RNA–Protein interactions for RNA: ENST00000466410.5

LIMS2-212, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-212ENST00000466410 CCDC102AQ96A19 550 aa21.52■■□□□ 1.04
LIMS2-212ENST00000466410 PSD3Q9NYI0 1048 aa21.52■■□□□ 1.04
LIMS2-212ENST00000466410 PLIN4Q96Q06 1357 aa21.52■■□□□ 1.03
LIMS2-212ENST00000466410 C6orf229H3BNL8 230 aa21.51■■□□□ 1.03
LIMS2-212ENST00000466410 PPP1R11O60927 126 aaPredicted RBP21.51■■□□□ 1.03
LIMS2-212ENST00000466410 ZMYND10O75800 440 aa21.51■■□□□ 1.03
LIMS2-212ENST00000466410 GTF2IP78347 998 aa21.51■■□□□ 1.03
LIMS2-212ENST00000466410 KRT79Q5XKE5 535 aa21.51■■□□□ 1.03
LIMS2-212ENST00000466410 CAGE1Q8TC20 777 aa21.51■■□□□ 1.03
LIMS2-212ENST00000466410 RAB34Q9BZG1 259 aa21.51■■□□□ 1.03
LIMS2-212ENST00000466410 JMJD4Q9H9V9 463 aa21.51■■□□□ 1.03
LIMS2-212ENST00000466410 ATP2B2Q01814 1243 aa21.51■■□□□ 1.03
LIMS2-212ENST00000466410 LRRC55Q6ZSA7 311 aa21.51■■□□□ 1.03
LIMS2-212ENST00000466410 RBM17Q96I25 401 aaKnown RBP21.51■■□□□ 1.03
LIMS2-212ENST00000466410 RPGRIP1Q96KN7 1286 aa21.51■■□□□ 1.03
LIMS2-212ENST00000466410 IFIH1Q9BYX4 1025 aaKnown RBP21.51■■□□□ 1.03
LIMS2-212ENST00000466410 CAPN6Q9Y6Q1 641 aa21.51■■□□□ 1.03
LIMS2-212ENST00000466410 PHACTR2O75167 634 aa21.5■■□□□ 1.03
LIMS2-212ENST00000466410 SERPINB2P05120 415 aa21.5■■□□□ 1.03
LIMS2-212ENST00000466410 EIF4A3P38919 411 aaKnown RBP21.5■■□□□ 1.03
LIMS2-212ENST00000466410 EHHADHQ08426 723 aa21.5■■□□□ 1.03
LIMS2-212ENST00000466410 TMEM119Q4V9L6 283 aa21.5■■□□□ 1.03
LIMS2-212ENST00000466410 TTBK2Q6IQ55 1244 aa21.5■■□□□ 1.03
LIMS2-212ENST00000466410 IQCDQ96DY2 449 aa21.5■■□□□ 1.03
LIMS2-212ENST00000466410 TSGA10Q9BZW7 698 aa21.5■■□□□ 1.03
LIMS2-212ENST00000466410 DDX4Q9NQI0 724 aaKnown RBP21.5■■□□□ 1.03
LIMS2-212ENST00000466410 PCDHA13Q9Y5I0 950 aa21.5■■□□□ 1.03
LIMS2-212ENST00000466410 MYH10P35580 1976 aa21.5■■□□□ 1.03
LIMS2-212ENST00000466410 IGKV6D-41A0A0C4DH26 115 aa21.5■■□□□ 1.03
LIMS2-212ENST00000466410 KIF11P52732 1056 aa21.5■■□□□ 1.03
LIMS2-212ENST00000466410 LRRC63Q05C16 580 aa21.5■■□□□ 1.03
LIMS2-212ENST00000466410 ADGRF4Q8IZF3 695 aa21.5■■□□□ 1.03
LIMS2-212ENST00000466410 MLXIPQ9HAP2 919 aa21.5■■□□□ 1.03
LIMS2-212ENST00000466410 PODXL2Q9NZ53 605 aa21.5■■□□□ 1.03
LIMS2-212ENST00000466410 F8W031 263 aaPredicted RBP21.49■■□□□ 1.03
LIMS2-212ENST00000466410 RRAGAQ7L523 313 aa21.49■■□□□ 1.03
LIMS2-212ENST00000466410 RIC8AQ9NPQ8 531 aa21.49■■□□□ 1.03
LIMS2-212ENST00000466410 FOCADQ5VW36 1801 aa21.49■■□□□ 1.03
LIMS2-212ENST00000466410 PNMA6FA0A0J9YX94 578 aa21.49■■□□□ 1.03
LIMS2-212ENST00000466410 LRRC53A6NM62 1247 aa21.49■■□□□ 1.03
LIMS2-212ENST00000466410 GYS1P13807 737 aa21.49■■□□□ 1.03
LIMS2-212ENST00000466410 ZNF543Q08ER8 600 aa21.49■■□□□ 1.03
LIMS2-212ENST00000466410 CCDC84Q86UT8 332 aaPredicted RBP21.49■■□□□ 1.03
LIMS2-212ENST00000466410 CCDC155Q8N6L0 562 aa21.49■■□□□ 1.03
LIMS2-212ENST00000466410 HAS1Q92839 578 aa21.49■■□□□ 1.03
LIMS2-212ENST00000466410 SH2D4AQ9H788 454 aa21.49■■□□□ 1.03
LIMS2-212ENST00000466410 TARSL2A2RTX5 802 aaKnown RBP21.48■■□□□ 1.03
LIMS2-212ENST00000466410 USO1O60763 962 aaKnown RBP21.48■■□□□ 1.03
LIMS2-212ENST00000466410 BBOX1O75936 387 aa21.48■■□□□ 1.03
LIMS2-212ENST00000466410 FGFR1OPO95684 399 aaKnown RBP21.48■■□□□ 1.03
LIMS2-212ENST00000466410 SLC16A2P36021 539 aa21.48■■□□□ 1.03
LIMS2-212ENST00000466410 C2orf54Q08AI8 447 aa21.48■■□□□ 1.03
LIMS2-212ENST00000466410 ZSCAN26Q16670 478 aa21.48■■□□□ 1.03
LIMS2-212ENST00000466410 HSP90B2PQ58FF3 399 aa21.48■■□□□ 1.03
LIMS2-212ENST00000466410 TRIM58Q8NG06 486 aa21.48■■□□□ 1.03
LIMS2-212ENST00000466410 BAP1Q92560 729 aa21.48■■□□□ 1.03
LIMS2-212ENST00000466410 DRC1Q96MC2 740 aa21.48■■□□□ 1.03
LIMS2-212ENST00000466410 ABCB11O95342 1321 aa21.48■■□□□ 1.03
LIMS2-212ENST00000466410 ONECUT3O60422 494 aaPredicted RBP21.48■■□□□ 1.03
LIMS2-212ENST00000466410 MOCS3O95396 460 aa21.48■■□□□ 1.03
LIMS2-212ENST00000466410 PPP4R3AQ6IN85 833 aa21.48■■□□□ 1.03
LIMS2-212ENST00000466410 DNAJC19Q96DA6 116 aa21.48■■□□□ 1.03
LIMS2-212ENST00000466410 GDAP1L1Q96MZ0 367 aa21.48■■□□□ 1.03
LIMS2-212ENST00000466410 DEF6Q9H4E7 631 aa21.48■■□□□ 1.03
LIMS2-212ENST00000466410 DDX25Q9UHL0 483 aaKnown RBP21.48■■□□□ 1.03
LIMS2-212ENST00000466410 SNX12Q9UMY4 172 aa21.48■■□□□ 1.03
LIMS2-212ENST00000466410 TTLL1O95922 423 aa21.47■■□□□ 1.03
LIMS2-212ENST00000466410 TNNT3P45378 269 aaPredicted RBP21.47■■□□□ 1.03
LIMS2-212ENST00000466410 FAM71BQ8TC56 605 aa21.47■■□□□ 1.03
LIMS2-212ENST00000466410 UIMC1Q96RL1 719 aa21.47■■□□□ 1.03
LIMS2-212ENST00000466410 JRKLQ9Y4A0 524 aa21.47■■□□□ 1.03
LIMS2-212ENST00000466410 MYH7BA7E2Y1 1941 aa21.47■■□□□ 1.03
LIMS2-212ENST00000466410 RIMBP2O15034 1052 aa21.47■■□□□ 1.03
LIMS2-212ENST00000466410 AKR1B10O60218 316 aa21.47■■□□□ 1.03
LIMS2-212ENST00000466410 LCA5LO95447 670 aa21.47■■□□□ 1.03
LIMS2-212ENST00000466410 MYBL2P10244 700 aa21.47■■□□□ 1.03
LIMS2-212ENST00000466410 MCM3P25205 808 aa21.47■■□□□ 1.03
LIMS2-212ENST00000466410 CLK2P49760 499 aaKnown RBP21.47■■□□□ 1.03
LIMS2-212ENST00000466410 CREG2Q8IUH2 290 aa21.47■■□□□ 1.03
LIMS2-212ENST00000466410 GSPT2Q8IYD1 628 aaKnown RBP21.47■■□□□ 1.03
LIMS2-212ENST00000466410 TACC1O75410 805 aa21.46■■□□□ 1.03
LIMS2-212ENST00000466410 COASYQ13057 564 aa21.46■■□□□ 1.03
LIMS2-212ENST00000466410 PSMD2Q13200 908 aa21.46■■□□□ 1.03
LIMS2-212ENST00000466410 MUM1L1Q5H9M0 696 aa21.46■■□□□ 1.03
LIMS2-212ENST00000466410 COG1Q8WTW3 980 aa21.46■■□□□ 1.03
LIMS2-212ENST00000466410 MAP9Q49MG5 647 aa21.46■■□□□ 1.03
LIMS2-212ENST00000466410 MYOCDQ8IZQ8 938 aa21.46■■□□□ 1.03
LIMS2-212ENST00000466410 HINFPQ9BQA5 517 aa21.46■■□□□ 1.03
LIMS2-212ENST00000466410 TANGO6Q9C0B7 1094 aa21.46■■□□□ 1.03
LIMS2-212ENST00000466410 ACBD3Q9H3P7 528 aa21.46■■□□□ 1.03
LIMS2-212ENST00000466410 VIPAS39Q9H9C1 493 aa21.46■■□□□ 1.03
LIMS2-212ENST00000466410 SERPINB13Q9UIV8 391 aa21.46■■□□□ 1.03
LIMS2-212ENST00000466410 SLURP2P0DP57 97 aa21.45■■□□□ 1.03
LIMS2-212ENST00000466410 KCNMA1Q12791 1236 aa21.45■■□□□ 1.03
LIMS2-212ENST00000466410 PPP1R18Q6NYC8 613 aa21.45■■□□□ 1.03
LIMS2-212ENST00000466410 CUL5Q93034 780 aa21.45■■□□□ 1.03
LIMS2-212ENST00000466410 TSG101Q99816 390 aa21.45■■□□□ 1.03
LIMS2-212ENST00000466410 FGFBP2Q9BYJ0 223 aa21.45■■□□□ 1.03
LIMS2-212ENST00000466410 LRRC27Q9C0I9 530 aa21.45■■□□□ 1.03
LIMS2-212ENST00000466410 MED4Q9NPJ6 270 aa21.45■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms