RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 NSUN6Q8TEA1 469 aaKnown RBP7.8□□□□□ -1.16
SCAF4-204ENST00000467731 ARID3AQ99856 593 aa7.8□□□□□ -1.16
SCAF4-204ENST00000467731 POLR3EQ9NVU0 708 aa7.8□□□□□ -1.16
SCAF4-204ENST00000467731 CFAP45Q9UL16 551 aa7.8□□□□□ -1.16
SCAF4-204ENST00000467731 ALDH5A1P51649 535 aaPredicted RBP7.79□□□□□ -1.16
SCAF4-204ENST00000467731 USP11P51784 963 aa7.79□□□□□ -1.16
SCAF4-204ENST00000467731 LACTBP83111 547 aaPredicted RBP7.79□□□□□ -1.16
SCAF4-204ENST00000467731 SP3Q02447 781 aa7.79□□□□□ -1.16
SCAF4-204ENST00000467731 DMTNQ08495 405 aa7.79□□□□□ -1.16
SCAF4-204ENST00000467731 ZNF174Q15697 407 aa7.79□□□□□ -1.16
SCAF4-204ENST00000467731 ANO1Q5XXA6 986 aa7.79□□□□□ -1.16
SCAF4-204ENST00000467731 ATL3Q6DD88 541 aa7.79□□□□□ -1.16
SCAF4-204ENST00000467731 CLEC17AQ6ZS10 378 aa7.79□□□□□ -1.16
SCAF4-204ENST00000467731 PDCD2LQ9BRP1 358 aa7.79□□□□□ -1.16
SCAF4-204ENST00000467731 ARHGAP39Q9C0H5 1083 aa7.79□□□□□ -1.16
SCAF4-204ENST00000467731 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.79□□□□□ -1.16
SCAF4-204ENST00000467731 DNAH12Q6ZR08 3092 aa7.79□□□□□ -1.16
SCAF4-204ENST00000467731 SOWAHBA6NEL2 793 aa7.79□□□□□ -1.16
SCAF4-204ENST00000467731 FAM86B1E9PN63 330 aa7.79□□□□□ -1.16
SCAF4-204ENST00000467731 TNPO2O14787 897 aaKnown RBP7.79□□□□□ -1.16
SCAF4-204ENST00000467731 COBLO75128 1261 aa7.79□□□□□ -1.16
SCAF4-204ENST00000467731 FAM86B2P0C5J1 330 aa7.79□□□□□ -1.16
SCAF4-204ENST00000467731 PTMSP20962 102 aa7.79□□□□□ -1.16
SCAF4-204ENST00000467731 PSMC4P43686 418 aa7.79□□□□□ -1.16
SCAF4-204ENST00000467731 CAP1Q01518 475 aa7.79□□□□□ -1.16
SCAF4-204ENST00000467731 PPP4R3AQ6IN85 833 aa7.79□□□□□ -1.16
SCAF4-204ENST00000467731 DPP9Q86TI2 863 aa7.79□□□□□ -1.16
SCAF4-204ENST00000467731 LINC00301Q8NCQ3 95 aa7.79□□□□□ -1.16
SCAF4-204ENST00000467731 CYP2W1Q8TAV3 490 aa7.79□□□□□ -1.16
SCAF4-204ENST00000467731 FGD4Q96M96 766 aa7.79□□□□□ -1.16
SCAF4-204ENST00000467731 SAGE1Q9NXZ1 904 aa7.79□□□□□ -1.16
SCAF4-204ENST00000467731 RTEL1Q9NZ71 1219 aa7.79□□□□□ -1.16
SCAF4-204ENST00000467731 ADD3Q9UEY8 706 aaKnown RBP7.79□□□□□ -1.16
SCAF4-204ENST00000467731 TSKSQ9UJT2 592 aa7.79□□□□□ -1.16
SCAF4-204ENST00000467731 DOCK5Q9H7D0 1870 aa7.78□□□□□ -1.16
SCAF4-204ENST00000467731 SLC37A4O43826 429 aa7.78□□□□□ -1.16
SCAF4-204ENST00000467731 KIF20AO95235 890 aa7.78□□□□□ -1.16
SCAF4-204ENST00000467731 NR3C2P08235 984 aa7.78□□□□□ -1.16
SCAF4-204ENST00000467731 CYP3A4P08684 503 aa7.78□□□□□ -1.16
SCAF4-204ENST00000467731 MYCLP12524 364 aaPredicted RBP7.78□□□□□ -1.16
SCAF4-204ENST00000467731 NASPP49321 788 aaPredicted RBP7.78□□□□□ -1.16
SCAF4-204ENST00000467731 MRPS9P82933 396 aaKnown RBP7.78□□□□□ -1.16
SCAF4-204ENST00000467731 PTPAQ15257 358 aa7.78□□□□□ -1.16
SCAF4-204ENST00000467731 NFKBIBQ15653 356 aa7.78□□□□□ -1.16
SCAF4-204ENST00000467731 ZNF792Q3KQV3 632 aa7.78□□□□□ -1.16
SCAF4-204ENST00000467731 MORN1Q5T089 497 aa7.78□□□□□ -1.16
SCAF4-204ENST00000467731 AXDND1Q5T1B0 1012 aaPredicted RBP7.78□□□□□ -1.16
SCAF4-204ENST00000467731 PCNX4Q63HM2 1172 aa7.78□□□□□ -1.16
SCAF4-204ENST00000467731 POTEDQ86YR6 584 aa7.78□□□□□ -1.16
SCAF4-204ENST00000467731 TRIM47Q96LD4 638 aa7.78□□□□□ -1.16
SCAF4-204ENST00000467731 SPATA32Q96LK8 384 aa7.78□□□□□ -1.16
SCAF4-204ENST00000467731 GBP4Q96PP9 640 aa7.78□□□□□ -1.16
SCAF4-204ENST00000467731 BEGAINQ9BUH8 593 aa7.78□□□□□ -1.16
SCAF4-204ENST00000467731 DDX25Q9UHL0 483 aaKnown RBP7.78□□□□□ -1.16
SCAF4-204ENST00000467731 MRVI1Q9Y6F6 885 aa7.78□□□□□ -1.16
SCAF4-204ENST00000467731 CASP8AP2Q9UKL3 1982 aa7.78□□□□□ -1.16
SCAF4-204ENST00000467731 SLC15A5A6NIM6 579 aa7.78□□□□□ -1.16
SCAF4-204ENST00000467731 GPR25O00155 361 aa7.78□□□□□ -1.16
SCAF4-204ENST00000467731 NEMFO60524 1076 aa7.78□□□□□ -1.16
SCAF4-204ENST00000467731 CLSTN1O94985 981 aa7.78□□□□□ -1.16
SCAF4-204ENST00000467731 MARCKSP29966 332 aaPredicted RBP7.78□□□□□ -1.16
SCAF4-204ENST00000467731 CIITAP33076 1130 aa7.78□□□□□ -1.16
SCAF4-204ENST00000467731 ZNF76P36508 570 aa7.78□□□□□ -1.16
SCAF4-204ENST00000467731 PTGDRQ13258 359 aa7.78□□□□□ -1.16
SCAF4-204ENST00000467731 CEP55Q53EZ4 464 aa7.78□□□□□ -1.16
SCAF4-204ENST00000467731 PRR16Q569H4 304 aa7.78□□□□□ -1.16
SCAF4-204ENST00000467731 TAF3Q5VWG9 929 aa7.78□□□□□ -1.16
SCAF4-204ENST00000467731 MOXD1Q6UVY6 613 aa7.78□□□□□ -1.16
SCAF4-204ENST00000467731 VSIG10LQ86VR7 867 aa7.78□□□□□ -1.16
SCAF4-204ENST00000467731 NUDT12Q9BQG2 462 aa7.78□□□□□ -1.16
SCAF4-204ENST00000467731 SCAND2PQ9GZW5 306 aaPredicted RBP7.78□□□□□ -1.16
SCAF4-204ENST00000467731 IGLV3-22A0A075B6J6 115 aa7.77□□□□□ -1.16
SCAF4-204ENST00000467731 CYP3A7-CYP3A51PA0A087WV96 503 aa7.77□□□□□ -1.16
SCAF4-204ENST00000467731 YEATS4O95619 227 aa7.77□□□□□ -1.16
SCAF4-204ENST00000467731 GCFC2P16383 781 aaKnown RBP7.77□□□□□ -1.16
SCAF4-204ENST00000467731 CYP3A7P24462 503 aa7.77□□□□□ -1.16
SCAF4-204ENST00000467731 CCND2P30279 289 aa7.77□□□□□ -1.16
SCAF4-204ENST00000467731 FCGRTP55899 365 aa7.77□□□□□ -1.16
SCAF4-204ENST00000467731 SLC39A14Q15043 492 aa7.77□□□□□ -1.16
SCAF4-204ENST00000467731 STK38Q15208 465 aa7.77□□□□□ -1.16
SCAF4-204ENST00000467731 TMEM132AQ24JP5 1023 aa7.77□□□□□ -1.16
SCAF4-204ENST00000467731 LEO1Q8WVC0 666 aaPredicted RBP7.77□□□□□ -1.16
SCAF4-204ENST00000467731 LENG9Q96B70 501 aa7.77□□□□□ -1.16
SCAF4-204ENST00000467731 IWS1Q96ST2 819 aa7.77□□□□□ -1.16
SCAF4-204ENST00000467731 TMEM60Q9H2L4 133 aa7.77□□□□□ -1.16
SCAF4-204ENST00000467731 WBP1LQ9NX94 342 aa7.77□□□□□ -1.16
SCAF4-204ENST00000467731 GJD2Q9UKL4 321 aa7.77□□□□□ -1.16
SCAF4-204ENST00000467731 CEP131Q9UPN4 1083 aa7.77□□□□□ -1.16
SCAF4-204ENST00000467731 SPTLC2O15270 562 aa7.77□□□□□ -1.17
SCAF4-204ENST00000467731 ITGB5P18084 799 aa7.77□□□□□ -1.17
SCAF4-204ENST00000467731 EDNRBP24530 442 aa7.77□□□□□ -1.17
SCAF4-204ENST00000467731 ATP2C1P98194 919 aaPredicted RBP7.77□□□□□ -1.17
SCAF4-204ENST00000467731 MAP2K5Q13163 448 aa7.77□□□□□ -1.17
SCAF4-204ENST00000467731 ORC2Q13416 577 aaPredicted RBP7.77□□□□□ -1.17
SCAF4-204ENST00000467731 KIF22Q14807 665 aa7.77□□□□□ -1.17
SCAF4-204ENST00000467731 L1TD1Q5T7N2 865 aaKnown RBP7.77□□□□□ -1.17
SCAF4-204ENST00000467731 C4orf32Q8N8J7 132 aa7.77□□□□□ -1.17
SCAF4-204ENST00000467731 NPLOC4Q8TAT6 608 aa7.77□□□□□ -1.17
SCAF4-204ENST00000467731 CD99L2Q8TCZ2 262 aa7.77□□□□□ -1.17
SCAF4-204ENST00000467731 ZNF296Q8WUU4 475 aaPredicted RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms