RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 RRP1BQ14684 758 aaKnown RBP10.51□□□□□ -0.73
TOP3A-203ENST00000469739 CDC37Q16543 378 aaPredicted RBP10.51□□□□□ -0.73
TOP3A-203ENST00000469739 KRT79Q5XKE5 535 aa10.51□□□□□ -0.73
TOP3A-203ENST00000469739 CCDC174Q6PII3 467 aa10.51□□□□□ -0.73
TOP3A-203ENST00000469739 POTEBQ6S5H4 581 aa10.51□□□□□ -0.73
TOP3A-203ENST00000469739 TBC1D5Q92609 795 aa10.51□□□□□ -0.73
TOP3A-203ENST00000469739 CNOT6LQ96LI5 555 aaKnown RBP10.51□□□□□ -0.73
TOP3A-203ENST00000469739 PNMA5Q96PV4 448 aa10.51□□□□□ -0.73
TOP3A-203ENST00000469739 CSRNP1Q96S65 589 aa10.51□□□□□ -0.73
TOP3A-203ENST00000469739 NOC4LQ9BVI4 516 aaKnown RBP10.51□□□□□ -0.73
TOP3A-203ENST00000469739 ZNF277Q9NRM2 450 aaPredicted RBP10.51□□□□□ -0.73
TOP3A-203ENST00000469739 ABHD10Q9NUJ1 306 aa10.51□□□□□ -0.73
TOP3A-203ENST00000469739 ZNF446Q9NWS9 450 aa10.51□□□□□ -0.73
TOP3A-203ENST00000469739 PCDHA12Q9UN75 941 aa10.51□□□□□ -0.73
TOP3A-203ENST00000469739 PNMA6FA0A0J9YX94 578 aa10.51□□□□□ -0.73
TOP3A-203ENST00000469739 F5H6K3 240 aa10.51□□□□□ -0.73
TOP3A-203ENST00000469739 CHMP2AO43633 222 aa10.51□□□□□ -0.73
TOP3A-203ENST00000469739 DNA2P51530 1060 aa10.51□□□□□ -0.73
TOP3A-203ENST00000469739 KLRC3Q07444 240 aa10.51□□□□□ -0.73
TOP3A-203ENST00000469739 TMEM266Q2M3C6 531 aa10.51□□□□□ -0.73
TOP3A-203ENST00000469739 ASPRV1Q53RT3 343 aa10.51□□□□□ -0.73
TOP3A-203ENST00000469739 SLC35F6Q8N357 371 aa10.51□□□□□ -0.73
TOP3A-203ENST00000469739 CUL5Q93034 780 aa10.51□□□□□ -0.73
TOP3A-203ENST00000469739 P2RX7Q99572 595 aaKnown RBP10.51□□□□□ -0.73
TOP3A-203ENST00000469739 DUSP9Q99956 384 aaKnown RBP10.51□□□□□ -0.73
TOP3A-203ENST00000469739 CCSER1Q9C0I3 900 aa10.51□□□□□ -0.73
TOP3A-203ENST00000469739 MMRN2Q9H8L6 949 aa10.51□□□□□ -0.73
TOP3A-203ENST00000469739 BLOC1S4Q9NUP1 217 aa10.51□□□□□ -0.73
TOP3A-203ENST00000469739 KCNG1Q9UIX4 513 aa10.51□□□□□ -0.73
TOP3A-203ENST00000469739 TNS1Q9HBL0 1735 aaKnown RBP10.51□□□□□ -0.73
TOP3A-203ENST00000469739 KIF2AO00139 706 aaPredicted RBP10.51□□□□□ -0.73
TOP3A-203ENST00000469739 KRT18P05783 430 aaKnown RBP10.51□□□□□ -0.73
TOP3A-203ENST00000469739 ARID5AQ03989 594 aa10.51□□□□□ -0.73
TOP3A-203ENST00000469739 LARP4BQ92615 738 aaKnown RBP10.51□□□□□ -0.73
TOP3A-203ENST00000469739 DDX12PQ92771 950 aa10.51□□□□□ -0.73
TOP3A-203ENST00000469739 ZBTB5O15062 677 aa10.5□□□□□ -0.73
TOP3A-203ENST00000469739 PLEKP08567 350 aaPredicted RBP10.5□□□□□ -0.73
TOP3A-203ENST00000469739 KCTD19Q17RG1 926 aaPredicted RBP10.5□□□□□ -0.73
TOP3A-203ENST00000469739 GALNT17Q6IS24 598 aa10.5□□□□□ -0.73
TOP3A-203ENST00000469739 KRT26Q7Z3Y9 468 aa10.5□□□□□ -0.73
TOP3A-203ENST00000469739 ANKRD13CQ8N6S4 541 aa10.5□□□□□ -0.73
TOP3A-203ENST00000469739 MB21D1Q8N884 522 aa10.5□□□□□ -0.73
TOP3A-203ENST00000469739 DAGLBQ8NCG7 672 aa10.5□□□□□ -0.73
TOP3A-203ENST00000469739 GIMAP8Q8ND71 665 aaPredicted RBP10.5□□□□□ -0.73
TOP3A-203ENST00000469739 ACER1Q8TDN7 264 aa10.5□□□□□ -0.73
TOP3A-203ENST00000469739 SMCR8Q8TEV9 937 aaPredicted RBP10.5□□□□□ -0.73
TOP3A-203ENST00000469739 P2RX5Q93086 422 aa10.5□□□□□ -0.73
TOP3A-203ENST00000469739 AKT1S1Q96B36 256 aa10.5□□□□□ -0.73
TOP3A-203ENST00000469739 PSMB7Q99436 277 aa10.5□□□□□ -0.73
TOP3A-203ENST00000469739 SEMA6BQ9H3T3 888 aa10.5□□□□□ -0.73
TOP3A-203ENST00000469739 HDAC6Q9UBN7 1215 aa10.5□□□□□ -0.73
TOP3A-203ENST00000469739 LUC7L2Q9Y383 392 aaKnown RBP10.5□□□□□ -0.73
TOP3A-203ENST00000469739 DUSP10Q9Y6W6 482 aa10.5□□□□□ -0.73
TOP3A-203ENST00000469739 KLRG2A4D1S0 409 aaPredicted RBP10.5□□□□□ -0.73
TOP3A-203ENST00000469739 POTEFA5A3E0 1075 aa10.5□□□□□ -0.73
TOP3A-203ENST00000469739 SFI1A8K8P3 1242 aa10.5□□□□□ -0.73
TOP3A-203ENST00000469739 KIF5CO60282 957 aa10.5□□□□□ -0.73
TOP3A-203ENST00000469739 POTEIP0CG38 1075 aa10.5□□□□□ -0.73
TOP3A-203ENST00000469739 PBX1P40424 430 aa10.5□□□□□ -0.73
TOP3A-203ENST00000469739 NOP2P46087 812 aaKnown RBP10.5□□□□□ -0.73
TOP3A-203ENST00000469739 MRPL12P52815 198 aaKnown RBP10.5□□□□□ -0.73
TOP3A-203ENST00000469739 MRPS25P82663 173 aaKnown RBP10.5□□□□□ -0.73
TOP3A-203ENST00000469739 PPP2R3AQ06190 1150 aa10.5□□□□□ -0.73
TOP3A-203ENST00000469739 ABCB5Q2M3G0 1257 aa10.5□□□□□ -0.73
TOP3A-203ENST00000469739 DACT2Q5SW24 774 aa10.5□□□□□ -0.73
TOP3A-203ENST00000469739 NCAPH2Q6IBW4 605 aa10.5□□□□□ -0.73
TOP3A-203ENST00000469739 TTI2Q6NXR4 508 aa10.5□□□□□ -0.73
TOP3A-203ENST00000469739 POTEGQ6S5H5 508 aa10.5□□□□□ -0.73
TOP3A-203ENST00000469739 POTEEQ6S8J3 1075 aa10.5□□□□□ -0.73
TOP3A-203ENST00000469739 CNGA4Q8IV77 575 aa10.5□□□□□ -0.73
TOP3A-203ENST00000469739 HAS1Q92839 578 aa10.5□□□□□ -0.73
TOP3A-203ENST00000469739 CCDC47Q96A33 483 aaKnown RBP10.5□□□□□ -0.73
TOP3A-203ENST00000469739 CAPZA3Q96KX2 299 aa10.5□□□□□ -0.73
TOP3A-203ENST00000469739 LIMA1Q9UHB6 759 aaKnown RBP10.5□□□□□ -0.73
TOP3A-203ENST00000469739 A0A1W2PRG0 241 aa10.49□□□□□ -0.73
TOP3A-203ENST00000469739 MACROD2A1Z1Q3 448 aa10.49□□□□□ -0.73
TOP3A-203ENST00000469739 UNCXA6NJT0 531 aa10.49□□□□□ -0.73
TOP3A-203ENST00000469739 H7C1D1 291 aa10.49□□□□□ -0.73
TOP3A-203ENST00000469739 SRGAP2O75044 1071 aa10.49□□□□□ -0.73
TOP3A-203ENST00000469739 RHOBTB3O94955 611 aa10.49□□□□□ -0.73
TOP3A-203ENST00000469739 CFBP00751 764 aa10.49□□□□□ -0.73
TOP3A-203ENST00000469739 RHOXF2BP0C7M4 288 aa10.49□□□□□ -0.73
TOP3A-203ENST00000469739 GTF2A1P52655 376 aaPredicted RBP10.49□□□□□ -0.73
TOP3A-203ENST00000469739 DGKZQ13574 1117 aa10.49□□□□□ -0.73
TOP3A-203ENST00000469739 TSR1Q2NL82 804 aaKnown RBP10.49□□□□□ -0.73
TOP3A-203ENST00000469739 DEFB132Q7Z7B7 95 aa10.49□□□□□ -0.73
TOP3A-203ENST00000469739 SIAH1Q8IUQ4 282 aa10.49□□□□□ -0.73
TOP3A-203ENST00000469739 NEK11Q8NG66 645 aa10.49□□□□□ -0.73
TOP3A-203ENST00000469739 RHOXF2Q9BQY4 288 aa10.49□□□□□ -0.73
TOP3A-203ENST00000469739 PI4KBQ9UBF8 816 aa10.49□□□□□ -0.73
TOP3A-203ENST00000469739 QSER1Q2KHR3 1735 aa10.49□□□□□ -0.73
TOP3A-203ENST00000469739 EPHB6O15197 1021 aa10.49□□□□□ -0.73
TOP3A-203ENST00000469739 CCP110O43303 1012 aa10.49□□□□□ -0.73
TOP3A-203ENST00000469739 NDUFB10O96000 172 aa10.49□□□□□ -0.73
TOP3A-203ENST00000469739 CLCN6P51797 869 aa10.49□□□□□ -0.73
TOP3A-203ENST00000469739 PABPC4Q13310 644 aaKnown RBP eCLIP10.49□□□□□ -0.73
TOP3A-203ENST00000469739 PODNQ7Z5L7 613 aa10.49□□□□□ -0.73
TOP3A-203ENST00000469739 KIFC2Q96AC6 838 aa10.49□□□□□ -0.73
TOP3A-203ENST00000469739 IKZF4Q9H2S9 585 aa10.49□□□□□ -0.73
TOP3A-203ENST00000469739 L2HGDHQ9H9P8 463 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms