RNA–Protein interactions for RNA: ENST00000468723.1

GPNMB-207, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 808 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-207ENST00000468723 RB1CC1Q8TDY2 1594 aa5.99□□□□□ -1.45
GPNMB-207ENST00000468723 SGSM2O43147 1006 aa5.99□□□□□ -1.45
GPNMB-207ENST00000468723 DIAPH1O60610 1272 aaKnown RBP5.99□□□□□ -1.45
GPNMB-207ENST00000468723 MSCO60682 206 aa5.99□□□□□ -1.45
GPNMB-207ENST00000468723 NCAM1P13591 858 aa5.99□□□□□ -1.45
GPNMB-207ENST00000468723 FBLN1P23142 703 aa5.99□□□□□ -1.45
GPNMB-207ENST00000468723 AFF3P51826 1226 aaKnown RBP5.99□□□□□ -1.45
GPNMB-207ENST00000468723 SSRP1Q08945 709 aaKnown RBP5.99□□□□□ -1.45
GPNMB-207ENST00000468723 RBL2Q08999 1139 aa5.99□□□□□ -1.45
GPNMB-207ENST00000468723 RASGRF1Q13972 1273 aa5.99□□□□□ -1.45
GPNMB-207ENST00000468723 NBPF6Q5VWK0 638 aa5.99□□□□□ -1.45
GPNMB-207ENST00000468723 KCNT2Q6UVM3 1135 aa5.99□□□□□ -1.45
GPNMB-207ENST00000468723 OSBP2Q969R2 916 aa5.99□□□□□ -1.45
GPNMB-207ENST00000468723 DACT3Q96B18 629 aaPredicted RBP5.99□□□□□ -1.45
GPNMB-207ENST00000468723 TSPAN17Q96FV3 270 aa5.99□□□□□ -1.45
GPNMB-207ENST00000468723 NBPF4Q96M43 638 aa5.99□□□□□ -1.45
GPNMB-207ENST00000468723 PWWP2AQ96N64 755 aa5.99□□□□□ -1.45
GPNMB-207ENST00000468723 PHF20Q9BVI0 1012 aa5.99□□□□□ -1.45
GPNMB-207ENST00000468723 CCDC113Q9H0I3 377 aa5.99□□□□□ -1.45
GPNMB-207ENST00000468723 FAN1Q9Y2M0 1017 aa5.99□□□□□ -1.45
GPNMB-207ENST00000468723 FAM221BA6H8Z2 402 aa5.98□□□□□ -1.45
GPNMB-207ENST00000468723 ZBTB7AO95365 584 aa5.98□□□□□ -1.45
GPNMB-207ENST00000468723 FGFR1P11362 822 aa5.98□□□□□ -1.45
GPNMB-207ENST00000468723 IGFBP6P24592 240 aaPredicted RBP5.98□□□□□ -1.45
GPNMB-207ENST00000468723 GTF2A2P52657 109 aa5.98□□□□□ -1.45
GPNMB-207ENST00000468723 FOXO4P98177 505 aa5.98□□□□□ -1.45
GPNMB-207ENST00000468723 IFRD2Q12894 506 aaPredicted RBP5.98□□□□□ -1.45
GPNMB-207ENST00000468723 SLC9A5Q14940 896 aa5.98□□□□□ -1.45
GPNMB-207ENST00000468723 SF3A1Q15459 793 aaKnown RBP5.98□□□□□ -1.45
GPNMB-207ENST00000468723 TESK1Q15569 626 aa5.98□□□□□ -1.45
GPNMB-207ENST00000468723 NTRK3Q16288 839 aa5.98□□□□□ -1.45
GPNMB-207ENST00000468723 TCERG1LQ5VWI1 586 aa5.98□□□□□ -1.45
GPNMB-207ENST00000468723 MILR1Q7Z6M3 343 aa5.98□□□□□ -1.45
GPNMB-207ENST00000468723 DCP2Q8IU60 420 aaKnown RBP5.98□□□□□ -1.45
GPNMB-207ENST00000468723 ARMC5Q96C12 935 aa5.98□□□□□ -1.45
GPNMB-207ENST00000468723 DNAJC2Q99543 621 aaKnown RBP5.98□□□□□ -1.45
GPNMB-207ENST00000468723 AP5M1Q9H0R1 490 aa5.98□□□□□ -1.45
GPNMB-207ENST00000468723 PPARGC1AQ9UBK2 798 aaKnown RBP5.98□□□□□ -1.45
GPNMB-207ENST00000468723 COA3Q9Y2R0 106 aaPredicted RBP5.98□□□□□ -1.45
GPNMB-207ENST00000468723 NPFFR2Q9Y5X5 522 aa5.98□□□□□ -1.45
GPNMB-207ENST00000468723 X6R8D5 127 aa5.98□□□□□ -1.45
GPNMB-207ENST00000468723 ARID1BQ8NFD5 2236 aaPredicted RBP5.97□□□□□ -1.45
GPNMB-207ENST00000468723 BMP7P18075 431 aa5.97□□□□□ -1.45
GPNMB-207ENST00000468723 SERINC3Q13530 473 aa5.97□□□□□ -1.45
GPNMB-207ENST00000468723 KRTAP19-4Q3LI73 84 aa5.97□□□□□ -1.45
GPNMB-207ENST00000468723 MROH9Q5TGP6 573 aa5.97□□□□□ -1.45
GPNMB-207ENST00000468723 AMIGO3Q86WK7 504 aa5.97□□□□□ -1.45
GPNMB-207ENST00000468723 SIAH1Q8IUQ4 282 aa5.97□□□□□ -1.45
GPNMB-207ENST00000468723 TMEM151BQ8IW70 566 aa5.97□□□□□ -1.45
GPNMB-207ENST00000468723 DEPDC7Q96QD5 511 aa5.97□□□□□ -1.45
GPNMB-207ENST00000468723 SYT3Q9BQG1 590 aa5.97□□□□□ -1.45
GPNMB-207ENST00000468723 JAM3Q9BX67 310 aa5.97□□□□□ -1.45
GPNMB-207ENST00000468723 GPR27Q9NS67 375 aa5.97□□□□□ -1.45
GPNMB-207ENST00000468723 PALD1Q9ULE6 856 aa5.97□□□□□ -1.45
GPNMB-207ENST00000468723 KDM2BQ8NHM5 1336 aa5.97□□□□□ -1.45
GPNMB-207ENST00000468723 UNC13AQ9UPW8 1703 aa5.96□□□□□ -1.45
GPNMB-207ENST00000468723 ADAMTS20P59510 1910 aa5.96□□□□□ -1.46
GPNMB-207ENST00000468723 H7BY64 318 aa5.96□□□□□ -1.46
GPNMB-207ENST00000468723 PLA2G1BP04054 148 aaKnown RBP5.96□□□□□ -1.46
GPNMB-207ENST00000468723 FAM153BP0C7A2 387 aa5.96□□□□□ -1.46
GPNMB-207ENST00000468723 RASA3Q14644 834 aa5.96□□□□□ -1.46
GPNMB-207ENST00000468723 FAM209AQ5JX71 171 aa5.96□□□□□ -1.46
GPNMB-207ENST00000468723 FOXB2Q5VYV0 432 aa5.96□□□□□ -1.46
GPNMB-207ENST00000468723 RIOX2Q8IUF8 465 aa5.96□□□□□ -1.46
GPNMB-207ENST00000468723 Q8N1Y9 231 aa5.96□□□□□ -1.46
GPNMB-207ENST00000468723 SMARCC2Q8TAQ2 1214 aa5.96□□□□□ -1.46
GPNMB-207ENST00000468723 DCAF4Q8WV16 495 aa5.96□□□□□ -1.46
GPNMB-207ENST00000468723 SEC14L1Q92503 715 aa5.96□□□□□ -1.46
GPNMB-207ENST00000468723 ZNF669Q96BR6 464 aaPredicted RBP5.96□□□□□ -1.46
GPNMB-207ENST00000468723 DRC1Q96MC2 740 aa5.96□□□□□ -1.46
GPNMB-207ENST00000468723 SRPK1Q96SB4 655 aaKnown RBP5.96□□□□□ -1.46
GPNMB-207ENST00000468723 CDC6Q99741 560 aa5.96□□□□□ -1.46
GPNMB-207ENST00000468723 RNF38Q9H0F5 515 aa5.96□□□□□ -1.46
GPNMB-207ENST00000468723 SNTG2Q9NY99 539 aa5.96□□□□□ -1.46
GPNMB-207ENST00000468723 ADCY3O60266 1144 aa5.95□□□□□ -1.46
GPNMB-207ENST00000468723 FBLN7Q53RD9 439 aa5.95□□□□□ -1.46
GPNMB-207ENST00000468723 ADGRG2Q8IZP9 1017 aa5.95□□□□□ -1.46
GPNMB-207ENST00000468723 FAM26EQ8N5C1 309 aa5.95□□□□□ -1.46
GPNMB-207ENST00000468723 ZBTB38Q8NAP3 1195 aaPredicted RBP5.95□□□□□ -1.46
GPNMB-207ENST00000468723 SREK1Q8WXA9 508 aaKnown RBP5.95□□□□□ -1.46
GPNMB-207ENST00000468723 DDX11Q96FC9 970 aa5.95□□□□□ -1.46
GPNMB-207ENST00000468723 NOX5Q96PH1 765 aa5.95□□□□□ -1.46
GPNMB-207ENST00000468723 DNAJC7Q99615 494 aa5.95□□□□□ -1.46
GPNMB-207ENST00000468723 TRAF6Q9Y4K3 522 aa5.95□□□□□ -1.46
GPNMB-207ENST00000468723 PMF1-BGLAPU3KQ54 211 aa5.95□□□□□ -1.46
GPNMB-207ENST00000468723 ASXL2Q76L83 1435 aa5.94□□□□□ -1.46
GPNMB-207ENST00000468723 SLC6A11P48066 632 aa5.94□□□□□ -1.46
GPNMB-207ENST00000468723 RBM10P98175 930 aaKnown RBP5.94□□□□□ -1.46
GPNMB-207ENST00000468723 CACNB2Q08289 660 aaPredicted RBP5.94□□□□□ -1.46
GPNMB-207ENST00000468723 STEAP3Q658P3 488 aa5.94□□□□□ -1.46
GPNMB-207ENST00000468723 CD300LDQ6UXZ3 194 aa5.94□□□□□ -1.46
GPNMB-207ENST00000468723 B3GNT8Q7Z7M8 397 aa5.94□□□□□ -1.46
GPNMB-207ENST00000468723 STK32CQ86UX6 486 aa5.94□□□□□ -1.46
GPNMB-207ENST00000468723 NLGN1Q8N2Q7 840 aa5.94□□□□□ -1.46
GPNMB-207ENST00000468723 FNIP1Q8TF40 1166 aa5.94□□□□□ -1.46
GPNMB-207ENST00000468723 IPO9Q96P70 1041 aaKnown RBP5.94□□□□□ -1.46
GPNMB-207ENST00000468723 KCNJ15Q99712 375 aa5.94□□□□□ -1.46
GPNMB-207ENST00000468723 CDIP1Q9H305 208 aa5.94□□□□□ -1.46
GPNMB-207ENST00000468723 EPB41L1Q9H4G0 881 aa5.94□□□□□ -1.46
GPNMB-207ENST00000468723 TRBV23-1A0A0A0MS06 115 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms