RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 AFDNP55196 1824 aaKnown RBP5.83□□□□□ -1.48
SSR3-204ENST00000467733 KIF20BQ96Q89 1820 aa5.83□□□□□ -1.48
SSR3-204ENST00000467733 ANKRD26Q9UPS8 1709 aa5.82□□□□□ -1.48
SSR3-204ENST00000467733 KDRP35968 1356 aa5.82□□□□□ -1.48
SSR3-204ENST00000467733 MAP3K19Q56UN5 1328 aa5.82□□□□□ -1.48
SSR3-204ENST00000467733 MYOCOSA0A1B0GUC4 107 aa5.82□□□□□ -1.48
SSR3-204ENST00000467733 FOXN1O15353 648 aa5.82□□□□□ -1.48
SSR3-204ENST00000467733 FOXD2O60548 495 aaPredicted RBP5.82□□□□□ -1.48
SSR3-204ENST00000467733 SYN1P17600 705 aa5.82□□□□□ -1.48
SSR3-204ENST00000467733 DUSP4Q13115 394 aa5.82□□□□□ -1.48
SSR3-204ENST00000467733 NFIXQ14938 502 aa5.82□□□□□ -1.48
SSR3-204ENST00000467733 TMCO4Q5TGY1 634 aa5.82□□□□□ -1.48
SSR3-204ENST00000467733 DBX2Q6ZNG2 339 aa5.82□□□□□ -1.48
SSR3-204ENST00000467733 HDGFL2Q7Z4V5 671 aaPredicted RBP5.82□□□□□ -1.48
SSR3-204ENST00000467733 DTWD2Q8NBA8 298 aa5.82□□□□□ -1.48
SSR3-204ENST00000467733 RAPGEF4Q8WZA2 1011 aa5.82□□□□□ -1.48
SSR3-204ENST00000467733 ZNF552Q9H707 407 aaPredicted RBP5.82□□□□□ -1.48
SSR3-204ENST00000467733 RTEL1Q9NZ71 1219 aa5.82□□□□□ -1.48
SSR3-204ENST00000467733 CEP131Q9UPN4 1083 aa5.82□□□□□ -1.48
SSR3-204ENST00000467733 THSD7BQ9C0I4 1608 aa5.81□□□□□ -1.48
SSR3-204ENST00000467733 A0A0G2JLL6 359 aaPredicted RBP5.81□□□□□ -1.48
SSR3-204ENST00000467733 WASH4PA8MWX3 477 aa5.81□□□□□ -1.48
SSR3-204ENST00000467733 PRPF40AO75400 957 aaKnown RBP5.81□□□□□ -1.48
SSR3-204ENST00000467733 VEGFAP15692 232 aaPredicted RBP5.81□□□□□ -1.48
SSR3-204ENST00000467733 KCNA3P22001 575 aa5.81□□□□□ -1.48
SSR3-204ENST00000467733 PDE6BP35913 854 aa5.81□□□□□ -1.48
SSR3-204ENST00000467733 CTCFP49711 727 aaPredicted RBP5.81□□□□□ -1.48
SSR3-204ENST00000467733 ITPK1Q13572 414 aa5.81□□□□□ -1.48
SSR3-204ENST00000467733 SEPT6Q14141 434 aa5.81□□□□□ -1.48
SSR3-204ENST00000467733 DALRD3Q5D0E6 543 aaKnown RBP5.81□□□□□ -1.48
SSR3-204ENST00000467733 NBPF6Q5VWK0 638 aa5.81□□□□□ -1.48
SSR3-204ENST00000467733 DIEXFQ68CQ4 756 aaKnown RBP5.81□□□□□ -1.48
SSR3-204ENST00000467733 MCATQ8IVS2 390 aaKnown RBP5.81□□□□□ -1.48
SSR3-204ENST00000467733 NLGN1Q8N2Q7 840 aa5.81□□□□□ -1.48
SSR3-204ENST00000467733 ANKS4BQ8N8V4 417 aa5.81□□□□□ -1.48
SSR3-204ENST00000467733 CYB5D2Q8WUJ1 264 aa5.81□□□□□ -1.48
SSR3-204ENST00000467733 NBPF4Q96M43 638 aa5.81□□□□□ -1.48
SSR3-204ENST00000467733 KCTD3Q9Y597 815 aa5.81□□□□□ -1.48
SSR3-204ENST00000467733 NRXN2Q9P2S2 1712 aa5.81□□□□□ -1.48
SSR3-204ENST00000467733 ADAMTS7Q9UKP4 1686 aa5.81□□□□□ -1.48
SSR3-204ENST00000467733 FER1L6Q2WGJ9 1857 aa5.81□□□□□ -1.48
SSR3-204ENST00000467733 NCAPD2Q15021 1401 aa5.81□□□□□ -1.48
SSR3-204ENST00000467733 ROCK2O75116 1388 aaKnown RBP5.8□□□□□ -1.48
SSR3-204ENST00000467733 CNTNAP1P78357 1384 aa5.8□□□□□ -1.48
SSR3-204ENST00000467733 CYP27B1O15528 508 aa5.8□□□□□ -1.48
SSR3-204ENST00000467733 AMPHP49418 695 aa5.8□□□□□ -1.48
SSR3-204ENST00000467733 TMF1P82094 1093 aa5.8□□□□□ -1.48
SSR3-204ENST00000467733 CCDC85BQ15834 202 aaPredicted RBP5.8□□□□□ -1.48
SSR3-204ENST00000467733 TIGD5Q53EQ6 642 aa5.8□□□□□ -1.48
SSR3-204ENST00000467733 ERICH6BQ5W0A0 696 aa5.8□□□□□ -1.48
SSR3-204ENST00000467733 USHBP1Q8N6Y0 703 aa5.8□□□□□ -1.48
SSR3-204ENST00000467733 PIGBQ92521 554 aa5.8□□□□□ -1.48
SSR3-204ENST00000467733 SETDB2Q96T68 719 aa5.8□□□□□ -1.48
SSR3-204ENST00000467733 BCL11AQ9H165 835 aa5.8□□□□□ -1.48
SSR3-204ENST00000467733 MIR1-1HGQ9H1L0 117 aa5.8□□□□□ -1.48
SSR3-204ENST00000467733 TERF2IPQ9NYB0 399 aa5.8□□□□□ -1.48
SSR3-204ENST00000467733 GPR160Q9UJ42 338 aa5.8□□□□□ -1.48
SSR3-204ENST00000467733 PCDHA11Q9Y5I1 949 aa5.8□□□□□ -1.48
SSR3-204ENST00000467733 SCN4AP35499 1836 aa5.8□□□□□ -1.48
SSR3-204ENST00000467733 TJP1Q07157 1748 aa5.79□□□□□ -1.48
SSR3-204ENST00000467733 GLTPD2A6NH11 291 aa5.79□□□□□ -1.48
SSR3-204ENST00000467733 HRKO00198 91 aa5.79□□□□□ -1.48
SSR3-204ENST00000467733 GYS1P13807 737 aa5.79□□□□□ -1.48
SSR3-204ENST00000467733 DNAJC14Q6Y2X3 702 aaPredicted RBP5.79□□□□□ -1.48
SSR3-204ENST00000467733 RNF141Q8WVD5 230 aa5.79□□□□□ -1.48
SSR3-204ENST00000467733 ABHD8Q96I13 439 aa5.79□□□□□ -1.48
SSR3-204ENST00000467733 COG3Q96JB2 828 aa5.79□□□□□ -1.48
SSR3-204ENST00000467733 GCM1Q9NP62 436 aa5.79□□□□□ -1.48
SSR3-204ENST00000467733 INSRP06213 1382 aa5.79□□□□□ -1.48
SSR3-204ENST00000467733 ARFGEF2Q9Y6D5 1785 aa5.78□□□□□ -1.48
SSR3-204ENST00000467733 OR14I1A6ND48 311 aa5.78□□□□□ -1.48
SSR3-204ENST00000467733 TRIM13O60858 407 aa5.78□□□□□ -1.48
SSR3-204ENST00000467733 SASH1O94885 1247 aa5.78□□□□□ -1.48
SSR3-204ENST00000467733 COL11A2P13942 1736 aaPredicted RBP5.78□□□□□ -1.48
SSR3-204ENST00000467733 EIF4BP23588 611 aaKnown RBP5.78□□□□□ -1.48
SSR3-204ENST00000467733 GNA15P30679 374 aa5.78□□□□□ -1.48
SSR3-204ENST00000467733 RGS19P49795 217 aa5.78□□□□□ -1.48
SSR3-204ENST00000467733 CACNA1SQ13698 1873 aa5.78□□□□□ -1.48
SSR3-204ENST00000467733 TSNAXIP1Q2TAA8 658 aa5.78□□□□□ -1.48
SSR3-204ENST00000467733 AGMOQ6ZNB7 445 aa5.78□□□□□ -1.48
SSR3-204ENST00000467733 CXorf38Q8TB03 319 aa5.78□□□□□ -1.48
SSR3-204ENST00000467733 ACSF2Q96CM8 615 aaPredicted RBP5.78□□□□□ -1.48
SSR3-204ENST00000467733 BORCS6Q96GS4 357 aa5.78□□□□□ -1.48
SSR3-204ENST00000467733 TMOD3Q9NYL9 352 aa5.78□□□□□ -1.48
SSR3-204ENST00000467733 PCDHB5Q9Y5E4 795 aa5.78□□□□□ -1.48
SSR3-204ENST00000467733 FLT4P35916 1363 aa5.78□□□□□ -1.48
SSR3-204ENST00000467733 KIF24Q5T7B8 1368 aa5.78□□□□□ -1.48
SSR3-204ENST00000467733 ADAMTSL1Q8N6G6 1762 aa5.78□□□□□ -1.48
SSR3-204ENST00000467733 ANKRD31Q8N7Z5 1873 aa5.77□□□□□ -1.49
SSR3-204ENST00000467733 CHRNA5P30532 468 aa5.77□□□□□ -1.49
SSR3-204ENST00000467733 LIG3P49916 1009 aa5.77□□□□□ -1.49
SSR3-204ENST00000467733 LBX1P52954 281 aa5.77□□□□□ -1.49
SSR3-204ENST00000467733 YARSP54577 528 aaKnown RBP5.77□□□□□ -1.49
SSR3-204ENST00000467733 RPL6Q02878 288 aaKnown RBP5.77□□□□□ -1.49
SSR3-204ENST00000467733 PPP1R13LQ8WUF5 828 aa5.77□□□□□ -1.49
SSR3-204ENST00000467733 SIGLEC10Q96LC7 697 aa5.77□□□□□ -1.49
SSR3-204ENST00000467733 SLC12A5Q9H2X9 1139 aa5.77□□□□□ -1.49
SSR3-204ENST00000467733 ASAP1Q9ULH1 1129 aa5.77□□□□□ -1.49
SSR3-204ENST00000467733 IRAK3Q9Y616 596 aa5.77□□□□□ -1.49
SSR3-204ENST00000467733 TRPM7Q96QT4 1865 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms