RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 LHX8Q68G74 356 aa16.53■□□□□ 0.24
DNMT3A-208ENST00000466601 IQSEC1Q6DN90 963 aa16.53■□□□□ 0.24
DNMT3A-208ENST00000466601 XRRA1Q6P2D8 792 aa16.53■□□□□ 0.24
DNMT3A-208ENST00000466601 ZFP91Q96JP5 570 aaPredicted RBP16.53■□□□□ 0.24
DNMT3A-208ENST00000466601 C8orf76Q96K31 380 aa16.53■□□□□ 0.24
DNMT3A-208ENST00000466601 SMC3Q9UQE7 1217 aa16.53■□□□□ 0.24
DNMT3A-208ENST00000466601 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.52■□□□□ 0.24
DNMT3A-208ENST00000466601 POTEFA5A3E0 1075 aa16.52■□□□□ 0.24
DNMT3A-208ENST00000466601 M0R2N6 131 aa16.52■□□□□ 0.24
DNMT3A-208ENST00000466601 STAM2O75886 525 aa16.52■□□□□ 0.24
DNMT3A-208ENST00000466601 RARBP10826 455 aa16.52■□□□□ 0.24
DNMT3A-208ENST00000466601 GJB2P29033 226 aa16.52■□□□□ 0.24
DNMT3A-208ENST00000466601 MRPS9P82933 396 aaKnown RBP16.52■□□□□ 0.24
DNMT3A-208ENST00000466601 TNFAIP2Q03169 654 aa16.52■□□□□ 0.24
DNMT3A-208ENST00000466601 KRT40Q6A162 431 aa16.52■□□□□ 0.24
DNMT3A-208ENST00000466601 SEPT14Q6ZU15 432 aa16.52■□□□□ 0.24
DNMT3A-208ENST00000466601 U2AF1L4Q8WU68 220 aaKnown RBP16.52■□□□□ 0.24
DNMT3A-208ENST00000466601 RTEL1Q9NZ71 1219 aa16.52■□□□□ 0.24
DNMT3A-208ENST00000466601 KIF3AQ9Y496 699 aa16.52■□□□□ 0.24
DNMT3A-208ENST00000466601 LRRC37A2A6NM11 1700 aa16.51■□□□□ 0.23
DNMT3A-208ENST00000466601 RGS20O76081 388 aa16.51■□□□□ 0.23
DNMT3A-208ENST00000466601 TFRCP02786 760 aaKnown RBP16.51■□□□□ 0.23
DNMT3A-208ENST00000466601 MMP1P03956 469 aa16.51■□□□□ 0.23
DNMT3A-208ENST00000466601 SREBF1P36956 1147 aa16.51■□□□□ 0.23
DNMT3A-208ENST00000466601 GUCY1B3Q02153 619 aa16.51■□□□□ 0.23
DNMT3A-208ENST00000466601 SCFD2Q8WU76 684 aa16.51■□□□□ 0.23
DNMT3A-208ENST00000466601 WDR11Q9BZH6 1224 aa16.51■□□□□ 0.23
DNMT3A-208ENST00000466601 CRISPLD2Q9H0B8 497 aa16.51■□□□□ 0.23
DNMT3A-208ENST00000466601 BRMS1Q9HCU9 246 aa16.51■□□□□ 0.23
DNMT3A-208ENST00000466601 ADCY6O43306 1168 aa16.5■□□□□ 0.23
DNMT3A-208ENST00000466601 DUSP11O75319 330 aaKnown RBP16.5■□□□□ 0.23
DNMT3A-208ENST00000466601 TXNP10599 105 aaKnown RBP16.5■□□□□ 0.23
DNMT3A-208ENST00000466601 SMPD1P17405 629 aa16.5■□□□□ 0.23
DNMT3A-208ENST00000466601 KRT2P35908 639 aa16.5■□□□□ 0.23
DNMT3A-208ENST00000466601 SOX10P56693 466 aa16.5■□□□□ 0.23
DNMT3A-208ENST00000466601 ARHGAP4P98171 946 aa16.5■□□□□ 0.23
DNMT3A-208ENST00000466601 TTLL4Q14679 1199 aa16.5■□□□□ 0.23
DNMT3A-208ENST00000466601 GNPTABQ3T906 1256 aa16.5■□□□□ 0.23
DNMT3A-208ENST00000466601 OXER1Q8TDS5 423 aa16.5■□□□□ 0.23
DNMT3A-208ENST00000466601 LENG1Q96BZ8 264 aaPredicted RBP16.5■□□□□ 0.23
DNMT3A-208ENST00000466601 INTS4Q96HW7 963 aaKnown RBP16.5■□□□□ 0.23
DNMT3A-208ENST00000466601 INPP4AQ96PE3 977 aaPredicted RBP16.5■□□□□ 0.23
DNMT3A-208ENST00000466601 OGDHLQ9ULD0 1010 aa16.5■□□□□ 0.23
DNMT3A-208ENST00000466601 GNEQ9Y223 722 aaKnown RBP16.5■□□□□ 0.23
DNMT3A-208ENST00000466601 CENPFP49454 3210 aa16.5■□□□□ 0.23
DNMT3A-208ENST00000466601 ARIH2O95376 493 aa16.49■□□□□ 0.23
DNMT3A-208ENST00000466601 CYP3A4P08684 503 aa16.49■□□□□ 0.23
DNMT3A-208ENST00000466601 CAPN2P17655 700 aa16.49■□□□□ 0.23
DNMT3A-208ENST00000466601 EN2P19622 333 aaPredicted RBP16.49■□□□□ 0.23
DNMT3A-208ENST00000466601 SAFBQ15424 915 aaKnown RBP eCLIP16.49■□□□□ 0.23
DNMT3A-208ENST00000466601 DUSP28Q4G0W2 176 aa16.49■□□□□ 0.23
DNMT3A-208ENST00000466601 TMEM63BQ5T3F8 832 aa16.49■□□□□ 0.23
DNMT3A-208ENST00000466601 CCDC62Q6P9F0 684 aa16.49■□□□□ 0.23
DNMT3A-208ENST00000466601 KCNV1Q6PIU1 500 aa16.49■□□□□ 0.23
DNMT3A-208ENST00000466601 KRT25Q7Z3Z0 450 aa16.49■□□□□ 0.23
DNMT3A-208ENST00000466601 NLRX1Q86UT6 975 aa16.49■□□□□ 0.23
DNMT3A-208ENST00000466601 DIS3L2Q8IYB7 885 aaKnown RBP16.49■□□□□ 0.23
DNMT3A-208ENST00000466601 FBXO18Q8NFZ0 1043 aa16.49■□□□□ 0.23
DNMT3A-208ENST00000466601 CRYGNQ8WXF5 182 aa16.49■□□□□ 0.23
DNMT3A-208ENST00000466601 XPNPEP3Q9NQH7 507 aa16.49■□□□□ 0.23
DNMT3A-208ENST00000466601 UBIAD1Q9Y5Z9 338 aa16.49■□□□□ 0.23
DNMT3A-208ENST00000466601 MRVI1Q9Y6F6 885 aa16.49■□□□□ 0.23
DNMT3A-208ENST00000466601 CCDC194A0A1B0GVG4 234 aa16.48■□□□□ 0.23
DNMT3A-208ENST00000466601 BTBD18B2RXH4 712 aa16.48■□□□□ 0.23
DNMT3A-208ENST00000466601 NKRFO15226 690 aaKnown RBP eCLIP16.48■□□□□ 0.23
DNMT3A-208ENST00000466601 PGK1P00558 417 aa16.48■□□□□ 0.23
DNMT3A-208ENST00000466601 ITGB5P18084 799 aa16.48■□□□□ 0.23
DNMT3A-208ENST00000466601 ICAM3P32942 547 aa16.48■□□□□ 0.23
DNMT3A-208ENST00000466601 ZNF76P36508 570 aa16.48■□□□□ 0.23
DNMT3A-208ENST00000466601 NR5A1Q13285 461 aa16.48■□□□□ 0.23
DNMT3A-208ENST00000466601 NONOQ15233 471 aaKnown RBP eCLIP16.48■□□□□ 0.23
DNMT3A-208ENST00000466601 LY6KQ17RY6 165 aa16.48■□□□□ 0.23
DNMT3A-208ENST00000466601 GJC2Q5T442 439 aaPredicted RBP16.48■□□□□ 0.23
DNMT3A-208ENST00000466601 TBCKQ8TEA7 893 aa16.48■□□□□ 0.23
DNMT3A-208ENST00000466601 MXRA8Q9BRK3 442 aa16.48■□□□□ 0.23
DNMT3A-208ENST00000466601 JADE2Q9NQC1 790 aa16.48■□□□□ 0.23
DNMT3A-208ENST00000466601 DDX41Q9UJV9 622 aaKnown RBP16.48■□□□□ 0.23
DNMT3A-208ENST00000466601 Q9Y3F1 56 aa16.48■□□□□ 0.23
DNMT3A-208ENST00000466601 SPATA31C2B4DYI2 1134 aa16.47■□□□□ 0.23
DNMT3A-208ENST00000466601 DYNC1LI2O43237 492 aaPredicted RBP16.47■□□□□ 0.23
DNMT3A-208ENST00000466601 FIBPO43427 364 aa16.47■□□□□ 0.23
DNMT3A-208ENST00000466601 TGFB3P10600 412 aa16.47■□□□□ 0.23
DNMT3A-208ENST00000466601 PTGS1P23219 599 aa16.47■□□□□ 0.23
DNMT3A-208ENST00000466601 GJA9P57773 515 aa16.47■□□□□ 0.23
DNMT3A-208ENST00000466601 SEMA3FQ13275 785 aa16.47■□□□□ 0.23
DNMT3A-208ENST00000466601 CEP55Q53EZ4 464 aa16.47■□□□□ 0.23
DNMT3A-208ENST00000466601 PIK3AP1Q6ZUJ8 805 aa16.47■□□□□ 0.23
DNMT3A-208ENST00000466601 TLK2Q86UE8 772 aa16.47■□□□□ 0.23
DNMT3A-208ENST00000466601 ARRDC4Q8NCT1 418 aa16.47■□□□□ 0.23
DNMT3A-208ENST00000466601 COPS5Q92905 334 aa16.47■□□□□ 0.23
DNMT3A-208ENST00000466601 TNFRSF25Q93038 417 aa16.47■□□□□ 0.23
DNMT3A-208ENST00000466601 GPRASP2Q96D09 838 aa16.47■□□□□ 0.23
DNMT3A-208ENST00000466601 AP5M1Q9H0R1 490 aa16.47■□□□□ 0.23
DNMT3A-208ENST00000466601 SPC25Q9HBM1 224 aa16.47■□□□□ 0.23
DNMT3A-208ENST00000466601 FOXD4L1Q9NU39 408 aa16.47■□□□□ 0.23
DNMT3A-208ENST00000466601 SYNRGQ9UMZ2 1314 aa16.46■□□□□ 0.23
DNMT3A-208ENST00000466601 EDIL3O43854 480 aa16.46■□□□□ 0.23
DNMT3A-208ENST00000466601 ADAMTS4O75173 837 aa16.46■□□□□ 0.23
DNMT3A-208ENST00000466601 MYCNP04198 464 aaPredicted RBP16.46■□□□□ 0.23
DNMT3A-208ENST00000466601 CIITAP33076 1130 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms