RNA–Protein interactions for RNA: ENST00000466508.5

PPP1R3F-203, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 1,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-203ENST00000466508 DLK2Q6UY11 383 aa23.73■■□□□ 1.39
PPP1R3F-203ENST00000466508 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.73■■□□□ 1.39
PPP1R3F-203ENST00000466508 MCF2L2Q86YR7 1114 aa23.73■■□□□ 1.39
PPP1R3F-203ENST00000466508 NUDT12Q9BQG2 462 aa23.73■■□□□ 1.39
PPP1R3F-203ENST00000466508 BLOC1S4Q9NUP1 217 aa23.73■■□□□ 1.39
PPP1R3F-203ENST00000466508 SCN4AP35499 1836 aa23.73■■□□□ 1.39
PPP1R3F-203ENST00000466508 KDM3AQ9Y4C1 1321 aa23.73■■□□□ 1.39
PPP1R3F-203ENST00000466508 VWA5AO00534 786 aa23.73■■□□□ 1.39
PPP1R3F-203ENST00000466508 SLC26A4O43511 780 aa23.73■■□□□ 1.39
PPP1R3F-203ENST00000466508 PPP1R12BO60237 982 aaPredicted RBP23.73■■□□□ 1.39
PPP1R3F-203ENST00000466508 CD44P16070 742 aaKnown RBP23.73■■□□□ 1.39
PPP1R3F-203ENST00000466508 ZNF658Q5TYW1 1059 aaPredicted RBP23.73■■□□□ 1.39
PPP1R3F-203ENST00000466508 DRC7Q8IY82 874 aa23.73■■□□□ 1.39
PPP1R3F-203ENST00000466508 SMYD4Q8IYR2 804 aaPredicted RBP23.73■■□□□ 1.39
PPP1R3F-203ENST00000466508 TRIM9Q9C026 710 aa23.73■■□□□ 1.39
PPP1R3F-203ENST00000466508 FANCLQ9NW38 375 aa23.73■■□□□ 1.39
PPP1R3F-203ENST00000466508 ZKSCAN5Q9Y2L8 839 aa23.73■■□□□ 1.39
PPP1R3F-203ENST00000466508 CTDP1Q9Y5B0 961 aaPredicted RBP23.73■■□□□ 1.39
PPP1R3F-203ENST00000466508 SNCAIPQ9Y6H5 919 aa23.73■■□□□ 1.39
PPP1R3F-203ENST00000466508 IGLV3-22A0A075B6J6 115 aa23.72■■□□□ 1.39
PPP1R3F-203ENST00000466508 PPP1R3GB7ZBB8 358 aa23.72■■□□□ 1.39
PPP1R3F-203ENST00000466508 NFIBO00712 420 aa23.72■■□□□ 1.39
PPP1R3F-203ENST00000466508 TOMM70O94826 608 aa23.72■■□□□ 1.39
PPP1R3F-203ENST00000466508 ALAS1P13196 640 aa23.72■■□□□ 1.39
PPP1R3F-203ENST00000466508 MAP3K9P80192 1104 aa23.72■■□□□ 1.39
PPP1R3F-203ENST00000466508 SPIRE1Q08AE8 756 aa23.72■■□□□ 1.39
PPP1R3F-203ENST00000466508 HYIQ5T013 277 aa23.72■■□□□ 1.39
PPP1R3F-203ENST00000466508 ZC3H15Q8WU90 426 aaKnown RBP23.72■■□□□ 1.39
PPP1R3F-203ENST00000466508 LARP4BQ92615 738 aaKnown RBP23.72■■□□□ 1.39
PPP1R3F-203ENST00000466508 MED15Q96RN5 788 aa23.72■■□□□ 1.39
PPP1R3F-203ENST00000466508 C7orf25Q9BPX7 421 aa23.72■■□□□ 1.39
PPP1R3F-203ENST00000466508 MSH4O15457 936 aa23.71■■□□□ 1.39
PPP1R3F-203ENST00000466508 KLRC4O43908 158 aa23.71■■□□□ 1.39
PPP1R3F-203ENST00000466508 ATP1A3P13637 1013 aa23.71■■□□□ 1.39
PPP1R3F-203ENST00000466508 EPHX2P34913 555 aa23.71■■□□□ 1.39
PPP1R3F-203ENST00000466508 SV2BQ7L1I2 683 aa23.71■■□□□ 1.39
PPP1R3F-203ENST00000466508 TRMT44Q8IYL2 757 aaKnown RBP23.71■■□□□ 1.39
PPP1R3F-203ENST00000466508 CYP2W1Q8TAV3 490 aa23.71■■□□□ 1.39
PPP1R3F-203ENST00000466508 ATG4CQ96DT6 458 aa23.71■■□□□ 1.39
PPP1R3F-203ENST00000466508 TMOD4Q9NZQ9 345 aa23.71■■□□□ 1.39
PPP1R3F-203ENST00000466508 NFE2L3Q9Y4A8 694 aa23.71■■□□□ 1.39
PPP1R3F-203ENST00000466508 TPM3P06753 285 aa23.7■■□□□ 1.39
PPP1R3F-203ENST00000466508 SAMD3Q8N6K7 520 aa23.7■■□□□ 1.39
PPP1R3F-203ENST00000466508 RBM46Q8TBY0 533 aaKnown RBP23.7■■□□□ 1.39
PPP1R3F-203ENST00000466508 UIMC1Q96RL1 719 aa23.7■■□□□ 1.39
PPP1R3F-203ENST00000466508 NT5C3AQ9H0P0 336 aa23.7■■□□□ 1.39
PPP1R3F-203ENST00000466508 MAP3K20Q9NYL2 800 aaKnown RBP23.7■■□□□ 1.39
PPP1R3F-203ENST00000466508 RABGAP1Q9Y3P9 1069 aa23.7■■□□□ 1.39
PPP1R3F-203ENST00000466508 SYNRGQ9UMZ2 1314 aa23.7■■□□□ 1.38
PPP1R3F-203ENST00000466508 RHOBTB3O94955 611 aa23.7■■□□□ 1.38
PPP1R3F-203ENST00000466508 FANCCQ00597 558 aa23.7■■□□□ 1.38
PPP1R3F-203ENST00000466508 KMT5BQ4FZB7 885 aa23.7■■□□□ 1.38
PPP1R3F-203ENST00000466508 KLHL10Q6JEL2 608 aa23.7■■□□□ 1.38
PPP1R3F-203ENST00000466508 RAD54LQ92698 747 aa23.7■■□□□ 1.38
PPP1R3F-203ENST00000466508 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.7■■□□□ 1.38
PPP1R3F-203ENST00000466508 IFNKQ9P0W0 207 aa23.7■■□□□ 1.38
PPP1R3F-203ENST00000466508 CSADQ9Y600 493 aa23.7■■□□□ 1.38
PPP1R3F-203ENST00000466508 MSNP26038 577 aaKnown RBP23.69■■□□□ 1.38
PPP1R3F-203ENST00000466508 CCT6AP40227 531 aaKnown RBP23.69■■□□□ 1.38
PPP1R3F-203ENST00000466508 SH3D19Q5HYK7 790 aa23.69■■□□□ 1.38
PPP1R3F-203ENST00000466508 WNK4Q96J92 1243 aa23.69■■□□□ 1.38
PPP1R3F-203ENST00000466508 HOMER2Q9NSB8 354 aa23.69■■□□□ 1.38
PPP1R3F-203ENST00000466508 ADAMTS5Q9UNA0 930 aa23.69■■□□□ 1.38
PPP1R3F-203ENST00000466508 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.69■■□□□ 1.38
PPP1R3F-203ENST00000466508 ZNF18P17022 549 aa23.68■■□□□ 1.38
PPP1R3F-203ENST00000466508 DSG3P32926 999 aa23.68■■□□□ 1.38
PPP1R3F-203ENST00000466508 COG2Q14746 738 aa23.68■■□□□ 1.38
PPP1R3F-203ENST00000466508 ECM1Q16610 540 aa23.68■■□□□ 1.38
PPP1R3F-203ENST00000466508 CEP55Q53EZ4 464 aa23.68■■□□□ 1.38
PPP1R3F-203ENST00000466508 MUM1L1Q5H9M0 696 aa23.68■■□□□ 1.38
PPP1R3F-203ENST00000466508 HAUS3Q68CZ6 603 aa23.68■■□□□ 1.38
PPP1R3F-203ENST00000466508 XPO4Q9C0E2 1151 aaKnown RBP23.68■■□□□ 1.38
PPP1R3F-203ENST00000466508 RRAGDQ9NQL2 400 aaPredicted RBP23.68■■□□□ 1.38
PPP1R3F-203ENST00000466508 COL20A1Q9P218 1284 aa23.68■■□□□ 1.38
PPP1R3F-203ENST00000466508 RPTORQ8N122 1335 aa23.68■■□□□ 1.38
PPP1R3F-203ENST00000466508 POTECB2RU33 542 aa23.68■■□□□ 1.38
PPP1R3F-203ENST00000466508 STAT3P40763 770 aa23.68■■□□□ 1.38
PPP1R3F-203ENST00000466508 IREB2P48200 963 aaKnown RBP23.68■■□□□ 1.38
PPP1R3F-203ENST00000466508 OAZ1P54368 228 aa23.68■■□□□ 1.38
PPP1R3F-203ENST00000466508 UBXN2AP68543 259 aa23.68■■□□□ 1.38
PPP1R3F-203ENST00000466508 MCM6Q14566 821 aa23.68■■□□□ 1.38
PPP1R3F-203ENST00000466508 CATSPERGQ6ZRH7 1159 aa23.68■■□□□ 1.38
PPP1R3F-203ENST00000466508 KCNK18Q7Z418 384 aa23.68■■□□□ 1.38
PPP1R3F-203ENST00000466508 REPS2Q8NFH8 660 aa23.68■■□□□ 1.38
PPP1R3F-203ENST00000466508 CCDC47Q96A33 483 aaKnown RBP23.68■■□□□ 1.38
PPP1R3F-203ENST00000466508 VAV3Q9UKW4 847 aa23.68■■□□□ 1.38
PPP1R3F-203ENST00000466508 ASIC1P78348 528 aa23.67■■□□□ 1.38
PPP1R3F-203ENST00000466508 DHX8Q14562 1220 aaKnown RBP23.67■■□□□ 1.38
PPP1R3F-203ENST00000466508 SPATA1Q5VX52 437 aa23.67■■□□□ 1.38
PPP1R3F-203ENST00000466508 GDAQ9Y2T3 454 aa23.67■■□□□ 1.38
PPP1R3F-203ENST00000466508 STK24Q9Y6E0 443 aa23.67■■□□□ 1.38
PPP1R3F-203ENST00000466508 MYPNQ86TC9 1320 aa23.67■■□□□ 1.38
PPP1R3F-203ENST00000466508 NF2P35240 595 aa23.66■■□□□ 1.38
PPP1R3F-203ENST00000466508 SETQ01105 290 aaPredicted RBP23.66■■□□□ 1.38
PPP1R3F-203ENST00000466508 GIMAP8Q8ND71 665 aaPredicted RBP23.66■■□□□ 1.38
PPP1R3F-203ENST00000466508 ERMNQ8TAM6 284 aa23.66■■□□□ 1.38
PPP1R3F-203ENST00000466508 CDCA5Q96FF9 252 aa23.66■■□□□ 1.38
PPP1R3F-203ENST00000466508 TRERF1Q96PN7 1200 aa23.66■■□□□ 1.38
PPP1R3F-203ENST00000466508 LRRC27Q9C0I9 530 aa23.66■■□□□ 1.38
PPP1R3F-203ENST00000466508 CTNND2Q9UQB3 1225 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms