RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 CALM3P0DP25 149 aa12.93□□□□□ -0.34
COL4A6-205ENST00000468338 CALML3P27482 149 aa12.93□□□□□ -0.34
COL4A6-205ENST00000468338 KIF5BP33176 963 aa12.93□□□□□ -0.34
COL4A6-205ENST00000468338 ADCYAP1R1P41586 468 aa12.93□□□□□ -0.34
COL4A6-205ENST00000468338 GNAQP50148 359 aa12.93□□□□□ -0.34
COL4A6-205ENST00000468338 HSD17B4P51659 736 aa12.93□□□□□ -0.34
COL4A6-205ENST00000468338 TRAF1Q13077 416 aa12.93□□□□□ -0.34
COL4A6-205ENST00000468338 SLC39A5Q6ZMH5 540 aa12.93□□□□□ -0.34
COL4A6-205ENST00000468338 FBXL16Q8N461 479 aa12.93□□□□□ -0.34
COL4A6-205ENST00000468338 CTCFLQ8NI51 663 aaPredicted RBP12.93□□□□□ -0.34
COL4A6-205ENST00000468338 NUP133Q8WUM0 1156 aa12.93□□□□□ -0.34
COL4A6-205ENST00000468338 LZTS2Q9BRK4 669 aa12.93□□□□□ -0.34
COL4A6-205ENST00000468338 LRRC2Q9BYS8 371 aa12.93□□□□□ -0.34
COL4A6-205ENST00000468338 ADAM33Q9BZ11 813 aa12.93□□□□□ -0.34
COL4A6-205ENST00000468338 PDGFCQ9NRA1 345 aa12.93□□□□□ -0.34
COL4A6-205ENST00000468338 PCDHA1Q9Y5I3 950 aa12.93□□□□□ -0.34
COL4A6-205ENST00000468338 MYADML2A6NDP7 307 aa12.92□□□□□ -0.34
COL4A6-205ENST00000468338 MOXD2PA6NHM9 499 aa12.92□□□□□ -0.34
COL4A6-205ENST00000468338 CCDC69A6NI79 296 aa12.92□□□□□ -0.34
COL4A6-205ENST00000468338 HMGB1P09429 215 aaKnown RBP12.92□□□□□ -0.34
COL4A6-205ENST00000468338 SMPD1P17405 629 aa12.92□□□□□ -0.34
COL4A6-205ENST00000468338 TNFAIP2Q03169 654 aa12.92□□□□□ -0.34
COL4A6-205ENST00000468338 APOA5Q6Q788 366 aa12.92□□□□□ -0.34
COL4A6-205ENST00000468338 FBXO16Q8IX29 292 aaPredicted RBP12.92□□□□□ -0.34
COL4A6-205ENST00000468338 C7orf61Q8IZ16 206 aa12.92□□□□□ -0.34
COL4A6-205ENST00000468338 SRBD1Q8N5C6 995 aaKnown RBP12.92□□□□□ -0.34
COL4A6-205ENST00000468338 FANCBQ8NB91 859 aa12.92□□□□□ -0.34
COL4A6-205ENST00000468338 TAAR1Q96RJ0 339 aa12.92□□□□□ -0.34
COL4A6-205ENST00000468338 SNX14Q9Y5W7 946 aa12.92□□□□□ -0.34
COL4A6-205ENST00000468338 SLC12A7Q9Y666 1083 aa12.92□□□□□ -0.34
COL4A6-205ENST00000468338 B4DLN1 442 aa12.91□□□□□ -0.34
COL4A6-205ENST00000468338 NUDT7P0C024 238 aa12.91□□□□□ -0.34
COL4A6-205ENST00000468338 MRPL12P52815 198 aaKnown RBP12.91□□□□□ -0.34
COL4A6-205ENST00000468338 ACLYP53396 1101 aa12.91□□□□□ -0.34
COL4A6-205ENST00000468338 RCAN1P53805 252 aa12.91□□□□□ -0.34
COL4A6-205ENST00000468338 KCNA10Q16322 511 aa12.91□□□□□ -0.34
COL4A6-205ENST00000468338 DUSP28Q4G0W2 176 aa12.91□□□□□ -0.34
COL4A6-205ENST00000468338 TMEM63BQ5T3F8 832 aa12.91□□□□□ -0.34
COL4A6-205ENST00000468338 NFXL1Q6ZNB6 911 aa12.91□□□□□ -0.34
COL4A6-205ENST00000468338 EEPD1Q7L9B9 569 aa12.91□□□□□ -0.34
COL4A6-205ENST00000468338 HOMER1Q86YM7 354 aa12.91□□□□□ -0.34
COL4A6-205ENST00000468338 CCDC82Q8N4S0 544 aa12.91□□□□□ -0.34
COL4A6-205ENST00000468338 BANK1Q8NDB2 785 aa12.91□□□□□ -0.34
COL4A6-205ENST00000468338 NSUN6Q8TEA1 469 aaKnown RBP12.91□□□□□ -0.34
COL4A6-205ENST00000468338 TCEANC2Q96MN5 208 aa12.91□□□□□ -0.34
COL4A6-205ENST00000468338 IWS1Q96ST2 819 aa12.91□□□□□ -0.34
COL4A6-205ENST00000468338 USP26Q9BXU7 913 aa12.91□□□□□ -0.34
COL4A6-205ENST00000468338 AGXT2Q9BYV1 514 aa12.91□□□□□ -0.34
COL4A6-205ENST00000468338 BRPF3Q9ULD4 1205 aa12.91□□□□□ -0.34
COL4A6-205ENST00000468338 KIAA1217Q5T5P2 1943 aa12.9□□□□□ -0.34
COL4A6-205ENST00000468338 A0A1W2PQ45 241 aaPredicted RBP12.9□□□□□ -0.34
COL4A6-205ENST00000468338 A0A1W2PQY0 241 aa12.9□□□□□ -0.34
COL4A6-205ENST00000468338 PLEKHA8P1O95397 391 aa12.9□□□□□ -0.34
COL4A6-205ENST00000468338 CFBP00751 764 aa12.9□□□□□ -0.34
COL4A6-205ENST00000468338 C6orf222P0C671 652 aaPredicted RBP12.9□□□□□ -0.34
COL4A6-205ENST00000468338 RXRAP19793 462 aa12.9□□□□□ -0.34
COL4A6-205ENST00000468338 RTP1P59025 263 aa12.9□□□□□ -0.34
COL4A6-205ENST00000468338 FUT2Q10981 343 aa12.9□□□□□ -0.34
COL4A6-205ENST00000468338 TMTC3Q6ZXV5 915 aa12.9□□□□□ -0.34
COL4A6-205ENST00000468338 TLK2Q86UE8 772 aa12.9□□□□□ -0.34
COL4A6-205ENST00000468338 PCSK9Q8NBP7 692 aaKnown RBP12.9□□□□□ -0.34
COL4A6-205ENST00000468338 FERMT2Q96AC1 680 aa12.9□□□□□ -0.34
COL4A6-205ENST00000468338 RMDN3Q96TC7 470 aa12.9□□□□□ -0.34
COL4A6-205ENST00000468338 MPHOSPH6Q99547 160 aaKnown RBP12.9□□□□□ -0.34
COL4A6-205ENST00000468338 GDF15Q99988 308 aa12.9□□□□□ -0.34
COL4A6-205ENST00000468338 SPC25Q9HBM1 224 aa12.9□□□□□ -0.34
COL4A6-205ENST00000468338 DNAH12Q6ZR08 3092 aa12.9□□□□□ -0.34
COL4A6-205ENST00000468338 ELP1O95163 1332 aa12.89□□□□□ -0.35
COL4A6-205ENST00000468338 RANBP2P49792 3224 aaKnown RBP12.89□□□□□ -0.35
COL4A6-205ENST00000468338 ASGR1P07306 291 aa12.89□□□□□ -0.35
COL4A6-205ENST00000468338 PTGS1P23219 599 aa12.89□□□□□ -0.35
COL4A6-205ENST00000468338 BMP8BP34820 402 aa12.89□□□□□ -0.35
COL4A6-205ENST00000468338 ARSIQ5FYB1 569 aa12.89□□□□□ -0.35
COL4A6-205ENST00000468338 HABP4Q5JVS0 413 aaKnown RBP12.89□□□□□ -0.35
COL4A6-205ENST00000468338 GNASQ5JWF2 1037 aa12.89□□□□□ -0.35
COL4A6-205ENST00000468338 CCDC62Q6P9F0 684 aa12.89□□□□□ -0.35
COL4A6-205ENST00000468338 ANKRD33Q7Z3H0 272 aa12.89□□□□□ -0.35
COL4A6-205ENST00000468338 SCFD2Q8WU76 684 aa12.89□□□□□ -0.35
COL4A6-205ENST00000468338 RRP36Q96EU6 259 aaKnown RBP12.89□□□□□ -0.35
COL4A6-205ENST00000468338 TOX2Q96NM4 488 aa12.89□□□□□ -0.35
COL4A6-205ENST00000468338 WDR11Q9BZH6 1224 aa12.89□□□□□ -0.35
COL4A6-205ENST00000468338 ZSWIM6Q9HCJ5 1215 aa12.89□□□□□ -0.35
COL4A6-205ENST00000468338 PXMP2Q9NR77 195 aa12.89□□□□□ -0.35
COL4A6-205ENST00000468338 NKRFO15226 690 aaKnown RBP eCLIP12.88□□□□□ -0.35
COL4A6-205ENST00000468338 DYNC1LI2O43237 492 aaPredicted RBP12.88□□□□□ -0.35
COL4A6-205ENST00000468338 ZBTB43O43298 467 aa12.88□□□□□ -0.35
COL4A6-205ENST00000468338 NR3C2P08235 984 aa12.88□□□□□ -0.35
COL4A6-205ENST00000468338 CPA1P15085 419 aa12.88□□□□□ -0.35
COL4A6-205ENST00000468338 CDK7P50613 346 aa12.88□□□□□ -0.35
COL4A6-205ENST00000468338 EVCP57679 992 aa12.88□□□□□ -0.35
COL4A6-205ENST00000468338 FSCN1Q16658 493 aaKnown RBP12.88□□□□□ -0.35
COL4A6-205ENST00000468338 TRIM60Q495X7 471 aa12.88□□□□□ -0.35
COL4A6-205ENST00000468338 TMEM259Q4ZIN3 620 aa12.88□□□□□ -0.35
COL4A6-205ENST00000468338 SYNE3Q6ZMZ3 975 aa12.88□□□□□ -0.35
COL4A6-205ENST00000468338 MICU3Q86XE3 530 aa12.88□□□□□ -0.35
COL4A6-205ENST00000468338 CMTR1Q8N1G2 835 aaKnown RBP12.88□□□□□ -0.35
COL4A6-205ENST00000468338 JAKMIP1Q96N16 626 aaKnown RBP12.88□□□□□ -0.35
COL4A6-205ENST00000468338 PDCD2LQ9BRP1 358 aa12.88□□□□□ -0.35
COL4A6-205ENST00000468338 RBM28Q9NW13 759 aaKnown RBP12.88□□□□□ -0.35
COL4A6-205ENST00000468338 ZMYND8Q9ULU4 1186 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms