RNA–Protein interactions for RNA: ENST00000469006.1

SNED1-209, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 963 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-209ENST00000469006 CNKSR3Q6P9H4 555 aa17.01■□□□□ 0.31
SNED1-209ENST00000469006 CHST3Q7LGC8 479 aa17.01■□□□□ 0.31
SNED1-209ENST00000469006 SYTL5Q8TDW5 730 aaPredicted RBP17.01■□□□□ 0.31
SNED1-209ENST00000469006 KAT2BQ92831 832 aa17.01■□□□□ 0.31
SNED1-209ENST00000469006 TAAR1Q96RJ0 339 aa17.01■□□□□ 0.31
SNED1-209ENST00000469006 ZKSCAN3Q9BRR0 538 aa17.01■□□□□ 0.31
SNED1-209ENST00000469006 ZBED2Q9BTP6 218 aa17.01■□□□□ 0.31
SNED1-209ENST00000469006 UBA5Q9GZZ9 404 aa17.01■□□□□ 0.31
SNED1-209ENST00000469006 EPHX3Q9H6B9 360 aa17.01■□□□□ 0.31
SNED1-209ENST00000469006 COL20A1Q9P218 1284 aa17.01■□□□□ 0.31
SNED1-209ENST00000469006 ABCB11O95342 1321 aa17■□□□□ 0.31
SNED1-209ENST00000469006 TBC1D5Q92609 795 aa17■□□□□ 0.31
SNED1-209ENST00000469006 GTF2IRD1Q9UHL9 959 aa17■□□□□ 0.31
SNED1-209ENST00000469006 NBNO60934 754 aa16.99■□□□□ 0.31
SNED1-209ENST00000469006 CXCL10P02778 98 aa16.99■□□□□ 0.31
SNED1-209ENST00000469006 CASTP20810 708 aaKnown RBP16.99■□□□□ 0.31
SNED1-209ENST00000469006 RBL2Q08999 1139 aa16.99■□□□□ 0.31
SNED1-209ENST00000469006 TCTN1Q2MV58 587 aa16.99■□□□□ 0.31
SNED1-209ENST00000469006 C7orf31Q8N865 590 aa16.99■□□□□ 0.31
SNED1-209ENST00000469006 NSUN6Q8TEA1 469 aaKnown RBP16.99■□□□□ 0.31
SNED1-209ENST00000469006 ESR2Q92731 530 aa16.99■□□□□ 0.31
SNED1-209ENST00000469006 RMDN3Q96TC7 470 aa16.99■□□□□ 0.31
SNED1-209ENST00000469006 LRFN3Q9BTN0 628 aa16.99■□□□□ 0.31
SNED1-209ENST00000469006 MAF1Q9H063 256 aa16.99■□□□□ 0.31
SNED1-209ENST00000469006 RWDD1Q9H446 243 aaPredicted RBP16.99■□□□□ 0.31
SNED1-209ENST00000469006 RNF41Q9H4P4 317 aaPredicted RBP16.99■□□□□ 0.31
SNED1-209ENST00000469006 HDAC6Q9UBN7 1215 aa16.99■□□□□ 0.31
SNED1-209ENST00000469006 MTUS1Q9ULD2 1270 aa16.99■□□□□ 0.31
SNED1-209ENST00000469006 LAMA4Q16363 1823 aa16.98■□□□□ 0.31
SNED1-209ENST00000469006 KIAA1217Q5T5P2 1943 aa16.98■□□□□ 0.31
SNED1-209ENST00000469006 GJB5O95377 273 aa16.98■□□□□ 0.31
SNED1-209ENST00000469006 PARNO95453 639 aaKnown RBP16.98■□□□□ 0.31
SNED1-209ENST00000469006 ZNF286BP0CG31 522 aa16.98■□□□□ 0.31
SNED1-209ENST00000469006 CKBP12277 381 aa16.98■□□□□ 0.31
SNED1-209ENST00000469006 PSEN2P49810 448 aa16.98■□□□□ 0.31
SNED1-209ENST00000469006 STXBP2Q15833 593 aa16.98■□□□□ 0.31
SNED1-209ENST00000469006 DGKDQ16760 1214 aa16.98■□□□□ 0.31
SNED1-209ENST00000469006 PNMA1Q8ND90 353 aa16.98■□□□□ 0.31
SNED1-209ENST00000469006 IWS1Q96ST2 819 aa16.98■□□□□ 0.31
SNED1-209ENST00000469006 ALG1Q9BT22 464 aa16.98■□□□□ 0.31
SNED1-209ENST00000469006 LMCD1Q9NZU5 365 aa16.98■□□□□ 0.31
SNED1-209ENST00000469006 HCN4Q9Y3Q4 1203 aa16.98■□□□□ 0.31
SNED1-209ENST00000469006 RBAK-RBAKDNI3L0D1 243 aa16.97■□□□□ 0.31
SNED1-209ENST00000469006 EIF2AK2P19525 551 aaKnown RBP16.97■□□□□ 0.31
SNED1-209ENST00000469006 MFSD10Q14728 455 aa16.97■□□□□ 0.31
SNED1-209ENST00000469006 QRICH1Q2TAL8 776 aa16.97■□□□□ 0.31
SNED1-209ENST00000469006 TMEM31Q5JXX7 168 aa16.97■□□□□ 0.31
SNED1-209ENST00000469006 DGKHQ86XP1 1220 aa16.97■□□□□ 0.31
SNED1-209ENST00000469006 TICAM2Q86XR7 235 aa16.97■□□□□ 0.31
SNED1-209ENST00000469006 MCF2L2Q86YR7 1114 aa16.97■□□□□ 0.31
SNED1-209ENST00000469006 SMC5Q8IY18 1101 aa16.97■□□□□ 0.31
SNED1-209ENST00000469006 ADGRF4Q8IZF3 695 aa16.97■□□□□ 0.31
SNED1-209ENST00000469006 RAD9AQ99638 391 aa16.97■□□□□ 0.31
SNED1-209ENST00000469006 KATNAL1Q9BW62 490 aa16.97■□□□□ 0.31
SNED1-209ENST00000469006 KAT14Q9H8E8 782 aa16.97■□□□□ 0.31
SNED1-209ENST00000469006 ABHD14A-ACY1A0A1B0GW23 586 aa16.96■□□□□ 0.31
SNED1-209ENST00000469006 LINC01553A4QN01 128 aa16.96■□□□□ 0.31
SNED1-209ENST00000469006 TRIM6-TRIM34B2RNG4 842 aa16.96■□□□□ 0.31
SNED1-209ENST00000469006 DHX16O60231 1041 aaKnown RBP16.96■□□□□ 0.31
SNED1-209ENST00000469006 F2P00734 622 aa16.96■□□□□ 0.31
SNED1-209ENST00000469006 ERVK-21P61565 698 aa16.96■□□□□ 0.31
SNED1-209ENST00000469006 KIAA0753Q2KHM9 967 aa16.96■□□□□ 0.31
SNED1-209ENST00000469006 TRIM71Q2Q1W2 868 aaKnown RBP16.96■□□□□ 0.31
SNED1-209ENST00000469006 ASPRV1Q53RT3 343 aa16.96■□□□□ 0.31
SNED1-209ENST00000469006 ARHGEF16Q5VV41 709 aa16.96■□□□□ 0.31
SNED1-209ENST00000469006 FAM117BQ6P1L5 589 aa16.96■□□□□ 0.31
SNED1-209ENST00000469006 KHSRPQ92945 711 aaKnown RBP eCLIP16.96■□□□□ 0.31
SNED1-209ENST00000469006 WNT8BQ93098 351 aa16.96■□□□□ 0.31
SNED1-209ENST00000469006 EMID1Q96A84 441 aaPredicted RBP16.96■□□□□ 0.31
SNED1-209ENST00000469006 TGS1Q96RS0 853 aaKnown RBP16.96■□□□□ 0.31
SNED1-209ENST00000469006 SUGCTQ9HAC7 445 aa16.96■□□□□ 0.31
SNED1-209ENST00000469006 DDX41Q9UJV9 622 aaKnown RBP16.96■□□□□ 0.31
SNED1-209ENST00000469006 MRPL11Q9Y3B7 192 aaKnown RBP16.96■□□□□ 0.31
SNED1-209ENST00000469006 MRVI1Q9Y6F6 885 aa16.96■□□□□ 0.31
SNED1-209ENST00000469006 SIP14410 1827 aa16.96■□□□□ 0.3
SNED1-209ENST00000469006 ZNF213O14771 459 aa16.95■□□□□ 0.3
SNED1-209ENST00000469006 EFCAB14O75071 495 aa16.95■□□□□ 0.3
SNED1-209ENST00000469006 KDM4AO75164 1064 aa16.95■□□□□ 0.3
SNED1-209ENST00000469006 MFAP1P55081 439 aaKnown RBP16.95■□□□□ 0.3
SNED1-209ENST00000469006 PTK7Q13308 1070 aa16.95■□□□□ 0.3
SNED1-209ENST00000469006 IKBKEQ14164 716 aa16.95■□□□□ 0.3
SNED1-209ENST00000469006 MBTPS1Q14703 1052 aa16.95■□□□□ 0.3
SNED1-209ENST00000469006 CCDC178Q5BJE1 867 aa16.95■□□□□ 0.3
SNED1-209ENST00000469006 TRAF7Q6Q0C0 670 aa16.95■□□□□ 0.3
SNED1-209ENST00000469006 IQCA1Q86XH1 822 aa16.95■□□□□ 0.3
SNED1-209ENST00000469006 FBXO11Q86XK2 927 aa16.95■□□□□ 0.3
SNED1-209ENST00000469006 PPTC7Q8NI37 304 aa16.95■□□□□ 0.3
SNED1-209ENST00000469006 UBE2ZQ9H832 354 aaPredicted RBP16.95■□□□□ 0.3
SNED1-209ENST00000469006 PXMP2Q9NR77 195 aa16.95■□□□□ 0.3
SNED1-209ENST00000469006 FAM86C2PA6NEL3 165 aa16.94■□□□□ 0.3
SNED1-209ENST00000469006 HAS3O00219 553 aa16.94■□□□□ 0.3
SNED1-209ENST00000469006 EIF3JO75822 258 aaKnown RBP16.94■□□□□ 0.3
SNED1-209ENST00000469006 HOXD11P31277 338 aaPredicted RBP16.94■□□□□ 0.3
SNED1-209ENST00000469006 LAMC2Q13753 1193 aa16.94■□□□□ 0.3
SNED1-209ENST00000469006 ZNF618Q5T7W0 954 aa16.94■□□□□ 0.3
SNED1-209ENST00000469006 RILPL2Q969X0 211 aa16.94■□□□□ 0.3
SNED1-209ENST00000469006 JMJD4Q9H9V9 463 aa16.94■□□□□ 0.3
SNED1-209ENST00000469006 C11orf16Q9NQ32 467 aa16.94■□□□□ 0.3
SNED1-209ENST00000469006 MYH6P13533 1939 aa16.94■□□□□ 0.3
SNED1-209ENST00000469006 B4E1Z4 1266 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms