RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 TEX2Q8IWB9 1127 aa7.2□□□□□ -1.26
PRPF40A-205ENST00000467114 Q8N1Y9 231 aa7.2□□□□□ -1.26
PRPF40A-205ENST00000467114 DDX1Q92499 740 aaKnown RBP7.2□□□□□ -1.26
PRPF40A-205ENST00000467114 SEC14L1Q92503 715 aa7.2□□□□□ -1.26
PRPF40A-205ENST00000467114 ANAPC16Q96DE5 110 aa7.2□□□□□ -1.26
PRPF40A-205ENST00000467114 C11orf84Q9BUA3 381 aaPredicted RBP7.2□□□□□ -1.26
PRPF40A-205ENST00000467114 C22orf46C9J442 243 aa7.19□□□□□ -1.26
PRPF40A-205ENST00000467114 SMARCA5O60264 1052 aaPredicted RBP7.19□□□□□ -1.26
PRPF40A-205ENST00000467114 RPL13P26373 211 aaKnown RBP7.19□□□□□ -1.26
PRPF40A-205ENST00000467114 NAALADL2Q58DX5 795 aa7.19□□□□□ -1.26
PRPF40A-205ENST00000467114 E4F1Q66K89 784 aaPredicted RBP7.19□□□□□ -1.26
PRPF40A-205ENST00000467114 RIOX2Q8IUF8 465 aa7.19□□□□□ -1.26
PRPF40A-205ENST00000467114 KYQ8NBH2 561 aa7.19□□□□□ -1.26
PRPF40A-205ENST00000467114 ADAMTS17Q8TE56 1095 aa7.19□□□□□ -1.26
PRPF40A-205ENST00000467114 CAPN10Q9HC96 672 aa7.19□□□□□ -1.26
PRPF40A-205ENST00000467114 ITGB3P05106 788 aa7.18□□□□□ -1.26
PRPF40A-205ENST00000467114 THBS2P35442 1172 aa7.18□□□□□ -1.26
PRPF40A-205ENST00000467114 ZXDCQ2QGD7 858 aaPredicted RBP7.18□□□□□ -1.26
PRPF40A-205ENST00000467114 MCF2L2Q86YR7 1114 aa7.18□□□□□ -1.26
PRPF40A-205ENST00000467114 RBM15Q96T37 977 aaKnown RBP eCLIP7.18□□□□□ -1.26
PRPF40A-205ENST00000467114 LGR4Q9BXB1 951 aa7.18□□□□□ -1.26
PRPF40A-205ENST00000467114 TIMM13Q9Y5L4 95 aaPredicted RBP7.18□□□□□ -1.26
PRPF40A-205ENST00000467114 ARNTLO00327 626 aa7.17□□□□□ -1.26
PRPF40A-205ENST00000467114 SCG5P05408 212 aa7.17□□□□□ -1.26
PRPF40A-205ENST00000467114 RPL11P62913 178 aaKnown RBP7.17□□□□□ -1.26
PRPF40A-205ENST00000467114 MROH9Q5TGP6 573 aa7.17□□□□□ -1.26
PRPF40A-205ENST00000467114 FAM26EQ8N5C1 309 aa7.17□□□□□ -1.26
PRPF40A-205ENST00000467114 PPP1R14AQ96A00 147 aa7.17□□□□□ -1.26
PRPF40A-205ENST00000467114 SYT3Q9BQG1 590 aa7.17□□□□□ -1.26
PRPF40A-205ENST00000467114 BTG4Q9NY30 223 aa7.17□□□□□ -1.26
PRPF40A-205ENST00000467114 X6R8D5 127 aa7.17□□□□□ -1.26
PRPF40A-205ENST00000467114 FPR2P25090 351 aa7.16□□□□□ -1.26
PRPF40A-205ENST00000467114 HOXC12P31275 282 aa7.16□□□□□ -1.26
PRPF40A-205ENST00000467114 TESK1Q15569 626 aa7.16□□□□□ -1.26
PRPF40A-205ENST00000467114 ZNF827Q17R98 1081 aa7.16□□□□□ -1.26
PRPF40A-205ENST00000467114 FAM26FQ5R3K3 315 aa7.16□□□□□ -1.26
PRPF40A-205ENST00000467114 CD300LDQ6UXZ3 194 aa7.16□□□□□ -1.26
PRPF40A-205ENST00000467114 ZC3H18Q86VM9 953 aaKnown RBP7.16□□□□□ -1.26
PRPF40A-205ENST00000467114 CCDC103Q8IW40 242 aa7.16□□□□□ -1.26
PRPF40A-205ENST00000467114 FAM126BQ8IXS8 530 aa7.16□□□□□ -1.26
PRPF40A-205ENST00000467114 TTLL6Q8N841 843 aa7.16□□□□□ -1.26
PRPF40A-205ENST00000467114 BTN2A2Q8WVV5 523 aa7.16□□□□□ -1.26
PRPF40A-205ENST00000467114 TMEFF2Q9UIK5 374 aaPredicted RBP7.16□□□□□ -1.26
PRPF40A-205ENST00000467114 PALD1Q9ULE6 856 aa7.16□□□□□ -1.26
PRPF40A-205ENST00000467114 TBX1O43435 398 aa7.15□□□□□ -1.26
PRPF40A-205ENST00000467114 ITGAVP06756 1048 aa7.15□□□□□ -1.26
PRPF40A-205ENST00000467114 MAGEA10P43363 369 aaPredicted RBP7.15□□□□□ -1.26
PRPF40A-205ENST00000467114 GTF2A2P52657 109 aa7.15□□□□□ -1.26
PRPF40A-205ENST00000467114 ITGA1P56199 1179 aa7.15□□□□□ -1.26
PRPF40A-205ENST00000467114 RGL3Q3MIN7 710 aa7.15□□□□□ -1.26
PRPF40A-205ENST00000467114 PRR31Q5SQ13 230 aa7.15□□□□□ -1.26
PRPF40A-205ENST00000467114 C6orf15Q6UXA7 325 aaPredicted RBP7.15□□□□□ -1.26
PRPF40A-205ENST00000467114 MILR1Q7Z6M3 343 aa7.15□□□□□ -1.26
PRPF40A-205ENST00000467114 NLRP10Q86W26 655 aa7.15□□□□□ -1.26
PRPF40A-205ENST00000467114 KREMEN2Q8NCW0 462 aa7.15□□□□□ -1.26
PRPF40A-205ENST00000467114 DIO2Q92813 273 aa7.15□□□□□ -1.26
PRPF40A-205ENST00000467114 NGRNQ9NPE2 291 aaKnown RBP7.15□□□□□ -1.26
PRPF40A-205ENST00000467114 MYRFQ9Y2G1 1151 aa7.15□□□□□ -1.26
PRPF40A-205ENST00000467114 SMAD7O15105 426 aaKnown RBP7.14□□□□□ -1.27
PRPF40A-205ENST00000467114 KIAA2012Q0VF49 1180 aa7.14□□□□□ -1.27
PRPF40A-205ENST00000467114 KCNAB2Q13303 367 aa7.14□□□□□ -1.27
PRPF40A-205ENST00000467114 ACBD5Q5T8D3 534 aaPredicted RBP7.14□□□□□ -1.27
PRPF40A-205ENST00000467114 CEP68Q76N32 757 aa7.14□□□□□ -1.27
PRPF40A-205ENST00000467114 ZNF227Q86WZ6 799 aa7.14□□□□□ -1.27
PRPF40A-205ENST00000467114 FAM178BQ8IXR5 827 aa7.14□□□□□ -1.27
PRPF40A-205ENST00000467114 TRMT2BQ96GJ1 504 aaKnown RBP7.14□□□□□ -1.27
PRPF40A-205ENST00000467114 CCDC140Q96MF4 163 aa7.14□□□□□ -1.27
PRPF40A-205ENST00000467114 ACTR10Q9NZ32 417 aa7.14□□□□□ -1.27
PRPF40A-205ENST00000467114 MEFVO15553 781 aaPredicted RBP7.13□□□□□ -1.27
PRPF40A-205ENST00000467114 CPP00450 1065 aa7.13□□□□□ -1.27
PRPF40A-205ENST00000467114 BCL6P41182 706 aa7.13□□□□□ -1.27
PRPF40A-205ENST00000467114 ARID5AQ03989 594 aa7.13□□□□□ -1.27
PRPF40A-205ENST00000467114 CR1LQ2VPA4 569 aa7.13□□□□□ -1.27
PRPF40A-205ENST00000467114 TNNI3KQ59H18 835 aa7.13□□□□□ -1.27
PRPF40A-205ENST00000467114 ZNF652Q9Y2D9 606 aa7.13□□□□□ -1.27
PRPF40A-205ENST00000467114 MYO1BO43795 1136 aa7.12□□□□□ -1.27
PRPF40A-205ENST00000467114 SUSD5O60279 629 aa7.12□□□□□ -1.27
PRPF40A-205ENST00000467114 PLATP00750 562 aa7.12□□□□□ -1.27
PRPF40A-205ENST00000467114 SNRPB2P08579 225 aaKnown RBP7.12□□□□□ -1.27
PRPF40A-205ENST00000467114 INSRRP14616 1297 aa7.12□□□□□ -1.27
PRPF40A-205ENST00000467114 ECI1P42126 302 aa7.12□□□□□ -1.27
PRPF40A-205ENST00000467114 ADAM17P78536 824 aa7.12□□□□□ -1.27
PRPF40A-205ENST00000467114 GNL2Q13823 731 aaKnown RBP7.12□□□□□ -1.27
PRPF40A-205ENST00000467114 SV2CQ496J9 727 aa7.12□□□□□ -1.27
PRPF40A-205ENST00000467114 TBC1D10BQ4KMP7 808 aaPredicted RBP7.12□□□□□ -1.27
PRPF40A-205ENST00000467114 STK32CQ86UX6 486 aa7.12□□□□□ -1.27
PRPF40A-205ENST00000467114 RCBTB1Q8NDN9 531 aa7.12□□□□□ -1.27
PRPF40A-205ENST00000467114 TMEM169Q96HH4 297 aa7.12□□□□□ -1.27
PRPF40A-205ENST00000467114 GPR20Q99678 358 aa7.12□□□□□ -1.27
PRPF40A-205ENST00000467114 SMPD4Q9NXE4 827 aa7.12□□□□□ -1.27
PRPF40A-205ENST00000467114 MRVI1Q9Y6F6 885 aa7.12□□□□□ -1.27
PRPF40A-205ENST00000467114 MROH6A6NGR9 719 aa7.11□□□□□ -1.27
PRPF40A-205ENST00000467114 B2RBV5 119 aa7.11□□□□□ -1.27
PRPF40A-205ENST00000467114 H7BY64 318 aa7.11□□□□□ -1.27
PRPF40A-205ENST00000467114 CAPNS1P04632 268 aa7.11□□□□□ -1.27
PRPF40A-205ENST00000467114 STAT5AP42229 794 aa7.11□□□□□ -1.27
PRPF40A-205ENST00000467114 SF1Q15637 639 aaKnown RBP7.11□□□□□ -1.27
PRPF40A-205ENST00000467114 LARP1BQ659C4 914 aaKnown RBP7.11□□□□□ -1.27
PRPF40A-205ENST00000467114 LGI4Q8N135 537 aa7.11□□□□□ -1.27
PRPF40A-205ENST00000467114 TXNDC5Q8NBS9 432 aaKnown RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms