RNA–Protein interactions for RNA: ENST00000467259.1

GABBR1-207, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 2

Gene GABBR1, Length 1,252 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-207ENST00000467259 RRP36Q96EU6 259 aaKnown RBP27.7■■■□□ 2.02
GABBR1-207ENST00000467259 NEK1Q96PY6 1258 aa27.7■■■□□ 2.02
GABBR1-207ENST00000467259 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.7■■■□□ 2.02
GABBR1-207ENST00000467259 HIPK3Q9H422 1215 aa27.7■■■□□ 2.02
GABBR1-207ENST00000467259 DDX41Q9UJV9 622 aaKnown RBP27.7■■■□□ 2.02
GABBR1-207ENST00000467259 SLC12A7Q9Y666 1083 aa27.7■■■□□ 2.02
GABBR1-207ENST00000467259 MRVI1Q9Y6F6 885 aa27.7■■■□□ 2.02
GABBR1-207ENST00000467259 TRIP12Q14669 1992 aaPredicted RBP27.69■■■□□ 2.02
GABBR1-207ENST00000467259 hCG_1642624A0A1W2PR95 340 aa27.69■■■□□ 2.02
GABBR1-207ENST00000467259 SORBS3O60504 671 aa27.69■■■□□ 2.02
GABBR1-207ENST00000467259 MMP3P08254 477 aa27.69■■■□□ 2.02
GABBR1-207ENST00000467259 ACRP10323 421 aa27.69■■■□□ 2.02
GABBR1-207ENST00000467259 CHMP4BP1P59074 171 aa27.69■■■□□ 2.02
GABBR1-207ENST00000467259 TRAF1Q13077 416 aa27.69■■■□□ 2.02
GABBR1-207ENST00000467259 NBPF20Q3BBV1 942 aa27.69■■■□□ 2.02
GABBR1-207ENST00000467259 NOC4LQ9BVI4 516 aaKnown RBP27.69■■■□□ 2.02
GABBR1-207ENST00000467259 MAP3K20Q9NYL2 800 aaKnown RBP27.69■■■□□ 2.02
GABBR1-207ENST00000467259 TANC1Q9C0D5 1861 aa27.68■■■□□ 2.02
GABBR1-207ENST00000467259 PPIGQ13427 754 aaKnown RBP eCLIP27.68■■■□□ 2.02
GABBR1-207ENST00000467259 C16orf59Q7L2K0 433 aa27.68■■■□□ 2.02
GABBR1-207ENST00000467259 CCDC82Q8N4S0 544 aa27.68■■■□□ 2.02
GABBR1-207ENST00000467259 FAM161BQ96MY7 647 aa27.68■■■□□ 2.02
GABBR1-207ENST00000467259 SEC63Q9UGP8 760 aaKnown RBP27.68■■■□□ 2.02
GABBR1-207ENST00000467259 GBF1Q92538 1859 aa27.68■■■□□ 2.02
GABBR1-207ENST00000467259 CYP2C9P11712 490 aa27.67■■■□□ 2.02
GABBR1-207ENST00000467259 CCL23P55773 120 aa27.67■■■□□ 2.02
GABBR1-207ENST00000467259 VSIG10LQ86VR7 867 aa27.67■■■□□ 2.02
GABBR1-207ENST00000467259 SGMS1Q86VZ5 419 aa27.67■■■□□ 2.02
GABBR1-207ENST00000467259 TMEM199Q8N511 208 aa27.67■■■□□ 2.02
GABBR1-207ENST00000467259 SAMD3Q8N6K7 520 aa27.67■■■□□ 2.02
GABBR1-207ENST00000467259 GPKOWQ92917 476 aaPredicted RBP eCLIP27.67■■■□□ 2.02
GABBR1-207ENST00000467259 LZTS2Q9BRK4 669 aa27.67■■■□□ 2.02
GABBR1-207ENST00000467259 SEZ6LQ9BYH1 1024 aa27.67■■■□□ 2.02
GABBR1-207ENST00000467259 MTMR10Q9NXD2 777 aa27.67■■■□□ 2.02
GABBR1-207ENST00000467259 CALM1P0DP23 149 aa27.66■■■□□ 2.02
GABBR1-207ENST00000467259 CALM2P0DP24 149 aa27.66■■■□□ 2.02
GABBR1-207ENST00000467259 CALM3P0DP25 149 aa27.66■■■□□ 2.02
GABBR1-207ENST00000467259 CCND2P30279 289 aa27.66■■■□□ 2.02
GABBR1-207ENST00000467259 GNAQP50148 359 aa27.66■■■□□ 2.02
GABBR1-207ENST00000467259 EXOSC10Q01780 885 aaKnown RBP27.66■■■□□ 2.02
GABBR1-207ENST00000467259 TMTC3Q6ZXV5 915 aa27.66■■■□□ 2.02
GABBR1-207ENST00000467259 WNT8AQ9H1J5 351 aa27.66■■■□□ 2.02
GABBR1-207ENST00000467259 KPNA6O60684 536 aa27.65■■■□□ 2.02
GABBR1-207ENST00000467259 NEFLP07196 543 aa27.65■■■□□ 2.02
GABBR1-207ENST00000467259 SMARCA1P28370 1054 aa27.65■■■□□ 2.02
GABBR1-207ENST00000467259 TMEM240Q5SV17 173 aa27.65■■■□□ 2.02
GABBR1-207ENST00000467259 USP17L6PQ6QN14 398 aa27.65■■■□□ 2.02
GABBR1-207ENST00000467259 FANCBQ8NB91 859 aa27.65■■■□□ 2.02
GABBR1-207ENST00000467259 BRPF3Q9ULD4 1205 aa27.65■■■□□ 2.02
GABBR1-207ENST00000467259 CPA1P15085 419 aa27.64■■■□□ 2.02
GABBR1-207ENST00000467259 APOA5Q6Q788 366 aa27.64■■■□□ 2.02
GABBR1-207ENST00000467259 FRMPD4Q14CM0 1322 aa27.64■■■□□ 2.01
GABBR1-207ENST00000467259 UBA1P22314 1058 aaKnown RBP27.63■■■□□ 2.01
GABBR1-207ENST00000467259 SP2Q02086 613 aa27.63■■■□□ 2.01
GABBR1-207ENST00000467259 TSGA10IPQ3SY00 556 aa27.63■■■□□ 2.01
GABBR1-207ENST00000467259 FAM109BQ6ICB4 259 aaPredicted RBP27.63■■■□□ 2.01
GABBR1-207ENST00000467259 ZNF365Q70YC5 407 aa27.63■■■□□ 2.01
GABBR1-207ENST00000467259 DHX32Q7L7V1 743 aaKnown RBP27.63■■■□□ 2.01
GABBR1-207ENST00000467259 KAT2BQ92831 832 aa27.63■■■□□ 2.01
GABBR1-207ENST00000467259 SCLYQ96I15 445 aa27.63■■■□□ 2.01
GABBR1-207ENST00000467259 EYSQ5T1H1 3165 aa27.63■■■□□ 2.01
GABBR1-207ENST00000467259 ZNF286BP0CG31 522 aa27.62■■■□□ 2.01
GABBR1-207ENST00000467259 MRPS9P82933 396 aaKnown RBP27.62■■■□□ 2.01
GABBR1-207ENST00000467259 SMAD3P84022 425 aaKnown RBP27.62■■■□□ 2.01
GABBR1-207ENST00000467259 ZNF697Q5TEC3 545 aa27.62■■■□□ 2.01
GABBR1-207ENST00000467259 NFRKBQ6P4R8 1299 aa27.62■■■□□ 2.01
GABBR1-207ENST00000467259 DHX37Q8IY37 1157 aaKnown RBP27.62■■■□□ 2.01
GABBR1-207ENST00000467259 SMARCC2Q8TAQ2 1214 aa27.62■■■□□ 2.01
GABBR1-207ENST00000467259 EMID1Q96A84 441 aaPredicted RBP27.62■■■□□ 2.01
GABBR1-207ENST00000467259 IL23AQ9NPF7 189 aa27.62■■■□□ 2.01
GABBR1-207ENST00000467259 TET1Q8NFU7 2136 aa27.61■■■□□ 2.01
GABBR1-207ENST00000467259 MEIS2O14770 477 aa27.61■■■□□ 2.01
GABBR1-207ENST00000467259 GGPS1O95749 300 aa27.61■■■□□ 2.01
GABBR1-207ENST00000467259 KRT32Q14532 448 aa27.61■■■□□ 2.01
GABBR1-207ENST00000467259 PSRC1Q6PGN9 363 aaPredicted RBP27.61■■■□□ 2.01
GABBR1-207ENST00000467259 SYNE3Q6ZMZ3 975 aa27.61■■■□□ 2.01
GABBR1-207ENST00000467259 GUCD1Q96NT3 240 aa27.61■■■□□ 2.01
GABBR1-207ENST00000467259 CNTNAP5Q8WYK1 1306 aa27.61■■■□□ 2.01
GABBR1-207ENST00000467259 SUPT20HL2P0C7V6 817 aa27.6■■■□□ 2.01
GABBR1-207ENST00000467259 CASTP20810 708 aaKnown RBP27.6■■■□□ 2.01
GABBR1-207ENST00000467259 LAMC2Q13753 1193 aa27.6■■■□□ 2.01
GABBR1-207ENST00000467259 DGKDQ16760 1214 aa27.6■■■□□ 2.01
GABBR1-207ENST00000467259 MYSM1Q5VVJ2 828 aa27.6■■■□□ 2.01
GABBR1-207ENST00000467259 PPTC7Q8NI37 304 aa27.6■■■□□ 2.01
GABBR1-207ENST00000467259 CUL5Q93034 780 aa27.6■■■□□ 2.01
GABBR1-207ENST00000467259 BCAS3Q9H6U6 928 aa27.6■■■□□ 2.01
GABBR1-207ENST00000467259 RTEL1Q9NZ71 1219 aa27.6■■■□□ 2.01
GABBR1-207ENST00000467259 MYO9BQ13459 2157 aa27.59■■■□□ 2.01
GABBR1-207ENST00000467259 KLF18A0A0U1RQI7 1052 aa27.59■■■□□ 2.01
GABBR1-207ENST00000467259 ZBTB43O43298 467 aa27.59■■■□□ 2.01
GABBR1-207ENST00000467259 UBE2SQ16763 222 aa27.59■■■□□ 2.01
GABBR1-207ENST00000467259 RTN1Q16799 776 aa27.59■■■□□ 2.01
GABBR1-207ENST00000467259 HSDL1Q3SXM5 330 aa27.59■■■□□ 2.01
GABBR1-207ENST00000467259 CELF3Q5SZQ8 465 aaKnown RBP27.59■■■□□ 2.01
GABBR1-207ENST00000467259 HEATR3Q7Z4Q2 680 aa27.59■■■□□ 2.01
GABBR1-207ENST00000467259 SPATA33Q96N06 139 aa27.59■■■□□ 2.01
GABBR1-207ENST00000467259 CHD9Q3L8U1 2897 aa27.59■■■□□ 2.01
GABBR1-207ENST00000467259 GRXCR1A8MXD5 290 aa27.58■■■□□ 2.01
GABBR1-207ENST00000467259 PIK3CDO00329 1044 aa27.58■■■□□ 2.01
GABBR1-207ENST00000467259 RASIP1Q5U651 963 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms