RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 SLC12A7Q9Y666 1083 aa16.29■□□□□ 0.2
CCHCR1-211ENST00000467553 PRUNE2Q8WUY3 3088 aa16.28■□□□□ 0.2
CCHCR1-211ENST00000467553 SCN10AQ9Y5Y9 1956 aa16.28■□□□□ 0.2
CCHCR1-211ENST00000467553 A6NJR5 290 aa16.28■□□□□ 0.2
CCHCR1-211ENST00000467553 ZBTB5O15062 677 aa16.28■□□□□ 0.2
CCHCR1-211ENST00000467553 DDAH1O94760 285 aa16.28■□□□□ 0.2
CCHCR1-211ENST00000467553 KIF5BP33176 963 aa16.28■□□□□ 0.2
CCHCR1-211ENST00000467553 TRAF1Q13077 416 aa16.28■□□□□ 0.2
CCHCR1-211ENST00000467553 SLC35G1Q2M3R5 365 aa16.28■□□□□ 0.2
CCHCR1-211ENST00000467553 NSUN6Q8TEA1 469 aaKnown RBP16.28■□□□□ 0.2
CCHCR1-211ENST00000467553 KCNB2Q92953 911 aa16.28■□□□□ 0.2
CCHCR1-211ENST00000467553 MTMR8Q96EF0 704 aa16.28■□□□□ 0.2
CCHCR1-211ENST00000467553 JAKMIP1Q96N16 626 aaKnown RBP16.28■□□□□ 0.2
CCHCR1-211ENST00000467553 MAP3K14Q99558 947 aa16.28■□□□□ 0.2
CCHCR1-211ENST00000467553 CYTH3O43739 400 aa16.27■□□□□ 0.2
CCHCR1-211ENST00000467553 HMGB1P09429 215 aaKnown RBP16.27■□□□□ 0.2
CCHCR1-211ENST00000467553 CALM1P0DP23 149 aa16.27■□□□□ 0.2
CCHCR1-211ENST00000467553 CALM2P0DP24 149 aa16.27■□□□□ 0.2
CCHCR1-211ENST00000467553 CALM3P0DP25 149 aa16.27■□□□□ 0.2
CCHCR1-211ENST00000467553 ACRP10323 421 aa16.27■□□□□ 0.2
CCHCR1-211ENST00000467553 TXNP10599 105 aaKnown RBP16.27■□□□□ 0.2
CCHCR1-211ENST00000467553 CPA1P15085 419 aa16.27■□□□□ 0.2
CCHCR1-211ENST00000467553 RFC2P35250 354 aa16.27■□□□□ 0.2
CCHCR1-211ENST00000467553 FGD1P98174 961 aa16.27■□□□□ 0.2
CCHCR1-211ENST00000467553 PBX4Q9BYU1 374 aa16.27■□□□□ 0.2
CCHCR1-211ENST00000467553 TRPV6Q9H1D0 765 aa16.27■□□□□ 0.2
CCHCR1-211ENST00000467553 PCDHA1Q9Y5I3 950 aa16.27■□□□□ 0.2
CCHCR1-211ENST00000467553 VCANP13611 3396 aa16.26■□□□□ 0.19
CCHCR1-211ENST00000467553 PNMA6FA0A0J9YX94 578 aa16.26■□□□□ 0.19
CCHCR1-211ENST00000467553 PITPNM1O00562 1244 aa16.26■□□□□ 0.19
CCHCR1-211ENST00000467553 PPP1R11O60927 126 aaPredicted RBP16.26■□□□□ 0.19
CCHCR1-211ENST00000467553 CFBP00751 764 aa16.26■□□□□ 0.19
CCHCR1-211ENST00000467553 MYL3P08590 195 aa16.26■□□□□ 0.19
CCHCR1-211ENST00000467553 GNAQP50148 359 aa16.26■□□□□ 0.19
CCHCR1-211ENST00000467553 PSMC6P62333 389 aa16.26■□□□□ 0.19
CCHCR1-211ENST00000467553 GRIN2CQ14957 1233 aa16.26■□□□□ 0.19
CCHCR1-211ENST00000467553 STXBP2Q15833 593 aa16.26■□□□□ 0.19
CCHCR1-211ENST00000467553 TMEM63BQ5T3F8 832 aa16.26■□□□□ 0.19
CCHCR1-211ENST00000467553 BLOC1S2Q6QNY1 142 aa16.26■□□□□ 0.19
CCHCR1-211ENST00000467553 SGMS1Q86VZ5 419 aa16.26■□□□□ 0.19
CCHCR1-211ENST00000467553 CMTR1Q8N1G2 835 aaKnown RBP16.26■□□□□ 0.19
CCHCR1-211ENST00000467553 CCDC82Q8N4S0 544 aa16.26■□□□□ 0.19
CCHCR1-211ENST00000467553 FANCBQ8NB91 859 aa16.26■□□□□ 0.19
CCHCR1-211ENST00000467553 SYMPKQ92797 1274 aaKnown RBP16.26■□□□□ 0.19
CCHCR1-211ENST00000467553 GAS2L1Q99501 681 aaPredicted RBP16.26■□□□□ 0.19
CCHCR1-211ENST00000467553 USP26Q9BXU7 913 aa16.26■□□□□ 0.19
CCHCR1-211ENST00000467553 NAP1L2Q9ULW6 460 aaPredicted RBP16.26■□□□□ 0.19
CCHCR1-211ENST00000467553 PLEKHA8P1O95397 391 aa16.25■□□□□ 0.19
CCHCR1-211ENST00000467553 CCL23P55773 120 aa16.25■□□□□ 0.19
CCHCR1-211ENST00000467553 MICU3Q86XE3 530 aa16.25■□□□□ 0.19
CCHCR1-211ENST00000467553 SRBD1Q8N5C6 995 aaKnown RBP16.25■□□□□ 0.19
CCHCR1-211ENST00000467553 TAAR1Q96RJ0 339 aa16.25■□□□□ 0.19
CCHCR1-211ENST00000467553 LZTS2Q9BRK4 669 aa16.25■□□□□ 0.19
CCHCR1-211ENST00000467553 COL25A1Q9BXS0 654 aaPredicted RBP16.25■□□□□ 0.19
CCHCR1-211ENST00000467553 KIAA1217Q5T5P2 1943 aa16.25■□□□□ 0.19
CCHCR1-211ENST00000467553 EIF3JO75822 258 aaKnown RBP16.24■□□□□ 0.19
CCHCR1-211ENST00000467553 GH1P01241 217 aa16.24■□□□□ 0.19
CCHCR1-211ENST00000467553 ACTN1P12814 892 aa16.24■□□□□ 0.19
CCHCR1-211ENST00000467553 PSMA5P28066 241 aa16.24■□□□□ 0.19
CCHCR1-211ENST00000467553 GHRHRQ02643 423 aa16.24■□□□□ 0.19
CCHCR1-211ENST00000467553 BFSP2Q13515 415 aa16.24■□□□□ 0.19
CCHCR1-211ENST00000467553 NBPF20Q3BBV1 942 aa16.24■□□□□ 0.19
CCHCR1-211ENST00000467553 CCDC62Q6P9F0 684 aa16.24■□□□□ 0.19
CCHCR1-211ENST00000467553 Q6ZUG5 572 aa16.24■□□□□ 0.19
CCHCR1-211ENST00000467553 RETREG2Q8NC44 543 aa16.24■□□□□ 0.19
CCHCR1-211ENST00000467553 SYTL5Q8TDW5 730 aaPredicted RBP16.24■□□□□ 0.19
CCHCR1-211ENST00000467553 RRP36Q96EU6 259 aaKnown RBP16.24■□□□□ 0.19
CCHCR1-211ENST00000467553 RMDN3Q96TC7 470 aa16.24■□□□□ 0.19
CCHCR1-211ENST00000467553 SPZ1Q9BXG8 430 aa16.24■□□□□ 0.19
CCHCR1-211ENST00000467553 WNT8AQ9H1J5 351 aa16.24■□□□□ 0.19
CCHCR1-211ENST00000467553 BRPF3Q9ULD4 1205 aa16.24■□□□□ 0.19
CCHCR1-211ENST00000467553 SLC4A7Q9Y6M7 1214 aa16.24■□□□□ 0.19
CCHCR1-211ENST00000467553 CHD9Q3L8U1 2897 aa16.24■□□□□ 0.19
CCHCR1-211ENST00000467553 UMODL1Q5DID0 1318 aa16.23■□□□□ 0.19
CCHCR1-211ENST00000467553 SPTBN5Q9NRC6 3674 aaKnown RBP16.23■□□□□ 0.19
CCHCR1-211ENST00000467553 KLF18A0A0U1RQI7 1052 aa16.23■□□□□ 0.19
CCHCR1-211ENST00000467553 ZBTB43O43298 467 aa16.23■□□□□ 0.19
CCHCR1-211ENST00000467553 EPB41L2O43491 1005 aaKnown RBP16.23■□□□□ 0.19
CCHCR1-211ENST00000467553 PARNO95453 639 aaKnown RBP16.23■□□□□ 0.19
CCHCR1-211ENST00000467553 CASTP20810 708 aaKnown RBP16.23■□□□□ 0.19
CCHCR1-211ENST00000467553 PTGS1P23219 599 aa16.23■□□□□ 0.19
CCHCR1-211ENST00000467553 SMARCA1P28370 1054 aa16.23■□□□□ 0.19
CCHCR1-211ENST00000467553 KCNV1Q6PIU1 500 aa16.23■□□□□ 0.19
CCHCR1-211ENST00000467553 APOA5Q6Q788 366 aa16.23■□□□□ 0.19
CCHCR1-211ENST00000467553 OTOP2Q7RTS6 562 aa16.23■□□□□ 0.19
CCHCR1-211ENST00000467553 SESTD1Q86VW0 696 aa16.23■□□□□ 0.19
CCHCR1-211ENST00000467553 CCDC155Q8N6L0 562 aa16.23■□□□□ 0.19
CCHCR1-211ENST00000467553 PHOSPHO2Q8TCD6 241 aa16.23■□□□□ 0.19
CCHCR1-211ENST00000467553 EMID1Q96A84 441 aaPredicted RBP16.23■□□□□ 0.19
CCHCR1-211ENST00000467553 SLC28A3Q9HAS3 691 aa16.23■□□□□ 0.19
CCHCR1-211ENST00000467553 TRMT13Q9NUP7 481 aaKnown RBP16.23■□□□□ 0.19
CCHCR1-211ENST00000467553 SEC63Q9UGP8 760 aaKnown RBP16.23■□□□□ 0.19
CCHCR1-211ENST00000467553 PCDHA11Q9Y5I1 949 aa16.23■□□□□ 0.19
CCHCR1-211ENST00000467553 MYO9BQ13459 2157 aa16.23■□□□□ 0.19
CCHCR1-211ENST00000467553 RPS6KB1P23443 525 aa16.22■□□□□ 0.19
CCHCR1-211ENST00000467553 APOBRQ0VD83 1088 aa16.22■□□□□ 0.19
CCHCR1-211ENST00000467553 FAM47CQ5HY64 1035 aa16.22■□□□□ 0.19
CCHCR1-211ENST00000467553 ARHGEF16Q5VV41 709 aa16.22■□□□□ 0.19
CCHCR1-211ENST00000467553 CAGE1Q8TC20 777 aa16.22■□□□□ 0.19
CCHCR1-211ENST00000467553 KATNAL1Q9BW62 490 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms