RNA–Protein interactions for RNA: ENST00000469534.1

ITGA6-208, Transcript of integrin subunit alpha 6, humanhuman

TSL 2

Gene ITGA6, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-208ENST00000469534 PKN1Q16512 942 aa6.04□□□□□ -1.44
ITGA6-208ENST00000469534 NOM1Q5C9Z4 860 aaKnown RBP6.04□□□□□ -1.44
ITGA6-208ENST00000469534 KRT40Q6A162 431 aa6.04□□□□□ -1.44
ITGA6-208ENST00000469534 HEATR3Q7Z4Q2 680 aa6.04□□□□□ -1.44
ITGA6-208ENST00000469534 LDHDQ86WU2 507 aa6.04□□□□□ -1.44
ITGA6-208ENST00000469534 TRIM22Q8IYM9 498 aa6.04□□□□□ -1.44
ITGA6-208ENST00000469534 ADGRF4Q8IZF3 695 aa6.04□□□□□ -1.44
ITGA6-208ENST00000469534 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.04□□□□□ -1.44
ITGA6-208ENST00000469534 RASGRP4Q8TDF6 673 aa6.04□□□□□ -1.44
ITGA6-208ENST00000469534 COA7Q96BR5 231 aa6.04□□□□□ -1.44
ITGA6-208ENST00000469534 LLPHQ9BRT6 129 aaKnown RBP6.04□□□□□ -1.44
ITGA6-208ENST00000469534 TANGO6Q9C0B7 1094 aa6.04□□□□□ -1.44
ITGA6-208ENST00000469534 VCPKMTQ9H867 229 aa6.04□□□□□ -1.44
ITGA6-208ENST00000469534 GDPD2Q9HCC8 539 aa6.04□□□□□ -1.44
ITGA6-208ENST00000469534 CWC22Q9HCG8 908 aaKnown RBP6.04□□□□□ -1.44
ITGA6-208ENST00000469534 CYLDQ9NQC7 956 aa6.04□□□□□ -1.44
ITGA6-208ENST00000469534 ZNF112Q9UJU3 913 aa6.04□□□□□ -1.44
ITGA6-208ENST00000469534 PCDHB9Q9Y5E1 797 aa6.04□□□□□ -1.44
ITGA6-208ENST00000469534 CSADQ9Y600 493 aa6.04□□□□□ -1.44
ITGA6-208ENST00000469534 NID2Q14112 1375 aa6.04□□□□□ -1.44
ITGA6-208ENST00000469534 CCDC196A0A1B0GTZ2 297 aa6.03□□□□□ -1.44
ITGA6-208ENST00000469534 PRPF3O43395 683 aaKnown RBP6.03□□□□□ -1.44
ITGA6-208ENST00000469534 PPP1R11O60927 126 aaPredicted RBP6.03□□□□□ -1.44
ITGA6-208ENST00000469534 DEXIO95424 95 aa6.03□□□□□ -1.44
ITGA6-208ENST00000469534 BRD1O95696 1058 aa6.03□□□□□ -1.44
ITGA6-208ENST00000469534 F13A1P00488 732 aa6.03□□□□□ -1.44
ITGA6-208ENST00000469534 ATP2B1P20020 1258 aa6.03□□□□□ -1.44
ITGA6-208ENST00000469534 NOVP48745 357 aa6.03□□□□□ -1.44
ITGA6-208ENST00000469534 NLRP5P59047 1200 aa6.03□□□□□ -1.44
ITGA6-208ENST00000469534 MCCD1P59942 119 aaPredicted RBP6.03□□□□□ -1.44
ITGA6-208ENST00000469534 ERVK-9P63128 1117 aa6.03□□□□□ -1.44
ITGA6-208ENST00000469534 HMGN5P82970 282 aaKnown RBP6.03□□□□□ -1.44
ITGA6-208ENST00000469534 RESTQ13127 1097 aa6.03□□□□□ -1.44
ITGA6-208ENST00000469534 NR1H3Q13133 447 aa6.03□□□□□ -1.44
ITGA6-208ENST00000469534 GNL2Q13823 731 aaKnown RBP6.03□□□□□ -1.44
ITGA6-208ENST00000469534 TRIM29Q14134 588 aa6.03□□□□□ -1.44
ITGA6-208ENST00000469534 CDC37Q16543 378 aaPredicted RBP6.03□□□□□ -1.44
ITGA6-208ENST00000469534 USH1GQ495M9 461 aa6.03□□□□□ -1.44
ITGA6-208ENST00000469534 ASPRV1Q53RT3 343 aa6.03□□□□□ -1.44
ITGA6-208ENST00000469534 SYDE2Q5VT97 1194 aa6.03□□□□□ -1.44
ITGA6-208ENST00000469534 WWC2Q6AWC2 1192 aa6.03□□□□□ -1.44
ITGA6-208ENST00000469534 SV2AQ7L0J3 742 aa6.03□□□□□ -1.44
ITGA6-208ENST00000469534 LYSMD3Q7Z3D4 306 aa6.03□□□□□ -1.44
ITGA6-208ENST00000469534 ARMC9Q7Z3E5 817 aa6.03□□□□□ -1.44
ITGA6-208ENST00000469534 ZNF280CQ8ND82 737 aa6.03□□□□□ -1.44
ITGA6-208ENST00000469534 DCAF4Q8WV16 495 aa6.03□□□□□ -1.44
ITGA6-208ENST00000469534 OPTNQ96CV9 577 aa6.03□□□□□ -1.44
ITGA6-208ENST00000469534 HOOK2Q96ED9 719 aa6.03□□□□□ -1.44
ITGA6-208ENST00000469534 WNK4Q96J92 1243 aa6.03□□□□□ -1.44
ITGA6-208ENST00000469534 PGBD1Q96JS3 809 aa6.03□□□□□ -1.44
ITGA6-208ENST00000469534 FTOQ9C0B1 505 aaKnown RBP eCLIP6.03□□□□□ -1.44
ITGA6-208ENST00000469534 RPAP3Q9H6T3 665 aaPredicted RBP6.03□□□□□ -1.44
ITGA6-208ENST00000469534 GBA2Q9HCG7 927 aaPredicted RBP6.03□□□□□ -1.44
ITGA6-208ENST00000469534 TFIP11Q9UBB9 837 aaKnown RBP6.03□□□□□ -1.44
ITGA6-208ENST00000469534 CNPY2Q9Y2B0 182 aa6.03□□□□□ -1.44
ITGA6-208ENST00000469534 TMX2Q9Y320 296 aa6.03□□□□□ -1.44
ITGA6-208ENST00000469534 MYH7BA7E2Y1 1941 aa6.03□□□□□ -1.44
ITGA6-208ENST00000469534 RLFQ13129 1914 aa6.03□□□□□ -1.44
ITGA6-208ENST00000469534 LOC285556D6RIA3 1793 aa6.03□□□□□ -1.44
ITGA6-208ENST00000469534 WDR33Q9C0J8 1336 aaKnown RBP6.02□□□□□ -1.45
ITGA6-208ENST00000469534 STK36Q9NRP7 1315 aa6.02□□□□□ -1.45
ITGA6-208ENST00000469534 CDC14CA4D256 554 aa6.02□□□□□ -1.45
ITGA6-208ENST00000469534 BTBD18B2RXH4 712 aa6.02□□□□□ -1.45
ITGA6-208ENST00000469534 FIBPO43427 364 aa6.02□□□□□ -1.45
ITGA6-208ENST00000469534 FLOT1O75955 427 aa6.02□□□□□ -1.45
ITGA6-208ENST00000469534 SNHG28P0DPA3 235 aa6.02□□□□□ -1.45
ITGA6-208ENST00000469534 SCG2P13521 617 aa6.02□□□□□ -1.45
ITGA6-208ENST00000469534 VCAM1P19320 739 aa6.02□□□□□ -1.45
ITGA6-208ENST00000469534 GPC1P35052 558 aa6.02□□□□□ -1.45
ITGA6-208ENST00000469534 GNAQP50148 359 aa6.02□□□□□ -1.45
ITGA6-208ENST00000469534 NAPAP54920 295 aa6.02□□□□□ -1.45
ITGA6-208ENST00000469534 NUCB2P80303 420 aa6.02□□□□□ -1.45
ITGA6-208ENST00000469534 DNM1Q05193 864 aaKnown RBP6.02□□□□□ -1.45
ITGA6-208ENST00000469534 UBE2SQ16763 222 aa6.02□□□□□ -1.45
ITGA6-208ENST00000469534 QRICH1Q2TAL8 776 aa6.02□□□□□ -1.45
ITGA6-208ENST00000469534 NOL9Q5SY16 702 aaKnown RBP6.02□□□□□ -1.45
ITGA6-208ENST00000469534 TREML2Q5T2D2 321 aa6.02□□□□□ -1.45
ITGA6-208ENST00000469534 CPXCR1Q8N123 301 aa6.02□□□□□ -1.45
ITGA6-208ENST00000469534 GMCL1P1Q8NEA9 526 aa6.02□□□□□ -1.45
ITGA6-208ENST00000469534 MKL1Q969V6 931 aa6.02□□□□□ -1.45
ITGA6-208ENST00000469534 ATG4CQ96DT6 458 aa6.02□□□□□ -1.45
ITGA6-208ENST00000469534 RRP36Q96EU6 259 aaKnown RBP6.02□□□□□ -1.45
ITGA6-208ENST00000469534 UIMC1Q96RL1 719 aa6.02□□□□□ -1.45
ITGA6-208ENST00000469534 RNF26Q9BY78 433 aaPredicted RBP6.02□□□□□ -1.45
ITGA6-208ENST00000469534 JMJD4Q9H9V9 463 aa6.02□□□□□ -1.45
ITGA6-208ENST00000469534 AS3MTQ9HBK9 375 aa6.02□□□□□ -1.45
ITGA6-208ENST00000469534 HOMER2Q9NSB8 354 aa6.02□□□□□ -1.45
ITGA6-208ENST00000469534 TMEM260Q9NX78 707 aa6.02□□□□□ -1.45
ITGA6-208ENST00000469534 TMOD4Q9NZQ9 345 aa6.02□□□□□ -1.45
ITGA6-208ENST00000469534 SEC63Q9UGP8 760 aaKnown RBP6.02□□□□□ -1.45
ITGA6-208ENST00000469534 PRR12Q9ULL5 1215 aa6.02□□□□□ -1.45
ITGA6-208ENST00000469534 AFG3L2Q9Y4W6 797 aa6.02□□□□□ -1.45
ITGA6-208ENST00000469534 DNMT3AQ9Y6K1 912 aaPredicted RBP6.02□□□□□ -1.45
ITGA6-208ENST00000469534 RBBP6Q7Z6E9 1792 aaKnown RBP6.01□□□□□ -1.45
ITGA6-208ENST00000469534 STXBP3O00186 592 aa6.01□□□□□ -1.45
ITGA6-208ENST00000469534 BAG4O95429 457 aaKnown RBP6.01□□□□□ -1.45
ITGA6-208ENST00000469534 PRKCSHP14314 528 aaPredicted RBP6.01□□□□□ -1.45
ITGA6-208ENST00000469534 PDCP20941 246 aa6.01□□□□□ -1.45
ITGA6-208ENST00000469534 YY1P25490 414 aa6.01□□□□□ -1.45
ITGA6-208ENST00000469534 STAT2P52630 851 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms