RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 NPM3O75607 178 aaKnown RBP16.41■□□□□ 0.22
PRPF38B-204ENST00000467302 AARSP49588 968 aaKnown RBP eCLIP16.41■□□□□ 0.223e-6■■■□□ 16.5
PRPF38B-204ENST00000467302 NFIAQ12857 509 aa16.41■□□□□ 0.22
PRPF38B-204ENST00000467302 STK4Q13043 487 aa16.41■□□□□ 0.22
PRPF38B-204ENST00000467302 COBLL1Q53SF7 1204 aa16.41■□□□□ 0.22
PRPF38B-204ENST00000467302 FIGNQ5HY92 759 aa16.41■□□□□ 0.22
PRPF38B-204ENST00000467302 KIAA1328Q86T90 577 aa16.41■□□□□ 0.22
PRPF38B-204ENST00000467302 CABP7Q86V35 215 aa16.41■□□□□ 0.22
PRPF38B-204ENST00000467302 CNOT6LQ96LI5 555 aaKnown RBP16.41■□□□□ 0.22
PRPF38B-204ENST00000467302 ERGIC2Q96RQ1 377 aa16.41■□□□□ 0.22
PRPF38B-204ENST00000467302 IDI2Q9BXS1 227 aa16.41■□□□□ 0.22
PRPF38B-204ENST00000467302 DHX36Q9H2U1 1008 aaKnown RBP16.41■□□□□ 0.22
PRPF38B-204ENST00000467302 CPVLQ9H3G5 476 aa16.41■□□□□ 0.22
PRPF38B-204ENST00000467302 ANO9A1A5B4 782 aa16.4■□□□□ 0.22
PRPF38B-204ENST00000467302 PPIP5K2O43314 1243 aa16.4■□□□□ 0.22
PRPF38B-204ENST00000467302 RPS6KA5O75582 802 aa16.4■□□□□ 0.22
PRPF38B-204ENST00000467302 OR52Z1P0C646 297 aa16.4■□□□□ 0.22
PRPF38B-204ENST00000467302 MCM3P25205 808 aa16.4■□□□□ 0.22
PRPF38B-204ENST00000467302 SHMT1P34896 483 aa16.4■□□□□ 0.22
PRPF38B-204ENST00000467302 TTLL6Q8N841 843 aa16.4■□□□□ 0.22
PRPF38B-204ENST00000467302 VAT1LQ9HCJ6 419 aa16.4■□□□□ 0.22
PRPF38B-204ENST00000467302 ZNHIT6Q9NWK9 470 aaKnown RBP16.4■□□□□ 0.22
PRPF38B-204ENST00000467302 C21orf2O43822 256 aa16.4■□□□□ 0.22
PRPF38B-204ENST00000467302 TTLL1O95922 423 aa16.4■□□□□ 0.22
PRPF38B-204ENST00000467302 PDHBP11177 359 aa16.4■□□□□ 0.22
PRPF38B-204ENST00000467302 PPP1R2P41236 205 aa16.4■□□□□ 0.22
PRPF38B-204ENST00000467302 CKAP4Q07065 602 aaKnown RBP16.4■□□□□ 0.22
PRPF38B-204ENST00000467302 PDE4DQ08499 809 aa16.4■□□□□ 0.22
PRPF38B-204ENST00000467302 HSP90B2PQ58FF3 399 aa16.4■□□□□ 0.22
PRPF38B-204ENST00000467302 DEFB132Q7Z7B7 95 aa16.4■□□□□ 0.22
PRPF38B-204ENST00000467302 FAM114A1Q8IWE2 563 aa16.4■□□□□ 0.22
PRPF38B-204ENST00000467302 RTKN2Q8IZC4 609 aa16.4■□□□□ 0.22
PRPF38B-204ENST00000467302 CCDC102AQ96A19 550 aa16.4■□□□□ 0.22
PRPF38B-204ENST00000467302 EEF2KMTQ96G04 330 aa16.4■□□□□ 0.22
PRPF38B-204ENST00000467302 ACBD3Q9H3P7 528 aa16.4■□□□□ 0.22
PRPF38B-204ENST00000467302 TMEM51Q9NW97 253 aa16.4■□□□□ 0.22
PRPF38B-204ENST00000467302 SEC63Q9UGP8 760 aaKnown RBP16.4■□□□□ 0.22
PRPF38B-204ENST00000467302 NAPAP54920 295 aa16.39■□□□□ 0.21
PRPF38B-204ENST00000467302 ASPRV1Q53RT3 343 aa16.39■□□□□ 0.21
PRPF38B-204ENST00000467302 KRT25Q7Z3Z0 450 aa16.39■□□□□ 0.21
PRPF38B-204ENST00000467302 ZFPM1Q8IX07 1006 aa16.39■□□□□ 0.21
PRPF38B-204ENST00000467302 LRRC47Q8N1G4 583 aaKnown RBP16.39■□□□□ 0.21
PRPF38B-204ENST00000467302 FBXO41Q8TF61 875 aa16.39■□□□□ 0.21
PRPF38B-204ENST00000467302 PSMD1Q99460 953 aa16.39■□□□□ 0.21
PRPF38B-204ENST00000467302 MMTAG2Q9BU76 263 aaKnown RBP16.39■□□□□ 0.21
PRPF38B-204ENST00000467302 PDGFDQ9GZP0 370 aaPredicted RBP16.39■□□□□ 0.21
PRPF38B-204ENST00000467302 CWC15Q9P013 229 aaKnown RBP16.39■□□□□ 0.21
PRPF38B-204ENST00000467302 PCDHAC2Q9Y5I4 1007 aa16.39■□□□□ 0.21
PRPF38B-204ENST00000467302 DUSP10Q9Y6W6 482 aa16.39■□□□□ 0.21
PRPF38B-204ENST00000467302 ZC3H4Q9UPT8 1303 aaKnown RBP16.39■□□□□ 0.21
PRPF38B-204ENST00000467302 NKRFO15226 690 aaKnown RBP eCLIP16.38■□□□□ 0.21
PRPF38B-204ENST00000467302 FCER1AP12319 257 aa16.38■□□□□ 0.21
PRPF38B-204ENST00000467302 HNRNPH3P31942 346 aaKnown RBP16.38■□□□□ 0.21
PRPF38B-204ENST00000467302 EIF6P56537 245 aaKnown RBP16.38■□□□□ 0.21
PRPF38B-204ENST00000467302 CCDC47Q96A33 483 aaKnown RBP16.38■□□□□ 0.21
PRPF38B-204ENST00000467302 ZBTB9Q96C00 473 aa16.38■□□□□ 0.21
PRPF38B-204ENST00000467302 CCDC17Q96LX7 622 aa16.38■□□□□ 0.21
PRPF38B-204ENST00000467302 NOC4LQ9BVI4 516 aaKnown RBP16.38■□□□□ 0.21
PRPF38B-204ENST00000467302 UBA5Q9GZZ9 404 aa16.38■□□□□ 0.21
PRPF38B-204ENST00000467302 RIOX1Q9H6W3 641 aa16.38■□□□□ 0.21
PRPF38B-204ENST00000467302 MYH4Q9Y623 1939 aa16.38■□□□□ 0.21
PRPF38B-204ENST00000467302 PDE2AO00408 941 aaPredicted RBP16.38■□□□□ 0.21
PRPF38B-204ENST00000467302 MPHOSPH10O00566 681 aaKnown RBP16.38■□□□□ 0.21
PRPF38B-204ENST00000467302 ZNF263O14978 683 aa16.38■□□□□ 0.21
PRPF38B-204ENST00000467302 CCNT1O60563 726 aaKnown RBP16.38■□□□□ 0.21
PRPF38B-204ENST00000467302 SYF2O95926 243 aaKnown RBP16.38■□□□□ 0.21
PRPF38B-204ENST00000467302 COL2A1P02458 1487 aaPredicted RBP16.38■□□□□ 0.21
PRPF38B-204ENST00000467302 VAV2P52735 878 aa16.38■□□□□ 0.21
PRPF38B-204ENST00000467302 CACNB3P54284 484 aa16.38■□□□□ 0.21
PRPF38B-204ENST00000467302 ASIC1P78348 528 aa16.38■□□□□ 0.21
PRPF38B-204ENST00000467302 SLC20A2Q08357 652 aa16.38■□□□□ 0.21
PRPF38B-204ENST00000467302 TCP10Q12799 353 aa16.38■□□□□ 0.21
PRPF38B-204ENST00000467302 NONOQ15233 471 aaKnown RBP eCLIP16.38■□□□□ 0.21
PRPF38B-204ENST00000467302 MAP9Q49MG5 647 aa16.38■□□□□ 0.21
PRPF38B-204ENST00000467302 KIAA0895Q8NCT3 520 aa16.38■□□□□ 0.21
PRPF38B-204ENST00000467302 IQCDQ96DY2 449 aa16.38■□□□□ 0.21
PRPF38B-204ENST00000467302 PIGSQ96S52 555 aa16.38■□□□□ 0.21
PRPF38B-204ENST00000467302 C6orf50Q9HD87 102 aa16.38■□□□□ 0.21
PRPF38B-204ENST00000467302 HPCAL4Q9UM19 191 aa16.38■□□□□ 0.21
PRPF38B-204ENST00000467302 FRMPD2Q68DX3 1309 aaPredicted RBP16.37■□□□□ 0.21
PRPF38B-204ENST00000467302 SMCO2A6NFE2 343 aa16.37■□□□□ 0.21
PRPF38B-204ENST00000467302 hCG_1984214I3L0E3 225 aa16.37■□□□□ 0.21
PRPF38B-204ENST00000467302 IPO7O95373 1038 aaKnown RBP16.37■□□□□ 0.21
PRPF38B-204ENST00000467302 SNHG28P0DPA3 235 aa16.37■□□□□ 0.21
PRPF38B-204ENST00000467302 GNA11P29992 359 aa16.37■□□□□ 0.21
PRPF38B-204ENST00000467302 MTIF2P46199 727 aaKnown RBP16.37■□□□□ 0.21
PRPF38B-204ENST00000467302 LETM2Q2VYF4 491 aa16.37■□□□□ 0.21
PRPF38B-204ENST00000467302 SOGA3Q5TF21 947 aa16.37■□□□□ 0.21
PRPF38B-204ENST00000467302 CENPPQ6IPU0 288 aa16.37■□□□□ 0.21
PRPF38B-204ENST00000467302 ZNF713Q8N859 430 aaPredicted RBP16.37■□□□□ 0.21
PRPF38B-204ENST00000467302 CAPZA3Q96KX2 299 aa16.37■□□□□ 0.21
PRPF38B-204ENST00000467302 TRERF1Q96PN7 1200 aa16.37■□□□□ 0.21
PRPF38B-204ENST00000467302 TSGA10Q9BZW7 698 aa16.37■□□□□ 0.21
PRPF38B-204ENST00000467302 SEMA6BQ9H3T3 888 aa16.37■□□□□ 0.21
PRPF38B-204ENST00000467302 PI4KBQ9UBF8 816 aa16.37■□□□□ 0.21
PRPF38B-204ENST00000467302 FAM198AQ9UFP1 575 aa16.37■□□□□ 0.21
PRPF38B-204ENST00000467302 YDJCA8MPS7 323 aa16.36■□□□□ 0.21
PRPF38B-204ENST00000467302 PRPF6O94906 941 aaKnown RBP16.36■□□□□ 0.21
PRPF38B-204ENST00000467302 AMPD3Q01432 767 aa16.36■□□□□ 0.21
PRPF38B-204ENST00000467302 CYP27A1Q02318 531 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms