RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 KRT25Q7Z3Z0 450 aa6.8□□□□□ -1.32
USP39-213ENST00000467885 VSIG10LQ86VR7 867 aa6.8□□□□□ -1.32
USP39-213ENST00000467885 FCHSD1Q86WN1 690 aa6.8□□□□□ -1.32
USP39-213ENST00000467885 NCAPG2Q86XI2 1143 aa6.8□□□□□ -1.32
USP39-213ENST00000467885 FAM133AQ8N9E0 248 aa6.8□□□□□ -1.32
USP39-213ENST00000467885 TBCKQ8TEA7 893 aa6.8□□□□□ -1.32
USP39-213ENST00000467885 GTF3C2Q8WUA4 911 aaPredicted RBP6.8□□□□□ -1.32
USP39-213ENST00000467885 PGBD1Q96JS3 809 aa6.8□□□□□ -1.32
USP39-213ENST00000467885 MBOAT7Q96N66 472 aa6.8□□□□□ -1.32
USP39-213ENST00000467885 ZBED2Q9BTP6 218 aa6.8□□□□□ -1.32
USP39-213ENST00000467885 CRISPLD2Q9H0B8 497 aa6.8□□□□□ -1.32
USP39-213ENST00000467885 A1CFQ9NQ94 594 aaKnown RBP6.8□□□□□ -1.32
USP39-213ENST00000467885 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.8□□□□□ -1.32
USP39-213ENST00000467885 HOMER2Q9NSB8 354 aa6.8□□□□□ -1.32
USP39-213ENST00000467885 RTEL1Q9NZ71 1219 aa6.8□□□□□ -1.32
USP39-213ENST00000467885 PCDHB6Q9Y5E3 794 aa6.8□□□□□ -1.32
USP39-213ENST00000467885 BAZ2BQ9UIF8 2168 aaKnown RBP6.79□□□□□ -1.32
USP39-213ENST00000467885 ASTN1O14525 1302 aa6.79□□□□□ -1.32
USP39-213ENST00000467885 MEIS1O00470 390 aa6.79□□□□□ -1.32
USP39-213ENST00000467885 TRPA1O75762 1119 aa6.79□□□□□ -1.32
USP39-213ENST00000467885 IGHA2P01877 340 aa6.79□□□□□ -1.32
USP39-213ENST00000467885 PTPREP23469 700 aa6.79□□□□□ -1.32
USP39-213ENST00000467885 SREBF1P36956 1147 aa6.79□□□□□ -1.32
USP39-213ENST00000467885 TRAPPC10P48553 1259 aa6.79□□□□□ -1.32
USP39-213ENST00000467885 MRPS9P82933 396 aaKnown RBP6.79□□□□□ -1.32
USP39-213ENST00000467885 CAP1Q01518 475 aa6.79□□□□□ -1.32
USP39-213ENST00000467885 AP3B2Q13367 1082 aa6.79□□□□□ -1.32
USP39-213ENST00000467885 NONOQ15233 471 aaKnown RBP eCLIP6.79□□□□□ -1.32
USP39-213ENST00000467885 SF3A1Q15459 793 aaKnown RBP6.79□□□□□ -1.32
USP39-213ENST00000467885 IL17AQ16552 155 aa6.79□□□□□ -1.32
USP39-213ENST00000467885 FAM110CQ1W6H9 321 aa6.79□□□□□ -1.32
USP39-213ENST00000467885 INF2Q27J81 1249 aa6.79□□□□□ -1.32
USP39-213ENST00000467885 ZNF792Q3KQV3 632 aa6.79□□□□□ -1.32
USP39-213ENST00000467885 RILPL1Q5EBL4 403 aa6.79□□□□□ -1.32
USP39-213ENST00000467885 ANO1Q5XXA6 986 aa6.79□□□□□ -1.32
USP39-213ENST00000467885 PPP4R3AQ6IN85 833 aa6.79□□□□□ -1.32
USP39-213ENST00000467885 NSMFQ6X4W1 530 aa6.79□□□□□ -1.32
USP39-213ENST00000467885 ABRAQ8N0Z2 381 aa6.79□□□□□ -1.32
USP39-213ENST00000467885 REXO1Q8N1G1 1221 aaKnown RBP6.79□□□□□ -1.32
USP39-213ENST00000467885 LINC00301Q8NCQ3 95 aa6.79□□□□□ -1.32
USP39-213ENST00000467885 CYP2W1Q8TAV3 490 aa6.79□□□□□ -1.32
USP39-213ENST00000467885 SMCR8Q8TEV9 937 aaPredicted RBP6.79□□□□□ -1.32
USP39-213ENST00000467885 USP6NLQ92738 828 aa6.79□□□□□ -1.32
USP39-213ENST00000467885 FGD4Q96M96 766 aa6.79□□□□□ -1.32
USP39-213ENST00000467885 ZNF396Q96N95 335 aaPredicted RBP6.79□□□□□ -1.32
USP39-213ENST00000467885 MTMR9Q96QG7 549 aa6.79□□□□□ -1.32
USP39-213ENST00000467885 RMDN3Q96TC7 470 aa6.79□□□□□ -1.32
USP39-213ENST00000467885 PARK7Q99497 189 aaKnown RBP6.79□□□□□ -1.32
USP39-213ENST00000467885 FTOQ9C0B1 505 aaKnown RBP eCLIP6.79□□□□□ -1.32
USP39-213ENST00000467885 ACAD9Q9H845 621 aa6.79□□□□□ -1.32
USP39-213ENST00000467885 BRMS1Q9HCU9 246 aa6.79□□□□□ -1.32
USP39-213ENST00000467885 FBXO40Q9UH90 709 aa6.79□□□□□ -1.32
USP39-213ENST00000467885 CFAP45Q9UL16 551 aa6.79□□□□□ -1.32
USP39-213ENST00000467885 DOCK1Q14185 1865 aa6.79□□□□□ -1.32
USP39-213ENST00000467885 RPTORQ8N122 1335 aa6.78□□□□□ -1.32
USP39-213ENST00000467885 RLFQ13129 1914 aa6.78□□□□□ -1.32
USP39-213ENST00000467885 IGLV3-22A0A075B6J6 115 aa6.78□□□□□ -1.32
USP39-213ENST00000467885 CCDC194A0A1B0GVG4 234 aa6.78□□□□□ -1.32
USP39-213ENST00000467885 FAM86B1E9PN63 330 aa6.78□□□□□ -1.32
USP39-213ENST00000467885 NR3C2P08235 984 aa6.78□□□□□ -1.32
USP39-213ENST00000467885 FAM86B2P0C5J1 330 aa6.78□□□□□ -1.32
USP39-213ENST00000467885 FCER1AP12319 257 aa6.78□□□□□ -1.32
USP39-213ENST00000467885 ATP2B1P20020 1258 aa6.78□□□□□ -1.32
USP39-213ENST00000467885 COPB2P35606 906 aa6.78□□□□□ -1.32
USP39-213ENST00000467885 NASPP49321 788 aaPredicted RBP6.78□□□□□ -1.32
USP39-213ENST00000467885 CCNA1P78396 465 aa6.78□□□□□ -1.32
USP39-213ENST00000467885 ARHGAP4P98171 946 aa6.78□□□□□ -1.32
USP39-213ENST00000467885 CEBPZQ03701 1054 aaKnown RBP6.78□□□□□ -1.32
USP39-213ENST00000467885 PTGDRQ13258 359 aa6.78□□□□□ -1.32
USP39-213ENST00000467885 PPP1R15BQ5SWA1 713 aa6.78□□□□□ -1.32
USP39-213ENST00000467885 MORN1Q5T089 497 aa6.78□□□□□ -1.32
USP39-213ENST00000467885 AXDND1Q5T1B0 1012 aaPredicted RBP6.78□□□□□ -1.32
USP39-213ENST00000467885 SLC30A10Q6XR72 485 aa6.78□□□□□ -1.32
USP39-213ENST00000467885 GPR142Q7Z601 462 aa6.78□□□□□ -1.32
USP39-213ENST00000467885 PLEKHH3Q7Z736 793 aa6.78□□□□□ -1.32
USP39-213ENST00000467885 NEK8Q86SG6 692 aa6.78□□□□□ -1.32
USP39-213ENST00000467885 ANKRD35Q8N283 1001 aa6.78□□□□□ -1.32
USP39-213ENST00000467885 MORC4Q8TE76 937 aa6.78□□□□□ -1.32
USP39-213ENST00000467885 NSUN6Q8TEA1 469 aaKnown RBP6.78□□□□□ -1.32
USP39-213ENST00000467885 LEO1Q8WVC0 666 aaPredicted RBP6.78□□□□□ -1.32
USP39-213ENST00000467885 IWS1Q96ST2 819 aa6.78□□□□□ -1.32
USP39-213ENST00000467885 PDCD2LQ9BRP1 358 aa6.78□□□□□ -1.32
USP39-213ENST00000467885 ANO3Q9BYT9 981 aa6.78□□□□□ -1.32
USP39-213ENST00000467885 TMEM60Q9H2L4 133 aa6.78□□□□□ -1.32
USP39-213ENST00000467885 PXMP2Q9NR77 195 aa6.78□□□□□ -1.32
USP39-213ENST00000467885 LMBRD1Q9NUN5 540 aa6.78□□□□□ -1.32
USP39-213ENST00000467885 POLR3EQ9NVU0 708 aa6.78□□□□□ -1.32
USP39-213ENST00000467885 CNPY2Q9Y2B0 182 aa6.78□□□□□ -1.32
USP39-213ENST00000467885 ATP6V1DQ9Y5K8 247 aa6.78□□□□□ -1.32
USP39-213ENST00000467885 UBIAD1Q9Y5Z9 338 aa6.78□□□□□ -1.32
USP39-213ENST00000467885 MRVI1Q9Y6F6 885 aa6.78□□□□□ -1.32
USP39-213ENST00000467885 DDX49Q9Y6V7 483 aaKnown RBP6.78□□□□□ -1.32
USP39-213ENST00000467885 MORC2Q9Y6X9 1032 aaPredicted RBP6.78□□□□□ -1.32
USP39-213ENST00000467885 SLC15A5A6NIM6 579 aa6.77□□□□□ -1.33
USP39-213ENST00000467885 SPDYE3A6NKU9 549 aa6.77□□□□□ -1.33
USP39-213ENST00000467885 GADD45BO75293 160 aaPredicted RBP6.77□□□□□ -1.33
USP39-213ENST00000467885 PRPF40AO75400 957 aaKnown RBP6.77□□□□□ -1.33
USP39-213ENST00000467885 TDP2O95551 362 aa6.77□□□□□ -1.33
USP39-213ENST00000467885 PGK2P07205 417 aa6.77□□□□□ -1.33
USP39-213ENST00000467885 HOXC6P09630 235 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms