3-209ENST00000469852 KRT25Q7Z3Z0 450 aa16.88■□□□□ 0.29
COL9A3-209ENST00000469852 FOXP1Q9H334 677 aaPredicted RBP16.88■□□□□ 0.29
COL9A3-209ENST00000469852 RTEL1Q9NZ71 1219 aa16.88■□□□□ 0.29
COL9A3-209ENST00000469852 MTMR6Q9Y217 621 aa16.88■□□□□ 0.29
COL9A3-209ENST00000469852 LOC102724159A0A0B4J2E5 919 aa16.87■□□□□ 0.29
COL9A3-209ENST00000469852 CCDC194A0A1B0GVG4 234 aa16.87■□□□□ 0.29
COL9A3-209ENST00000469852 ADCY6O43306 1168 aa16.87■□□□□ 0.29
COL9A3-209ENST00000469852 STX6O43752 255 aa16.87■□□□□ 0.29
COL9A3-209ENST00000469852 PDCP20941 246 aa16.87■□□□□ 0.29
COL9A3-209ENST00000469852 PTGS1P23219 599 aa16.87■□□□□ 0.29
COL9A3-209ENST00000469852 U2AF2P26368 475 aaKnown RBP eCLIP16.87■□□□□ 0.29
COL9A3-209ENST00000469852 ACVR2BQ13705 512 aa16.87■□□□□ 0.29
COL9A3-209ENST00000469852 PWP2Q15269 919 aaKnown RBP16.87■□□□□ 0.29
COL9A3-209ENST00000469852 SAFBQ15424 915 aaKnown RBP eCLIP16.87■□□□□ 0.29
COL9A3-209ENST00000469852 STXBP2Q15833 593 aa16.87■□□□□ 0.29
COL9A3-209ENST00000469852 MCTP2Q6DN12 878 aa16.87■□□□□ 0.29
COL9A3-209ENST00000469852 MCTP1Q6DN14 999 aa16.87■□□□□ 0.29
COL9A3-209ENST00000469852 TAPT1Q6NXT6 567 aa16.87■□□□□ 0.29
COL9A3-209ENST00000469852 FERMT3Q86UX7 667 aa16.87■□□□□ 0.29
COL9A3-209ENST00000469852 CYP2W1Q8TAV3 490 aa16.87■□□□□ 0.29
COL9A3-209ENST00000469852 ZHX1Q9UKY1 873 aaPredicted RBP16.87■□□□□ 0.29
COL9A3-209ENST00000469852 BRCA2P51587 3418 aa16.87■□□□□ 0.29
COL9A3-209ENST00000469852 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.86■□□□□ 0.29
COL9A3-209ENST00000469852 FAM86B1E9PN63 330 aa16.86■□□□□ 0.29
COL9A3-209ENST00000469852 MYCP01106 439 aaPredicted RBP16.86■□□□□ 0.29
COL9A3-209ENST00000469852 FAM86B2P0C5J1 330 aa16.86■□□□□ 0.29
COL9A3-209ENST00000469852 ITGB5P18084 799 aa16.86■□□□□ 0.29
COL9A3-209ENST00000469852 SEMA3FQ13275 785 aa16.86■□□□□ 0.29
COL9A3-209ENST00000469852 MTFR1Q15390 333 aa16.86■□□□□ 0.29
COL9A3-209ENST00000469852 NOSTRINQ8IVI9 506 aa16.86■□□□□ 0.29
COL9A3-209ENST00000469852 LENG1Q96BZ8 264 aaPredicted RBP16.86■□□□□ 0.29
COL9A3-209ENST00000469852 ABHD16BQ9H3Z7 469 aa16.86■□□□□ 0.29
COL9A3-209ENST00000469852 EHMT1Q9H9B1 1298 aa16.86■□□□□ 0.29
COL9A3-209ENST00000469852 CNPY2Q9Y2B0 182 aa16.86■□□□□ 0.29
COL9A3-209ENST00000469852 UBIAD1Q9Y5Z9 338 aa16.86■□□□□ 0.29
COL9A3-209ENST00000469852 DOCK5Q9H7D0 1870 aa16.86■□□□□ 0.29
COL9A3-209ENST00000469852 FRMPD3Q5JV73 1810 aa16.85■□□□□ 0.29
COL9A3-209ENST00000469852 EIF3JO75822 258 aaKnown RBP16.85■□□□□ 0.29
COL9A3-209ENST00000469852 ARIH2O95376 493 aa16.85■□□□□ 0.29
COL9A3-209ENST00000469852 TDP2O95551 362 aa16.85■□□□□ 0.29
COL9A3-209ENST00000469852 CYP3A4P08684 503 aa16.85■□□□□ 0.29
COL9A3-209ENST00000469852 DDIT3P35638 169 aa16.85■□□□□ 0.29
COL9A3-209ENST00000469852 ADCYAP1R1P41586 468 aa16.85■□□□□ 0.29
COL9A3-209ENST00000469852 FOXD4L5Q5VV16 416 aaPredicted RBP16.85■□□□□ 0.29
COL9A3-209ENST00000469852 SEPT14Q6ZU15 432 aa16.85■□□□□ 0.29
COL9A3-209ENST00000469852 FOXD4L4Q8WXT5 416 aaPredicted RBP16.85■□□□□ 0.29
COL9A3-209ENST00000469852 ZNF333Q96JL9 665 aa16.85■□□□□ 0.29
COL9A3-209ENST00000469852 INPP4AQ96PE3 977 aaPredicted RBP16.85■□□□□ 0.29
COL9A3-209ENST00000469852 WDR11Q9BZH6 1224 aa16.85■□□□□ 0.29
COL9A3-209ENST00000469852 UNC93B1Q9H1C4 597 aa16.85■□□□□ 0.29
COL9A3-209ENST00000469852 VTA1Q9NP79 307 aa16.85■□□□□ 0.29
COL9A3-209ENST00000469852 IGLV3-22A0A075B6J6 115 aa16.84■□□□□ 0.29
COL9A3-209ENST00000469852 RBM47A0AV96 593 aaKnown RBP16.84■□□□□ 0.29
COL9A3-209ENST00000469852 B4DLN1 442 aa16.84■□□□□ 0.29
COL9A3-209ENST00000469852 RESTQ13127 1097 aa16.84■□□□□ 0.29
COL9A3-209ENST00000469852 GNL2Q13823 731 aaKnown RBP16.84■□□□□ 0.29
COL9A3-209ENST00000469852 NBR1Q14596 966 aa16.84■□□□□ 0.29
COL9A3-209ENST00000469852 LETM2Q2VYF4 491 aa16.84■□□□□ 0.29
COL9A3-209ENST00000469852 CCDC144BQ3MJ40 725 aa16.84■□□□□ 0.29
COL9A3-209ENST00000469852 GJC2Q5T442 439 aaPredicted RBP16.84■□□□□ 0.29
COL9A3-209ENST00000469852 PRPF38BQ5VTL8 546 aaKnown RBP16.84■□□□□ 0.29
COL9A3-209ENST00000469852 ANO1Q5XXA6 986 aa16.84■□□□□ 0.29
COL9A3-209ENST00000469852 XRRA1Q6P2D8 792 aa16.84■□□□□ 0.29
COL9A3-209ENST00000469852 LENG9Q96B70 501 aa16.84■□□□□ 0.29
COL9A3-209ENST00000469852 ARMC5Q96C12 935 aa16.84■□□□□ 0.29
COL9A3-209ENST00000469852 UIMC1Q96RL1 719 aa16.84■□□□□ 0.29
COL9A3-209ENST00000469852 MPHOSPH6Q99547 160 aaKnown RBP16.84■□□□□ 0.29
COL9A3-209ENST00000469852 MXRA8Q9BRK3 442 aa16.84■□□□□ 0.29
COL9A3-209ENST00000469852 ZDHHC9Q9Y397 364 aa16.84■□□□□ 0.29
COL9A3-209ENST00000469852 ARP10275 920 aa16.83■□□□□ 0.28
COL9A3-209ENST00000469852 CIITAP33076 1130 aa16.83■□□□□ 0.28
COL9A3-209ENST00000469852 TOB1P50616 345 aaPredicted RBP16.83■□□□□ 0.28
COL9A3-209ENST00000469852 CEP55Q53EZ4 464 aa16.83■□□□□ 0.28
COL9A3-209ENST00000469852 FAM173BQ6P4H8 233 aa16.83■□□□□ 0.28
COL9A3-209ENST00000469852 NEK8Q86SG6 692 aa16.83■□□□□ 0.28
COL9A3-209ENST00000469852 COPS5Q92905 334 aa16.83■□□□□ 0.28
COL9A3-209ENST00000469852 BCAS3Q9H6U6 928 aa16.83■□□□□ 0.28
COL9A3-209ENST00000469852 NRBP1Q9UHY1 535 aa16.83■□□□□ 0.28
COL9A3-209ENST00000469852 MYH15Q9Y2K3 1946 aa16.83■□□□□ 0.28
COL9A3-209ENST00000469852 POTEFA5A3E0 1075 aa16.82■□□□□ 0.28
COL9A3-209ENST00000469852 MEIS1O00470 390 aa16.82■□□□□ 0.28
COL9A3-209ENST00000469852 SLC37A4O43826 429 aa16.82■□□□□ 0.28
COL9A3-209ENST00000469852 CCL5P13501 91 aa16.82■□□□□ 0.28
COL9A3-209ENST00000469852 SMPD1P17405 629 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms