RNA–Protein interactions for RNA: ENST00000468179.6

COMMD3-206, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,344 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-206ENST00000468179 VSIG10LQ86VR7 867 aa16.85■□□□□ 0.29
COMMD3-206ENST00000468179 FCHSD1Q86WN1 690 aa16.85■□□□□ 0.29
COMMD3-206ENST00000468179 SLC43A3Q8NBI5 491 aa16.85■□□□□ 0.29
COMMD3-206ENST00000468179 SMARCC2Q8TAQ2 1214 aa16.85■□□□□ 0.29
COMMD3-206ENST00000468179 BADQ92934 168 aa16.85■□□□□ 0.29
COMMD3-206ENST00000468179 TRIM43Q96BQ3 446 aaPredicted RBP16.85■□□□□ 0.29
COMMD3-206ENST00000468179 MTG1Q9BT17 334 aaPredicted RBP16.85■□□□□ 0.29
COMMD3-206ENST00000468179 MRVI1Q9Y6F6 885 aa16.85■□□□□ 0.29
COMMD3-206ENST00000468179 MYL3P08590 195 aa16.84■□□□□ 0.29
COMMD3-206ENST00000468179 TGFB3P10600 412 aa16.84■□□□□ 0.29
COMMD3-206ENST00000468179 PGM5Q15124 567 aa16.84■□□□□ 0.29
COMMD3-206ENST00000468179 RTN1Q16799 776 aa16.84■□□□□ 0.29
COMMD3-206ENST00000468179 TMEM63BQ5T3F8 832 aa16.84■□□□□ 0.29
COMMD3-206ENST00000468179 SH3RF1Q7Z6J0 888 aa16.84■□□□□ 0.29
COMMD3-206ENST00000468179 TEX2Q8IWB9 1127 aa16.84■□□□□ 0.29
COMMD3-206ENST00000468179 JAKMIP1Q96N16 626 aaKnown RBP16.84■□□□□ 0.29
COMMD3-206ENST00000468179 SNX14Q9Y5W7 946 aa16.84■□□□□ 0.29
COMMD3-206ENST00000468179 LCTP09848 1927 aa16.83■□□□□ 0.29
COMMD3-206ENST00000468179 PIK3CDO00329 1044 aa16.83■□□□□ 0.28
COMMD3-206ENST00000468179 TIMP1P01033 207 aa16.83■□□□□ 0.28
COMMD3-206ENST00000468179 SUPT20HL2P0C7V6 817 aa16.83■□□□□ 0.28
COMMD3-206ENST00000468179 PURAQ00577 322 aaKnown RBP16.83■□□□□ 0.28
COMMD3-206ENST00000468179 LAMC2Q13753 1193 aa16.83■□□□□ 0.28
COMMD3-206ENST00000468179 LY6KQ17RY6 165 aa16.83■□□□□ 0.28
COMMD3-206ENST00000468179 GNPTABQ3T906 1256 aa16.83■□□□□ 0.28
COMMD3-206ENST00000468179 XRRA1Q6P2D8 792 aa16.83■□□□□ 0.28
COMMD3-206ENST00000468179 FAM126BQ8IXS8 530 aa16.83■□□□□ 0.28
COMMD3-206ENST00000468179 CCDC82Q8N4S0 544 aa16.83■□□□□ 0.28
COMMD3-206ENST00000468179 PSTPIP2Q9H939 334 aa16.83■□□□□ 0.28
COMMD3-206ENST00000468179 DDX41Q9UJV9 622 aaKnown RBP16.83■□□□□ 0.28
COMMD3-206ENST00000468179 NAP1L2Q9ULW6 460 aaPredicted RBP16.83■□□□□ 0.28
COMMD3-206ENST00000468179 LRRC37A2A6NM11 1700 aa16.83■□□□□ 0.28
COMMD3-206ENST00000468179 KLF18A0A0U1RQI7 1052 aa16.82■□□□□ 0.28
COMMD3-206ENST00000468179 GOLGA8AA7E2F4 631 aa16.82■□□□□ 0.28
COMMD3-206ENST00000468179 GOLGA8BA8MQT2 603 aa16.82■□□□□ 0.28
COMMD3-206ENST00000468179 hCG_1984214I3L0E3 225 aa16.82■□□□□ 0.28
COMMD3-206ENST00000468179 ARIH2O95376 493 aa16.82■□□□□ 0.28
COMMD3-206ENST00000468179 CASTP20810 708 aaKnown RBP16.82■□□□□ 0.28
COMMD3-206ENST00000468179 PTGS1P23219 599 aa16.82■□□□□ 0.28
COMMD3-206ENST00000468179 FPGSQ05932 587 aa16.82■□□□□ 0.28
COMMD3-206ENST00000468179 COL9A3Q14050 684 aaPredicted RBP16.82■□□□□ 0.28
COMMD3-206ENST00000468179 GPR153Q6NV75 609 aa16.82■□□□□ 0.28
COMMD3-206ENST00000468179 RAB11FIP4Q86YS3 637 aa16.82■□□□□ 0.28
COMMD3-206ENST00000468179 DHX37Q8IY37 1157 aaKnown RBP16.82■□□□□ 0.28
COMMD3-206ENST00000468179 CMTR1Q8N1G2 835 aaKnown RBP16.82■□□□□ 0.28
COMMD3-206ENST00000468179 FBXL16Q8N461 479 aa16.82■□□□□ 0.28
COMMD3-206ENST00000468179 TMEM199Q8N511 208 aa16.82■□□□□ 0.28
COMMD3-206ENST00000468179 ZNF713Q8N859 430 aaPredicted RBP16.82■□□□□ 0.28
COMMD3-206ENST00000468179 COPS5Q92905 334 aa16.82■□□□□ 0.28
COMMD3-206ENST00000468179 EMID1Q96A84 441 aaPredicted RBP16.82■□□□□ 0.28
COMMD3-206ENST00000468179 TCEANC2Q96MN5 208 aa16.82■□□□□ 0.28
COMMD3-206ENST00000468179 TBX21Q9UL17 535 aa16.82■□□□□ 0.28
COMMD3-206ENST00000468179 BRPF3Q9ULD4 1205 aa16.82■□□□□ 0.28
COMMD3-206ENST00000468179 CD4P01730 458 aa16.81■□□□□ 0.28
COMMD3-206ENST00000468179 RPS6KB1P23443 525 aa16.81■□□□□ 0.28
COMMD3-206ENST00000468179 PTPN11Q06124 597 aaPredicted RBP16.81■□□□□ 0.28
COMMD3-206ENST00000468179 DGKDQ16760 1214 aa16.81■□□□□ 0.28
COMMD3-206ENST00000468179 Q6ZUG5 572 aa16.81■□□□□ 0.28
COMMD3-206ENST00000468179 EHMT1Q9H9B1 1298 aa16.81■□□□□ 0.28
COMMD3-206ENST00000468179 MYH6P13533 1939 aa16.81■□□□□ 0.28
COMMD3-206ENST00000468179 METAP2P50579 478 aaKnown RBP eCLIP16.8■□□□□ 0.28
COMMD3-206ENST00000468179 PSMC6P62333 389 aa16.8■□□□□ 0.28
COMMD3-206ENST00000468179 PPIGQ13427 754 aaKnown RBP eCLIP16.8■□□□□ 0.28
COMMD3-206ENST00000468179 MFSD5Q6N075 450 aa16.8■□□□□ 0.28
COMMD3-206ENST00000468179 NFRKBQ6P4R8 1299 aa16.8■□□□□ 0.28
COMMD3-206ENST00000468179 HEATR3Q7Z4Q2 680 aa16.8■□□□□ 0.28
COMMD3-206ENST00000468179 AFG1LQ8WV93 481 aa16.8■□□□□ 0.28
COMMD3-206ENST00000468179 GLT8D2Q9H1C3 349 aa16.8■□□□□ 0.28
COMMD3-206ENST00000468179 FARP1Q9Y4F1 1045 aaPredicted RBP16.8■□□□□ 0.28
COMMD3-206ENST00000468179 FRMPD4Q14CM0 1322 aa16.8■□□□□ 0.28
COMMD3-206ENST00000468179 SPDYE3A6NKU9 549 aa16.79■□□□□ 0.28
COMMD3-206ENST00000468179 MEIS2O14770 477 aa16.79■□□□□ 0.28
COMMD3-206ENST00000468179 MMP3P08254 477 aa16.79■□□□□ 0.28
COMMD3-206ENST00000468179 ARHGAP1Q07960 439 aa16.79■□□□□ 0.28
COMMD3-206ENST00000468179 PCNX4Q63HM2 1172 aa16.79■□□□□ 0.28
COMMD3-206ENST00000468179 PPP1R18Q6NYC8 613 aa16.79■□□□□ 0.28
COMMD3-206ENST00000468179 USP17L6PQ6QN14 398 aa16.79■□□□□ 0.28
COMMD3-206ENST00000468179 NLRX1Q86UT6 975 aa16.79■□□□□ 0.28
COMMD3-206ENST00000468179 PPTC7Q8NI37 304 aa16.79■□□□□ 0.28
COMMD3-206ENST00000468179 BRF1Q92994 677 aa16.79■□□□□ 0.28
COMMD3-206ENST00000468179 KATNAL1Q9BW62 490 aa16.79■□□□□ 0.28
COMMD3-206ENST00000468179 USP26Q9BXU7 913 aa16.79■□□□□ 0.28
COMMD3-206ENST00000468179 ALDH8A1Q9H2A2 487 aaPredicted RBP16.79■□□□□ 0.28
COMMD3-206ENST00000468179 V9GY48 417 aaPredicted RBP16.79■□□□□ 0.28
COMMD3-206ENST00000468179 GRIN2DO15399 1336 aa16.79■□□□□ 0.28
COMMD3-206ENST00000468179 PPFIA4O75335 1185 aa16.78■□□□□ 0.28
COMMD3-206ENST00000468179 ITGB8P26012 769 aa16.78■□□□□ 0.28
COMMD3-206ENST00000468179 NEDD9Q14511 834 aa16.78■□□□□ 0.28
COMMD3-206ENST00000468179 NBPF20Q3BBV1 942 aa16.78■□□□□ 0.28
COMMD3-206ENST00000468179 FAM47CQ5HY64 1035 aa16.78■□□□□ 0.28
COMMD3-206ENST00000468179 CELF3Q5SZQ8 465 aaKnown RBP16.78■□□□□ 0.28
COMMD3-206ENST00000468179 IL31RAQ8NI17 732 aa16.78■□□□□ 0.28
COMMD3-206ENST00000468179 HIPK3Q9H422 1215 aa16.78■□□□□ 0.28
COMMD3-206ENST00000468179 MLXIPQ9HAP2 919 aa16.78■□□□□ 0.28
COMMD3-206ENST00000468179 CYP46A1Q9Y6A2 500 aa16.78■□□□□ 0.28
COMMD3-206ENST00000468179 CNTNAP5Q8WYK1 1306 aa16.78■□□□□ 0.28
COMMD3-206ENST00000468179 hCG_1642624A0A1W2PR95 340 aa16.77■□□□□ 0.28
COMMD3-206ENST00000468179 FIBPO43427 364 aa16.77■□□□□ 0.28
COMMD3-206ENST00000468179 B4GALT4O60513 344 aa16.77■□□□□ 0.28
COMMD3-206ENST00000468179 RGS20O76081 388 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms