RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 CHST14Q8NCH0 376 aa4.78□□□□□ -1.64
HMGB1P25-201ENST00000468402 PCDH19Q8TAB3 1148 aa4.78□□□□□ -1.64
HMGB1P25-201ENST00000468402 FBXW5Q969U6 566 aa4.78□□□□□ -1.64
HMGB1P25-201ENST00000468402 KCNJ15Q99712 375 aa4.78□□□□□ -1.64
HMGB1P25-201ENST00000468402 MENTQ9BUN1 341 aa4.78□□□□□ -1.64
HMGB1P25-201ENST00000468402 RHOBTB2Q9BYZ6 727 aa4.78□□□□□ -1.64
HMGB1P25-201ENST00000468402 VTA1Q9NP79 307 aa4.78□□□□□ -1.64
HMGB1P25-201ENST00000468402 B4GALT6Q9UBX8 382 aa4.78□□□□□ -1.64
HMGB1P25-201ENST00000468402 ANKRD6Q9Y2G4 727 aa4.78□□□□□ -1.64
HMGB1P25-201ENST00000468402 NPHP3-ACAD11A0A0J9YXS1 232 aa4.77□□□□□ -1.65
HMGB1P25-201ENST00000468402 FAM155AB1AL88 458 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P25-201ENST00000468402 FAM47E-STBD1D6RA91 191 aa4.77□□□□□ -1.65
HMGB1P25-201ENST00000468402 ARVCFO00192 962 aa4.77□□□□□ -1.65
HMGB1P25-201ENST00000468402 TRAF5O00463 557 aa4.77□□□□□ -1.65
HMGB1P25-201ENST00000468402 LEFTY1O75610 366 aa4.77□□□□□ -1.65
HMGB1P25-201ENST00000468402 RFPL1O75677 317 aa4.77□□□□□ -1.65
HMGB1P25-201ENST00000468402 ABLIM3O94929 683 aa4.77□□□□□ -1.65
HMGB1P25-201ENST00000468402 EOMESO95936 686 aa4.77□□□□□ -1.65
HMGB1P25-201ENST00000468402 CFBP00751 764 aa4.77□□□□□ -1.65
HMGB1P25-201ENST00000468402 SOD2P04179 222 aa4.77□□□□□ -1.65
HMGB1P25-201ENST00000468402 IFIT2P09913 472 aaKnown RBP4.77□□□□□ -1.65
HMGB1P25-201ENST00000468402 FAM87AP0C7U9 286 aa4.77□□□□□ -1.65
HMGB1P25-201ENST00000468402 LCP1P13796 627 aa4.77□□□□□ -1.65
HMGB1P25-201ENST00000468402 ATP2A2P16615 1042 aaKnown RBP4.77□□□□□ -1.65
HMGB1P25-201ENST00000468402 PAMP19021 973 aa4.77□□□□□ -1.65
HMGB1P25-201ENST00000468402 MAP4P27816 1152 aaKnown RBP4.77□□□□□ -1.65
HMGB1P25-201ENST00000468402 SCAND1P57086 179 aa4.77□□□□□ -1.65
HMGB1P25-201ENST00000468402 SESN3P58005 492 aa4.77□□□□□ -1.65
HMGB1P25-201ENST00000468402 CYP4F3Q08477 520 aa4.77□□□□□ -1.65
HMGB1P25-201ENST00000468402 KLF1Q13351 362 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P25-201ENST00000468402 ACAP2Q15057 778 aa4.77□□□□□ -1.65
HMGB1P25-201ENST00000468402 PCBP2Q15366 365 aaKnown RBP eCLIP4.77□□□□□ -1.65
HMGB1P25-201ENST00000468402 CRY1Q16526 586 aa4.77□□□□□ -1.65
HMGB1P25-201ENST00000468402 KIZQ2M2Z5 673 aa4.77□□□□□ -1.65
HMGB1P25-201ENST00000468402 MINDY4Q4G0A6 757 aa4.77□□□□□ -1.65
HMGB1P25-201ENST00000468402 ARHGAP29Q52LW3 1261 aa4.77□□□□□ -1.65
HMGB1P25-201ENST00000468402 ACBD5Q5T8D3 534 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P25-201ENST00000468402 E4F1Q66K89 784 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P25-201ENST00000468402 CXorf57Q6NSI4 855 aaKnown RBP4.77□□□□□ -1.65
HMGB1P25-201ENST00000468402 PAOXQ6QHF9 649 aa4.77□□□□□ -1.65
HMGB1P25-201ENST00000468402 ARHGAP27Q6ZUM4 889 aa4.77□□□□□ -1.65
HMGB1P25-201ENST00000468402 DGKHQ86XP1 1220 aa4.77□□□□□ -1.65
HMGB1P25-201ENST00000468402 AMOTL1Q8IY63 956 aa4.77□□□□□ -1.65
HMGB1P25-201ENST00000468402 SAMD3Q8N6K7 520 aa4.77□□□□□ -1.65
HMGB1P25-201ENST00000468402 NPLOC4Q8TAT6 608 aa4.77□□□□□ -1.65
HMGB1P25-201ENST00000468402 COPS5Q92905 334 aa4.77□□□□□ -1.65
HMGB1P25-201ENST00000468402 SLC5A5Q92911 643 aa4.77□□□□□ -1.65
HMGB1P25-201ENST00000468402 CLIP3Q96DZ5 547 aa4.77□□□□□ -1.65
HMGB1P25-201ENST00000468402 COX4I2Q96KJ9 171 aa4.77□□□□□ -1.65
HMGB1P25-201ENST00000468402 FCRL3Q96P31 734 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P25-201ENST00000468402 CAMKK2Q96RR4 588 aa4.77□□□□□ -1.65
HMGB1P25-201ENST00000468402 ORAI3Q9BRQ5 295 aa4.77□□□□□ -1.65
HMGB1P25-201ENST00000468402 CELF4Q9BZC1 486 aaKnown RBP4.77□□□□□ -1.65
HMGB1P25-201ENST00000468402 IPPKQ9H8X2 491 aa4.77□□□□□ -1.65
HMGB1P25-201ENST00000468402 C14orf119Q9NWQ9 140 aa4.77□□□□□ -1.65
HMGB1P25-201ENST00000468402 OBP2AQ9NY56 170 aa4.77□□□□□ -1.65
HMGB1P25-201ENST00000468402 CNTNAP4Q9C0A0 1308 aa4.76□□□□□ -1.65
HMGB1P25-201ENST00000468402 GOLGA8AA7E2F4 631 aa4.76□□□□□ -1.65
HMGB1P25-201ENST00000468402 GOLGA8BA8MQT2 603 aa4.76□□□□□ -1.65
HMGB1P25-201ENST00000468402 GNAT3A8MTJ3 354 aa4.76□□□□□ -1.65
HMGB1P25-201ENST00000468402 IL33O95760 270 aa4.76□□□□□ -1.65
HMGB1P25-201ENST00000468402 CKMP06732 381 aa4.76□□□□□ -1.65
HMGB1P25-201ENST00000468402 H2AFB1P0C5Y9 115 aa4.76□□□□□ -1.65
HMGB1P25-201ENST00000468402 H2AFB2P0C5Z0 115 aa4.76□□□□□ -1.65
HMGB1P25-201ENST00000468402 KRT15P19012 456 aa4.76□□□□□ -1.65
HMGB1P25-201ENST00000468402 CTSKP43235 329 aa4.76□□□□□ -1.65
HMGB1P25-201ENST00000468402 KIR3DL1P43629 444 aa4.76□□□□□ -1.65
HMGB1P25-201ENST00000468402 RECQLP46063 649 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P25-201ENST00000468402 IREB2P48200 963 aaKnown RBP4.76□□□□□ -1.65
HMGB1P25-201ENST00000468402 LAPTM5Q13571 262 aa4.76□□□□□ -1.65
HMGB1P25-201ENST00000468402 ZNF174Q15697 407 aa4.76□□□□□ -1.65
HMGB1P25-201ENST00000468402 ARHGAP44Q17R89 818 aa4.76□□□□□ -1.65
HMGB1P25-201ENST00000468402 BROXQ5VW32 411 aa4.76□□□□□ -1.65
HMGB1P25-201ENST00000468402 EEF1DP3Q658K8 133 aa4.76□□□□□ -1.65
HMGB1P25-201ENST00000468402 CCDC103Q8IW40 242 aa4.76□□□□□ -1.65
HMGB1P25-201ENST00000468402 ZNF655Q8N720 491 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P25-201ENST00000468402 NAT16Q8N8M0 369 aa4.76□□□□□ -1.65
HMGB1P25-201ENST00000468402 DAGLBQ8NCG7 672 aa4.76□□□□□ -1.65
HMGB1P25-201ENST00000468402 RCBTB1Q8NDN9 531 aa4.76□□□□□ -1.65
HMGB1P25-201ENST00000468402 ENOX1Q8TC92 643 aaKnown RBP4.76□□□□□ -1.65
HMGB1P25-201ENST00000468402 PANK1Q8TE04 598 aa4.76□□□□□ -1.65
HMGB1P25-201ENST00000468402 UTP4Q969X6 686 aaKnown RBP4.76□□□□□ -1.65
HMGB1P25-201ENST00000468402 TCTN2Q96GX1 697 aa4.76□□□□□ -1.65
HMGB1P25-201ENST00000468402 FAXDC2Q96IV6 333 aa4.76□□□□□ -1.65
HMGB1P25-201ENST00000468402 Q96M66 194 aa4.76□□□□□ -1.65
HMGB1P25-201ENST00000468402 KRTAP4-12Q9BQ66 201 aa4.76□□□□□ -1.65
HMGB1P25-201ENST00000468402 DUSP23Q9BVJ7 150 aa4.76□□□□□ -1.65
HMGB1P25-201ENST00000468402 CDADC1Q9BWV3 514 aa4.76□□□□□ -1.65
HMGB1P25-201ENST00000468402 PRDM11Q9NQV5 511 aa4.76□□□□□ -1.65
HMGB1P25-201ENST00000468402 GPATCH2Q9NW75 528 aa4.76□□□□□ -1.65
HMGB1P25-201ENST00000468402 OXSMQ9NWU1 459 aa4.76□□□□□ -1.65
HMGB1P25-201ENST00000468402 BTG4Q9NY30 223 aa4.76□□□□□ -1.65
HMGB1P25-201ENST00000468402 H2AFY2Q9P0M6 372 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P25-201ENST00000468402 GTF2IRD1Q9UHL9 959 aa4.76□□□□□ -1.65
HMGB1P25-201ENST00000468402 GIT1Q9Y2X7 761 aa4.76□□□□□ -1.65
HMGB1P25-201ENST00000468402 NOC2LQ9Y3T9 749 aaKnown RBP4.76□□□□□ -1.65
HMGB1P25-201ENST00000468402 TRBV23OR9-2A0A075B6M9 112 aa4.75□□□□□ -1.65
HMGB1P25-201ENST00000468402 SHISA3A0PJX4 238 aa4.75□□□□□ -1.65
HMGB1P25-201ENST00000468402 H7C1D1 291 aa4.75□□□□□ -1.65
HMGB1P25-201ENST00000468402 FKTNO75072 461 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms