RNA–Protein interactions for RNA: ENST00000468836.1

CLRN1-204, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-204ENST00000468836 CHMP4BP1P59074 171 aa14.96□□□□□ -0.01
CLRN1-204ENST00000468836 APOBRQ0VD83 1088 aa14.96□□□□□ -0.01
CLRN1-204ENST00000468836 FAM47CQ5HY64 1035 aa14.96□□□□□ -0.01
CLRN1-204ENST00000468836 SH3RF1Q7Z6J0 888 aa14.96□□□□□ -0.01
CLRN1-204ENST00000468836 DHX37Q8IY37 1157 aaKnown RBP14.96□□□□□ -0.01
CLRN1-204ENST00000468836 BADQ92934 168 aa14.96□□□□□ -0.01
CLRN1-204ENST00000468836 PRO3102Q9H379 93 aa14.96□□□□□ -0.01
CLRN1-204ENST00000468836 PSTPIP2Q9H939 334 aa14.96□□□□□ -0.01
CLRN1-204ENST00000468836 TRIM43BA6NCK2 446 aa14.95□□□□□ -0.02
CLRN1-204ENST00000468836 SPDYE3A6NKU9 549 aa14.95□□□□□ -0.02
CLRN1-204ENST00000468836 ARIH2O95376 493 aa14.95□□□□□ -0.02
CLRN1-204ENST00000468836 FXR1P51114 621 aaKnown RBP eCLIP14.95□□□□□ -0.02
CLRN1-204ENST00000468836 PSMC6P62333 389 aa14.95□□□□□ -0.02
CLRN1-204ENST00000468836 PURAQ00577 322 aaKnown RBP14.95□□□□□ -0.02
CLRN1-204ENST00000468836 AKAP17AQ02040 695 aaKnown RBP14.95□□□□□ -0.02
CLRN1-204ENST00000468836 FAAP100Q0VG06 881 aa14.95□□□□□ -0.02
CLRN1-204ENST00000468836 USP17L6PQ6QN14 398 aa14.95□□□□□ -0.02
CLRN1-204ENST00000468836 GPKOWQ92917 476 aaPredicted RBP eCLIP14.95□□□□□ -0.02
CLRN1-204ENST00000468836 TRIM43Q96BQ3 446 aaPredicted RBP14.95□□□□□ -0.02
CLRN1-204ENST00000468836 CYP46A1Q9Y6A2 500 aa14.95□□□□□ -0.02
CLRN1-204ENST00000468836 CNTNAP5Q8WYK1 1306 aa14.94□□□□□ -0.02
CLRN1-204ENST00000468836 LCTP09848 1927 aa14.94□□□□□ -0.02
CLRN1-204ENST00000468836 hCG_1984214I3L0E3 225 aa14.94□□□□□ -0.02
CLRN1-204ENST00000468836 KIAA0355O15063 1070 aa14.94□□□□□ -0.02
CLRN1-204ENST00000468836 STAM2O75886 525 aa14.94□□□□□ -0.02
CLRN1-204ENST00000468836 CDK7P50613 346 aa14.94□□□□□ -0.02
CLRN1-204ENST00000468836 LAMC2Q13753 1193 aa14.94□□□□□ -0.02
CLRN1-204ENST00000468836 PPP1R18Q6NYC8 613 aa14.94□□□□□ -0.02
CLRN1-204ENST00000468836 CCDC62Q6P9F0 684 aa14.94□□□□□ -0.02
CLRN1-204ENST00000468836 VSIG10LQ86VR7 867 aa14.94□□□□□ -0.02
CLRN1-204ENST00000468836 FAM126BQ8IXS8 530 aa14.94□□□□□ -0.02
CLRN1-204ENST00000468836 ZNF713Q8N859 430 aaPredicted RBP14.94□□□□□ -0.02
CLRN1-204ENST00000468836 AFG1LQ8WV93 481 aa14.94□□□□□ -0.02
CLRN1-204ENST00000468836 MLXIPQ9HAP2 919 aa14.94□□□□□ -0.02
CLRN1-204ENST00000468836 NOD1Q9Y239 953 aa14.94□□□□□ -0.02
CLRN1-204ENST00000468836 MCM3APO60318 1980 aa14.94□□□□□ -0.02
CLRN1-204ENST00000468836 A6NJR5 290 aa14.93□□□□□ -0.02
CLRN1-204ENST00000468836 PIK3CDO00329 1044 aa14.93□□□□□ -0.02
CLRN1-204ENST00000468836 MMP3P08254 477 aa14.93□□□□□ -0.02
CLRN1-204ENST00000468836 SUPT20HL2P0C7V6 817 aa14.93□□□□□ -0.02
CLRN1-204ENST00000468836 FPGSQ05932 587 aa14.93□□□□□ -0.02
CLRN1-204ENST00000468836 DGKDQ16760 1214 aa14.93□□□□□ -0.02
CLRN1-204ENST00000468836 RUFY3Q7L099 469 aa14.93□□□□□ -0.02
CLRN1-204ENST00000468836 NLRX1Q86UT6 975 aa14.93□□□□□ -0.02
CLRN1-204ENST00000468836 IL31RAQ8NI17 732 aa14.93□□□□□ -0.02
CLRN1-204ENST00000468836 ZFP91Q96JP5 570 aaPredicted RBP14.93□□□□□ -0.02
CLRN1-204ENST00000468836 USP26Q9BXU7 913 aa14.93□□□□□ -0.02
CLRN1-204ENST00000468836 PPP1R12CQ9BZL4 782 aa14.93□□□□□ -0.02
CLRN1-204ENST00000468836 RTEL1Q9NZ71 1219 aa14.93□□□□□ -0.02
CLRN1-204ENST00000468836 DDX41Q9UJV9 622 aaKnown RBP14.93□□□□□ -0.02
CLRN1-204ENST00000468836 V9GY48 417 aaPredicted RBP14.93□□□□□ -0.02
CLRN1-204ENST00000468836 NOP56O00567 594 aaKnown RBP14.92□□□□□ -0.02
CLRN1-204ENST00000468836 MEIS2O14770 477 aa14.92□□□□□ -0.02
CLRN1-204ENST00000468836 FIBPO43427 364 aa14.92□□□□□ -0.02
CLRN1-204ENST00000468836 SORBS3O60504 671 aa14.92□□□□□ -0.02
CLRN1-204ENST00000468836 GGPS1O95749 300 aa14.92□□□□□ -0.02
CLRN1-204ENST00000468836 TIMP1P01033 207 aa14.92□□□□□ -0.02
CLRN1-204ENST00000468836 TGFB3P10600 412 aa14.92□□□□□ -0.02
CLRN1-204ENST00000468836 ADCY7P51828 1080 aa14.92□□□□□ -0.02
CLRN1-204ENST00000468836 ARHGAP1Q07960 439 aa14.92□□□□□ -0.02
CLRN1-204ENST00000468836 UBE2SQ16763 222 aa14.92□□□□□ -0.02
CLRN1-204ENST00000468836 WWC2Q6AWC2 1192 aa14.92□□□□□ -0.02
CLRN1-204ENST00000468836 XRRA1Q6P2D8 792 aa14.92□□□□□ -0.02
CLRN1-204ENST00000468836 TMEM199Q8N511 208 aa14.92□□□□□ -0.02
CLRN1-204ENST00000468836 SLC43A3Q8NBI5 491 aa14.92□□□□□ -0.02
CLRN1-204ENST00000468836 CCDC12Q8WUD4 166 aaPredicted RBP14.92□□□□□ -0.02
CLRN1-204ENST00000468836 SPATA33Q96N06 139 aa14.92□□□□□ -0.02
CLRN1-204ENST00000468836 KATNAL1Q9BW62 490 aa14.92□□□□□ -0.02
CLRN1-204ENST00000468836 GLT8D2Q9H1C3 349 aa14.92□□□□□ -0.02
CLRN1-204ENST00000468836 HIPK3Q9H422 1215 aa14.92□□□□□ -0.02
CLRN1-204ENST00000468836 SMCHD1A6NHR9 2005 aa14.92□□□□□ -0.02
CLRN1-204ENST00000468836 FRMPD4Q14CM0 1322 aa14.92□□□□□ -0.02
CLRN1-204ENST00000468836 UBA1P22314 1058 aaKnown RBP14.91□□□□□ -0.02
CLRN1-204ENST00000468836 CDC27P30260 824 aa14.91□□□□□ -0.02
CLRN1-204ENST00000468836 ADD1P35611 737 aaKnown RBP14.91□□□□□ -0.02
CLRN1-204ENST00000468836 NEDD9Q14511 834 aa14.91□□□□□ -0.02
CLRN1-204ENST00000468836 PCNX4Q63HM2 1172 aa14.91□□□□□ -0.02
CLRN1-204ENST00000468836 PPTC7Q8NI37 304 aa14.91□□□□□ -0.02
CLRN1-204ENST00000468836 UPF3BQ9BZI7 483 aaKnown RBP14.91□□□□□ -0.02
CLRN1-204ENST00000468836 ALDH8A1Q9H2A2 487 aaPredicted RBP14.91□□□□□ -0.02
CLRN1-204ENST00000468836 ZSWIM6Q9HCJ5 1215 aa14.91□□□□□ -0.02
CLRN1-204ENST00000468836 TBX21Q9UL17 535 aa14.91□□□□□ -0.02
CLRN1-204ENST00000468836 MYH6P13533 1939 aa14.9□□□□□ -0.02
CLRN1-204ENST00000468836 CPLX1O14810 134 aa14.9□□□□□ -0.02
CLRN1-204ENST00000468836 B4GALT4O60513 344 aa14.9□□□□□ -0.02
CLRN1-204ENST00000468836 PPIGQ13427 754 aaKnown RBP eCLIP14.9□□□□□ -0.02
CLRN1-204ENST00000468836 NBPF20Q3BBV1 942 aa14.9□□□□□ -0.02
CLRN1-204ENST00000468836 LRIT3Q3SXY7 679 aa14.9□□□□□ -0.02
CLRN1-204ENST00000468836 CELF3Q5SZQ8 465 aaKnown RBP14.9□□□□□ -0.02
CLRN1-204ENST00000468836 MFSD5Q6N075 450 aa14.9□□□□□ -0.02
CLRN1-204ENST00000468836 NFRKBQ6P4R8 1299 aa14.9□□□□□ -0.02
CLRN1-204ENST00000468836 CPLX2Q6PUV4 134 aaKnown RBP14.9□□□□□ -0.02
CLRN1-204ENST00000468836 FBXL16Q8N461 479 aa14.9□□□□□ -0.02
CLRN1-204ENST00000468836 EMID1Q96A84 441 aaPredicted RBP14.9□□□□□ -0.02
CLRN1-204ENST00000468836 CDHR1Q96JP9 859 aa14.9□□□□□ -0.02
CLRN1-204ENST00000468836 RNPC3Q96LT9 517 aaKnown RBP14.9□□□□□ -0.02
CLRN1-204ENST00000468836 INPP4AQ96PE3 977 aaPredicted RBP14.9□□□□□ -0.02
CLRN1-204ENST00000468836 TM6SF1Q9BZW5 370 aa14.9□□□□□ -0.02
CLRN1-204ENST00000468836 TRPV6Q9H1D0 765 aa14.9□□□□□ -0.02
CLRN1-204ENST00000468836 PDRG1Q9NUG6 133 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms