RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 TCEANC2Q96MN5 208 aa19.76■□□□□ 0.75
SSBP1-207ENST00000468267 PPP4R2Q9NY27 417 aa19.76■□□□□ 0.75
SSBP1-207ENST00000468267 SEC63Q9UGP8 760 aaKnown RBP19.76■□□□□ 0.75
SSBP1-207ENST00000468267 GH1P01241 217 aa19.75■□□□□ 0.75
SSBP1-207ENST00000468267 HMGB1P09429 215 aaKnown RBP19.75■□□□□ 0.75
SSBP1-207ENST00000468267 MYCLP12524 364 aaPredicted RBP19.75■□□□□ 0.75
SSBP1-207ENST00000468267 PGM5Q15124 567 aa19.75■□□□□ 0.75
SSBP1-207ENST00000468267 SHHQ15465 462 aa19.75■□□□□ 0.75
SSBP1-207ENST00000468267 GPR153Q6NV75 609 aa19.75■□□□□ 0.75
SSBP1-207ENST00000468267 APOA5Q6Q788 366 aa19.75■□□□□ 0.75
SSBP1-207ENST00000468267 TMTC3Q6ZXV5 915 aa19.75■□□□□ 0.75
SSBP1-207ENST00000468267 FCHSD1Q86WN1 690 aa19.75■□□□□ 0.75
SSBP1-207ENST00000468267 MICU3Q86XE3 530 aa19.75■□□□□ 0.75
SSBP1-207ENST00000468267 MTG1Q9BT17 334 aaPredicted RBP19.75■□□□□ 0.75
SSBP1-207ENST00000468267 DDX41Q9UJV9 622 aaKnown RBP19.75■□□□□ 0.75
SSBP1-207ENST00000468267 HSPA4P34932 840 aa19.74■□□□□ 0.75
SSBP1-207ENST00000468267 FPGSQ05932 587 aa19.74■□□□□ 0.75
SSBP1-207ENST00000468267 ARHGAP1Q07960 439 aa19.74■□□□□ 0.75
SSBP1-207ENST00000468267 C9orf50Q5SZB4 431 aa19.74■□□□□ 0.75
SSBP1-207ENST00000468267 IL31RAQ8NI17 732 aa19.74■□□□□ 0.75
SSBP1-207ENST00000468267 BRPF3Q9ULD4 1205 aa19.74■□□□□ 0.75
SSBP1-207ENST00000468267 RGS20O76081 388 aa19.73■□□□□ 0.75
SSBP1-207ENST00000468267 REC8O95072 547 aa19.73■□□□□ 0.75
SSBP1-207ENST00000468267 CCND2P30279 289 aa19.73■□□□□ 0.75
SSBP1-207ENST00000468267 EPHB4P54760 987 aa19.73■□□□□ 0.75
SSBP1-207ENST00000468267 MFSD5Q6N075 450 aa19.73■□□□□ 0.75
SSBP1-207ENST00000468267 CCDC82Q8N4S0 544 aa19.73■□□□□ 0.75
SSBP1-207ENST00000468267 AFG1LQ8WV93 481 aa19.73■□□□□ 0.75
SSBP1-207ENST00000468267 TRPV6Q9H1D0 765 aa19.73■□□□□ 0.75
SSBP1-207ENST00000468267 SNX14Q9Y5W7 946 aa19.73■□□□□ 0.75
SSBP1-207ENST00000468267 MRVI1Q9Y6F6 885 aa19.73■□□□□ 0.75
SSBP1-207ENST00000468267 COL6A3P12111 3177 aa19.73■□□□□ 0.75
SSBP1-207ENST00000468267 PIK3CDO00329 1044 aa19.72■□□□□ 0.75
SSBP1-207ENST00000468267 ZBTB43O43298 467 aa19.72■□□□□ 0.75
SSBP1-207ENST00000468267 NBPF20Q3BBV1 942 aa19.72■□□□□ 0.75
SSBP1-207ENST00000468267 KCNV1Q6PIU1 500 aa19.72■□□□□ 0.75
SSBP1-207ENST00000468267 EMID1Q96A84 441 aaPredicted RBP19.72■□□□□ 0.75
SSBP1-207ENST00000468267 ALDH8A1Q9H2A2 487 aaPredicted RBP19.72■□□□□ 0.75
SSBP1-207ENST00000468267 RBM28Q9NW13 759 aaKnown RBP19.72■□□□□ 0.75
SSBP1-207ENST00000468267 FRMPD4Q14CM0 1322 aa19.72■□□□□ 0.75
SSBP1-207ENST00000468267 hCG_1642624A0A1W2PR95 340 aa19.71■□□□□ 0.75
SSBP1-207ENST00000468267 MEIS2O14770 477 aa19.71■□□□□ 0.75
SSBP1-207ENST00000468267 B4GALT4O60513 344 aa19.71■□□□□ 0.75
SSBP1-207ENST00000468267 USP17L6PQ6QN14 398 aa19.71■□□□□ 0.75
SSBP1-207ENST00000468267 CUL5Q93034 780 aa19.71■□□□□ 0.75
SSBP1-207ENST00000468267 JAKMIP1Q96N16 626 aaKnown RBP19.71■□□□□ 0.75
SSBP1-207ENST00000468267 KLF18A0A0U1RQI7 1052 aa19.7■□□□□ 0.74
SSBP1-207ENST00000468267 MMP3P08254 477 aa19.7■□□□□ 0.74
SSBP1-207ENST00000468267 TGFB3P10600 412 aa19.7■□□□□ 0.74
SSBP1-207ENST00000468267 CPA1P15085 419 aa19.7■□□□□ 0.74
SSBP1-207ENST00000468267 LAMC2Q13753 1193 aa19.7■□□□□ 0.74
SSBP1-207ENST00000468267 RTN1Q16799 776 aa19.7■□□□□ 0.74
SSBP1-207ENST00000468267 NFRKBQ6P4R8 1299 aa19.7■□□□□ 0.74
SSBP1-207ENST00000468267 DHX37Q8IY37 1157 aaKnown RBP19.7■□□□□ 0.74
SSBP1-207ENST00000468267 SMARCC2Q8TAQ2 1214 aa19.7■□□□□ 0.74
SSBP1-207ENST00000468267 PPP1R12CQ9BZL4 782 aa19.7■□□□□ 0.74
SSBP1-207ENST00000468267 PSTPIP2Q9H939 334 aa19.7■□□□□ 0.74
SSBP1-207ENST00000468267 EPB41L2O43491 1005 aaKnown RBP19.69■□□□□ 0.74
SSBP1-207ENST00000468267 STAM2O75886 525 aa19.69■□□□□ 0.74
SSBP1-207ENST00000468267 CASTP20810 708 aaKnown RBP19.69■□□□□ 0.74
SSBP1-207ENST00000468267 CYP2C18P33260 490 aa19.69■□□□□ 0.74
SSBP1-207ENST00000468267 RCAN1P53805 252 aa19.69■□□□□ 0.74
SSBP1-207ENST00000468267 MRPS9P82933 396 aaKnown RBP19.69■□□□□ 0.74
SSBP1-207ENST00000468267 FGD1P98174 961 aa19.69■□□□□ 0.74
SSBP1-207ENST00000468267 FUT2Q10981 343 aa19.69■□□□□ 0.74
SSBP1-207ENST00000468267 PPIGQ13427 754 aaKnown RBP eCLIP19.69■□□□□ 0.74
SSBP1-207ENST00000468267 DGKDQ16760 1214 aa19.69■□□□□ 0.74
SSBP1-207ENST00000468267 MYSM1Q5VVJ2 828 aa19.69■□□□□ 0.74
SSBP1-207ENST00000468267 BLOC1S2Q6QNY1 142 aa19.69■□□□□ 0.74
SSBP1-207ENST00000468267 TMEM199Q8N511 208 aa19.69■□□□□ 0.74
SSBP1-207ENST00000468267 ZFP91Q96JP5 570 aaPredicted RBP19.69■□□□□ 0.74
SSBP1-207ENST00000468267 NOC4LQ9BVI4 516 aaKnown RBP19.69■□□□□ 0.74
SSBP1-207ENST00000468267 HIPK3Q9H422 1215 aa19.69■□□□□ 0.74
SSBP1-207ENST00000468267 TRMT13Q9NUP7 481 aaKnown RBP19.69■□□□□ 0.74
SSBP1-207ENST00000468267 CNTNAP5Q8WYK1 1306 aa19.69■□□□□ 0.74
SSBP1-207ENST00000468267 CENPBP07199 599 aaPredicted RBP19.68■□□□□ 0.74
SSBP1-207ENST00000468267 SUPT20HL2P0C7V6 817 aa19.68■□□□□ 0.74
SSBP1-207ENST00000468267 SP2Q02086 613 aa19.68■□□□□ 0.74
SSBP1-207ENST00000468267 PTPN11Q06124 597 aaPredicted RBP19.68■□□□□ 0.74
SSBP1-207ENST00000468267 CELF3Q5SZQ8 465 aaKnown RBP19.68■□□□□ 0.74
SSBP1-207ENST00000468267 Q6ZUG5 572 aa19.68■□□□□ 0.74
SSBP1-207ENST00000468267 C16orf59Q7L2K0 433 aa19.68■□□□□ 0.74
SSBP1-207ENST00000468267 HEATR3Q7Z4Q2 680 aa19.68■□□□□ 0.74
SSBP1-207ENST00000468267 FBXL16Q8N461 479 aa19.68■□□□□ 0.74
SSBP1-207ENST00000468267 PPTC7Q8NI37 304 aa19.68■□□□□ 0.74
SSBP1-207ENST00000468267 FAM217BQ9NTX9 383 aaPredicted RBP19.68■□□□□ 0.74
SSBP1-207ENST00000468267 GOLGA8AA7E2F4 631 aa19.67■□□□□ 0.74
SSBP1-207ENST00000468267 GOLGA8BA8MQT2 603 aa19.67■□□□□ 0.74
SSBP1-207ENST00000468267 CSF2RAP15509 400 aa19.67■□□□□ 0.74
SSBP1-207ENST00000468267 PSMA5P28066 241 aa19.67■□□□□ 0.74
SSBP1-207ENST00000468267 ICAM3P32942 547 aa19.67■□□□□ 0.74
SSBP1-207ENST00000468267 GNPTABQ3T906 1256 aa19.67■□□□□ 0.74
SSBP1-207ENST00000468267 FAM47CQ5HY64 1035 aa19.67■□□□□ 0.74
SSBP1-207ENST00000468267 PCNX4Q63HM2 1172 aa19.67■□□□□ 0.74
SSBP1-207ENST00000468267 XRRA1Q6P2D8 792 aa19.67■□□□□ 0.74
SSBP1-207ENST00000468267 PPP1R13LQ8WUF5 828 aa19.67■□□□□ 0.74
SSBP1-207ENST00000468267 KAT2BQ92831 832 aa19.67■□□□□ 0.74
SSBP1-207ENST00000468267 GPKOWQ92917 476 aaPredicted RBP eCLIP19.67■□□□□ 0.74
SSBP1-207ENST00000468267 RNPC3Q96LT9 517 aaKnown RBP19.67■□□□□ 0.74
SSBP1-207ENST00000468267 INPP4AQ96PE3 977 aaPredicted RBP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms