RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 PNMA6FA0A0J9YX94 578 aa18.91■□□□□ 0.62
COL9A3-208ENST00000469802 RGS20O76081 388 aa18.91■□□□□ 0.62
COL9A3-208ENST00000469802 DDAH1O94760 285 aa18.91■□□□□ 0.62
COL9A3-208ENST00000469802 HOXA13P31271 388 aaPredicted RBP18.91■□□□□ 0.62
COL9A3-208ENST00000469802 PTPN11Q06124 597 aaPredicted RBP18.91■□□□□ 0.62
COL9A3-208ENST00000469802 CENPQQ7L2Z9 268 aaPredicted RBP18.91■□□□□ 0.62
COL9A3-208ENST00000469802 ZNF654Q8IZM8 581 aa18.91■□□□□ 0.62
COL9A3-208ENST00000469802 SPZ1Q9BXG8 430 aa18.91■□□□□ 0.62
COL9A3-208ENST00000469802 PTPRSQ13332 1948 aa18.91■□□□□ 0.62
COL9A3-208ENST00000469802 FRMPD4Q14CM0 1322 aa18.91■□□□□ 0.62
COL9A3-208ENST00000469802 TET1Q8NFU7 2136 aa18.91■□□□□ 0.62
COL9A3-208ENST00000469802 SLC27A2O14975 620 aa18.9■□□□□ 0.62
COL9A3-208ENST00000469802 CYP2C9P11712 490 aa18.9■□□□□ 0.62
COL9A3-208ENST00000469802 CCL23P55773 120 aa18.9■□□□□ 0.62
COL9A3-208ENST00000469802 PGM5Q15124 567 aa18.9■□□□□ 0.62
COL9A3-208ENST00000469802 NECTIN1Q15223 517 aa18.9■□□□□ 0.62
COL9A3-208ENST00000469802 IL31RAQ8NI17 732 aa18.9■□□□□ 0.62
COL9A3-208ENST00000469802 KAT2BQ92831 832 aa18.9■□□□□ 0.62
COL9A3-208ENST00000469802 CXXC1Q9P0U4 656 aaPredicted RBP18.9■□□□□ 0.62
COL9A3-208ENST00000469802 SH2B2O14492 632 aaPredicted RBP18.89■□□□□ 0.61
COL9A3-208ENST00000469802 PRC1O43663 620 aa18.89■□□□□ 0.61
COL9A3-208ENST00000469802 HOXD8P13378 290 aaPredicted RBP18.89■□□□□ 0.61
COL9A3-208ENST00000469802 VSIG10LQ86VR7 867 aa18.89■□□□□ 0.61
COL9A3-208ENST00000469802 SESTD1Q86VW0 696 aa18.89■□□□□ 0.61
COL9A3-208ENST00000469802 SKAP1Q86WV1 359 aa18.89■□□□□ 0.61
COL9A3-208ENST00000469802 PPP1R13LQ8WUF5 828 aa18.89■□□□□ 0.61
COL9A3-208ENST00000469802 CTAGE1Q96RT6 745 aa18.89■□□□□ 0.61
COL9A3-208ENST00000469802 MYL10Q9BUA6 226 aa18.89■□□□□ 0.61
COL9A3-208ENST00000469802 PBX4Q9BYU1 374 aa18.89■□□□□ 0.61
COL9A3-208ENST00000469802 MRVI1Q9Y6F6 885 aa18.89■□□□□ 0.61
COL9A3-208ENST00000469802 GRXCR1A8MXD5 290 aa18.88■□□□□ 0.61
COL9A3-208ENST00000469802 GCOM1H8Y6P7 765 aaPredicted RBP18.88■□□□□ 0.61
COL9A3-208ENST00000469802 PITPNM1O00562 1244 aa18.88■□□□□ 0.61
COL9A3-208ENST00000469802 POLR2MP0CAP2 368 aa18.88■□□□□ 0.61
COL9A3-208ENST00000469802 SMARCA1P28370 1054 aa18.88■□□□□ 0.61
COL9A3-208ENST00000469802 MCM5P33992 734 aa18.88■□□□□ 0.61
COL9A3-208ENST00000469802 FAM47CQ5HY64 1035 aa18.88■□□□□ 0.61
COL9A3-208ENST00000469802 CREB3L3Q68CJ9 461 aa18.88■□□□□ 0.61
COL9A3-208ENST00000469802 CASC1Q6TDU7 716 aa18.88■□□□□ 0.61
COL9A3-208ENST00000469802 PPTC7Q8NI37 304 aa18.88■□□□□ 0.61
COL9A3-208ENST00000469802 MYLIPQ8WY64 445 aa18.88■□□□□ 0.61
COL9A3-208ENST00000469802 SCLYQ96I15 445 aa18.88■□□□□ 0.61
COL9A3-208ENST00000469802 TMEM87BQ96K49 555 aa18.88■□□□□ 0.61
COL9A3-208ENST00000469802 F2P00734 622 aa18.87■□□□□ 0.61
COL9A3-208ENST00000469802 FGBP02675 491 aa18.87■□□□□ 0.61
COL9A3-208ENST00000469802 PFKMP08237 780 aa18.87■□□□□ 0.61
COL9A3-208ENST00000469802 KIF5BP33176 963 aa18.87■□□□□ 0.61
COL9A3-208ENST00000469802 PBX2P40425 430 aa18.87■□□□□ 0.61
COL9A3-208ENST00000469802 LIFRP42702 1097 aa18.87■□□□□ 0.61
COL9A3-208ENST00000469802 DGKDQ16760 1214 aa18.87■□□□□ 0.61
COL9A3-208ENST00000469802 CTCFLQ8NI51 663 aaPredicted RBP18.87■□□□□ 0.61
COL9A3-208ENST00000469802 TIFAQ96CG3 184 aa18.87■□□□□ 0.61
COL9A3-208ENST00000469802 MTIF3Q9H2K0 278 aaKnown RBP18.87■□□□□ 0.61
COL9A3-208ENST00000469802 ANO2Q9NQ90 1003 aa18.87■□□□□ 0.61
COL9A3-208ENST00000469802 A0A0C4DFX4 3053 aa18.87■□□□□ 0.61
COL9A3-208ENST00000469802 MYO9BQ13459 2157 aa18.86■□□□□ 0.61
COL9A3-208ENST00000469802 MYCLP12524 364 aaPredicted RBP18.86■□□□□ 0.61
COL9A3-208ENST00000469802 CASTP20810 708 aaKnown RBP18.86■□□□□ 0.61
COL9A3-208ENST00000469802 CCND2P30279 289 aa18.86■□□□□ 0.61
COL9A3-208ENST00000469802 LAMC2Q13753 1193 aa18.86■□□□□ 0.61
COL9A3-208ENST00000469802 KCNV1Q6PIU1 500 aa18.86■□□□□ 0.61
COL9A3-208ENST00000469802 OTOP2Q7RTS6 562 aa18.86■□□□□ 0.61
COL9A3-208ENST00000469802 RPUSD2Q8IZ73 545 aaKnown RBP18.86■□□□□ 0.61
COL9A3-208ENST00000469802 TMTC2Q8N394 836 aa18.86■□□□□ 0.61
COL9A3-208ENST00000469802 LZTS2Q9BRK4 669 aa18.86■□□□□ 0.61
COL9A3-208ENST00000469802 ZNF576Q9H609 170 aa18.86■□□□□ 0.61
COL9A3-208ENST00000469802 PRUNE2Q8WUY3 3088 aa18.86■□□□□ 0.61
COL9A3-208ENST00000469802 CHD7Q9P2D1 2997 aa18.86■□□□□ 0.61
COL9A3-208ENST00000469802 HAS3O00219 553 aa18.85■□□□□ 0.61
COL9A3-208ENST00000469802 PLEKHA8P1O95397 391 aa18.85■□□□□ 0.61
COL9A3-208ENST00000469802 TGFB3P10600 412 aa18.85■□□□□ 0.61
COL9A3-208ENST00000469802 UBA1P22314 1058 aaKnown RBP18.85■□□□□ 0.61
COL9A3-208ENST00000469802 RFC2P35250 354 aa18.85■□□□□ 0.61
COL9A3-208ENST00000469802 GRIN2CQ14957 1233 aa18.85■□□□□ 0.61
COL9A3-208ENST00000469802 MYSM1Q5VVJ2 828 aa18.85■□□□□ 0.61
COL9A3-208ENST00000469802 GDF6Q6KF10 455 aaPredicted RBP18.85■□□□□ 0.61
COL9A3-208ENST00000469802 CUL9Q8IWT3 2517 aa18.85■□□□□ 0.61
COL9A3-208ENST00000469802 PIK3CDO00329 1044 aa18.84■□□□□ 0.61
COL9A3-208ENST00000469802 IQCF3P0C7M6 154 aa18.84■□□□□ 0.61
COL9A3-208ENST00000469802 ZNF286BP0CG31 522 aa18.84■□□□□ 0.61
COL9A3-208ENST00000469802 GNAQP50148 359 aa18.84■□□□□ 0.61
COL9A3-208ENST00000469802 SP2Q02086 613 aa18.84■□□□□ 0.61
COL9A3-208ENST00000469802 RBL2Q08999 1139 aa18.84■□□□□ 0.61
COL9A3-208ENST00000469802 RAB30Q15771 203 aa18.84■□□□□ 0.61
COL9A3-208ENST00000469802 PTGISQ16647 500 aa18.84■□□□□ 0.61
COL9A3-208ENST00000469802 CELF3Q5SZQ8 465 aaKnown RBP18.84■□□□□ 0.61
COL9A3-208ENST00000469802 SGMS1Q86VZ5 419 aa18.84■□□□□ 0.61
COL9A3-208ENST00000469802 FCHSD1Q86WN1 690 aa18.84■□□□□ 0.61
COL9A3-208ENST00000469802 DHX37Q8IY37 1157 aaKnown RBP18.84■□□□□ 0.61
COL9A3-208ENST00000469802 SRBD1Q8N5C6 995 aaKnown RBP18.84■□□□□ 0.61
COL9A3-208ENST00000469802 MAFAQ8NHW3 353 aaPredicted RBP18.84■□□□□ 0.61
COL9A3-208ENST00000469802 GPKOWQ92917 476 aaPredicted RBP eCLIP18.84■□□□□ 0.61
COL9A3-208ENST00000469802 RRP36Q96EU6 259 aaKnown RBP18.84■□□□□ 0.61
COL9A3-208ENST00000469802 INPP4AQ96PE3 977 aaPredicted RBP18.84■□□□□ 0.61
COL9A3-208ENST00000469802 KATNAL1Q9BW62 490 aa18.84■□□□□ 0.61
COL9A3-208ENST00000469802 GTF2IRD1Q9UHL9 959 aa18.84■□□□□ 0.61
COL9A3-208ENST00000469802 CCDC69A6NI79 296 aa18.83■□□□□ 0.6
COL9A3-208ENST00000469802 STAM2O75886 525 aa18.83■□□□□ 0.6
COL9A3-208ENST00000469802 GGPS1O95749 300 aa18.83■□□□□ 0.6
COL9A3-208ENST00000469802 CALM1P0DP23 149 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms