RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 NAPAP54920 295 aa11.22□□□□□ -0.61
RTFDC1-205ENST00000466260 GJA9P57773 515 aa11.22□□□□□ -0.61
RTFDC1-205ENST00000466260 STXBP2Q15833 593 aa11.22□□□□□ -0.61
RTFDC1-205ENST00000466260 IQSEC1Q6DN90 963 aa11.22□□□□□ -0.61
RTFDC1-205ENST00000466260 USP17L6PQ6QN14 398 aa11.22□□□□□ -0.61
RTFDC1-205ENST00000466260 SLC39A5Q6ZMH5 540 aa11.22□□□□□ -0.61
RTFDC1-205ENST00000466260 IL31RAQ8NI17 732 aa11.22□□□□□ -0.61
RTFDC1-205ENST00000466260 NCOA5Q9HCD5 579 aaKnown RBP11.22□□□□□ -0.61
RTFDC1-205ENST00000466260 ZSWIM6Q9HCJ5 1215 aa11.22□□□□□ -0.61
RTFDC1-205ENST00000466260 PDRG1Q9NUG6 133 aa11.22□□□□□ -0.61
RTFDC1-205ENST00000466260 PHF24Q9UPV7 400 aa11.22□□□□□ -0.61
RTFDC1-205ENST00000466260 GNEQ9Y223 722 aaKnown RBP11.22□□□□□ -0.61
RTFDC1-205ENST00000466260 PQBP1O60828 265 aaKnown RBP11.21□□□□□ -0.61
RTFDC1-205ENST00000466260 MYL3P08590 195 aa11.21□□□□□ -0.61
RTFDC1-205ENST00000466260 TXNP10599 105 aaKnown RBP11.21□□□□□ -0.61
RTFDC1-205ENST00000466260 SMARCA1P28370 1054 aa11.21□□□□□ -0.61
RTFDC1-205ENST00000466260 CHMP4BP1P59074 171 aa11.21□□□□□ -0.61
RTFDC1-205ENST00000466260 TOB2Q14106 344 aaPredicted RBP11.21□□□□□ -0.61
RTFDC1-205ENST00000466260 TTLL4Q14679 1199 aa11.21□□□□□ -0.61
RTFDC1-205ENST00000466260 PGM5Q15124 567 aa11.21□□□□□ -0.61
RTFDC1-205ENST00000466260 FSCN1Q16658 493 aaKnown RBP11.21□□□□□ -0.61
RTFDC1-205ENST00000466260 LY6KQ17RY6 165 aa11.21□□□□□ -0.61
RTFDC1-205ENST00000466260 DUSP28Q4G0W2 176 aa11.21□□□□□ -0.61
RTFDC1-205ENST00000466260 WWC2Q6AWC2 1192 aa11.21□□□□□ -0.61
RTFDC1-205ENST00000466260 CXCL17Q6UXB2 119 aa11.21□□□□□ -0.61
RTFDC1-205ENST00000466260 PCSK9Q8NBP7 692 aaKnown RBP11.21□□□□□ -0.61
RTFDC1-205ENST00000466260 KLHDC9Q8NEP7 349 aa11.21□□□□□ -0.61
RTFDC1-205ENST00000466260 PPP1R13LQ8WUF5 828 aa11.21□□□□□ -0.61
RTFDC1-205ENST00000466260 PHKBQ93100 1093 aa11.21□□□□□ -0.61
RTFDC1-205ENST00000466260 PGBD1Q96JS3 809 aa11.21□□□□□ -0.61
RTFDC1-205ENST00000466260 GLT1D1Q96MS3 346 aa11.21□□□□□ -0.61
RTFDC1-205ENST00000466260 PDCD2LQ9BRP1 358 aa11.21□□□□□ -0.61
RTFDC1-205ENST00000466260 UPF3AQ9H1J1 476 aaKnown RBP11.21□□□□□ -0.61
RTFDC1-205ENST00000466260 FAM217BQ9NTX9 383 aaPredicted RBP11.21□□□□□ -0.61
RTFDC1-205ENST00000466260 MRVI1Q9Y6F6 885 aa11.21□□□□□ -0.61
RTFDC1-205ENST00000466260 V9GY48 417 aaPredicted RBP11.21□□□□□ -0.61
RTFDC1-205ENST00000466260 LOC102724159A0A0B4J2E5 919 aa11.2□□□□□ -0.62
RTFDC1-205ENST00000466260 MOXD2PA6NHM9 499 aa11.2□□□□□ -0.62
RTFDC1-205ENST00000466260 CTAGE5O15320 804 aa11.2□□□□□ -0.62
RTFDC1-205ENST00000466260 DTNBO60941 627 aa11.2□□□□□ -0.62
RTFDC1-205ENST00000466260 CCND2P30279 289 aa11.2□□□□□ -0.62
RTFDC1-205ENST00000466260 PSMC6P62333 389 aa11.2□□□□□ -0.62
RTFDC1-205ENST00000466260 PWP2Q15269 919 aaKnown RBP11.2□□□□□ -0.62
RTFDC1-205ENST00000466260 SCFD2Q8WU76 684 aa11.2□□□□□ -0.62
RTFDC1-205ENST00000466260 IWS1Q96ST2 819 aa11.2□□□□□ -0.62
RTFDC1-205ENST00000466260 SLC26A6Q9BXS9 759 aa11.2□□□□□ -0.62
RTFDC1-205ENST00000466260 BACH2Q9BYV9 841 aa11.2□□□□□ -0.62
RTFDC1-205ENST00000466260 RTEL1Q9NZ71 1219 aa11.2□□□□□ -0.62
RTFDC1-205ENST00000466260 PRKAG2Q9UGJ0 569 aa11.2□□□□□ -0.62
RTFDC1-205ENST00000466260 COLQQ9Y215 455 aaPredicted RBP11.2□□□□□ -0.62
RTFDC1-205ENST00000466260 CCDC196A0A1B0GTZ2 297 aa11.19□□□□□ -0.62
RTFDC1-205ENST00000466260 RBM47A0AV96 593 aaKnown RBP11.19□□□□□ -0.62
RTFDC1-205ENST00000466260 MEIS2O14770 477 aa11.19□□□□□ -0.62
RTFDC1-205ENST00000466260 ZEB2O60315 1214 aa11.19□□□□□ -0.62
RTFDC1-205ENST00000466260 CST5P28325 142 aaPredicted RBP11.19□□□□□ -0.62
RTFDC1-205ENST00000466260 PDIA3P30101 505 aaKnown RBP11.19□□□□□ -0.62
RTFDC1-205ENST00000466260 MDM2Q00987 491 aaPredicted RBP11.19□□□□□ -0.62
RTFDC1-205ENST00000466260 AKAP17AQ02040 695 aaKnown RBP11.19□□□□□ -0.62
RTFDC1-205ENST00000466260 GHRHRQ02643 423 aa11.19□□□□□ -0.62
RTFDC1-205ENST00000466260 FUT2Q10981 343 aa11.19□□□□□ -0.62
RTFDC1-205ENST00000466260 CCSAPQ6IQ19 270 aaPredicted RBP11.19□□□□□ -0.62
RTFDC1-205ENST00000466260 TYW1BQ6NUM6 668 aa11.19□□□□□ -0.62
RTFDC1-205ENST00000466260 TSEN34Q9BSV6 310 aaKnown RBP11.19□□□□□ -0.62
RTFDC1-205ENST00000466260 AGXT2Q9BYV1 514 aa11.19□□□□□ -0.62
RTFDC1-205ENST00000466260 TM6SF1Q9BZW5 370 aa11.19□□□□□ -0.62
RTFDC1-205ENST00000466260 PSTPIP2Q9H939 334 aa11.19□□□□□ -0.62
RTFDC1-205ENST00000466260 MAP3K20Q9NYL2 800 aaKnown RBP11.19□□□□□ -0.62
RTFDC1-205ENST00000466260 NID2Q14112 1375 aa11.18□□□□□ -0.62
RTFDC1-205ENST00000466260 A0A0U1RQG5 324 aaPredicted RBP11.18□□□□□ -0.62
RTFDC1-205ENST00000466260 SPDYE3A6NKU9 549 aa11.18□□□□□ -0.62
RTFDC1-205ENST00000466260 STXBP3O00186 592 aa11.18□□□□□ -0.62
RTFDC1-205ENST00000466260 CPLX1O14810 134 aa11.18□□□□□ -0.62
RTFDC1-205ENST00000466260 EIF3JO75822 258 aaKnown RBP11.18□□□□□ -0.62
RTFDC1-205ENST00000466260 GH1P01241 217 aa11.18□□□□□ -0.62
RTFDC1-205ENST00000466260 CPT1AP50416 773 aa11.18□□□□□ -0.62
RTFDC1-205ENST00000466260 ADCY7P51828 1080 aa11.18□□□□□ -0.62
RTFDC1-205ENST00000466260 RCAN1P53805 252 aa11.18□□□□□ -0.62
RTFDC1-205ENST00000466260 AK2P54819 239 aa11.18□□□□□ -0.62
RTFDC1-205ENST00000466260 TLE2Q04725 743 aa11.18□□□□□ -0.62
RTFDC1-205ENST00000466260 C8orf34Q49A92 452 aa11.18□□□□□ -0.62
RTFDC1-205ENST00000466260 FAM47CQ5HY64 1035 aa11.18□□□□□ -0.62
RTFDC1-205ENST00000466260 SH3RF1Q7Z6J0 888 aa11.18□□□□□ -0.62
RTFDC1-205ENST00000466260 MAF1Q9H063 256 aa11.18□□□□□ -0.62
RTFDC1-205ENST00000466260 TMEM260Q9NX78 707 aa11.18□□□□□ -0.62
RTFDC1-205ENST00000466260 PKD2L1Q9P0L9 805 aa11.18□□□□□ -0.62
RTFDC1-205ENST00000466260 SCN10AQ9Y5Y9 1956 aa11.17□□□□□ -0.62
RTFDC1-205ENST00000466260 SMCO2A6NFE2 343 aa11.17□□□□□ -0.62
RTFDC1-205ENST00000466260 NKRFO15226 690 aaKnown RBP eCLIP11.17□□□□□ -0.62
RTFDC1-205ENST00000466260 GALR2O43603 387 aaPredicted RBP11.17□□□□□ -0.62
RTFDC1-205ENST00000466260 GGPS1O95749 300 aa11.17□□□□□ -0.62
RTFDC1-205ENST00000466260 SCG2P13521 617 aa11.17□□□□□ -0.62
RTFDC1-205ENST00000466260 MAGEA10P43363 369 aaPredicted RBP11.17□□□□□ -0.62
RTFDC1-205ENST00000466260 MRPS9P82933 396 aaKnown RBP11.17□□□□□ -0.62
RTFDC1-205ENST00000466260 SP4Q02446 784 aa11.17□□□□□ -0.62
RTFDC1-205ENST00000466260 BRDTQ58F21 947 aaPredicted RBP11.17□□□□□ -0.62
RTFDC1-205ENST00000466260 JAKMIP3Q5VZ66 844 aa11.17□□□□□ -0.62
RTFDC1-205ENST00000466260 CCDC62Q6P9F0 684 aa11.17□□□□□ -0.62
RTFDC1-205ENST00000466260 DHX37Q8IY37 1157 aaKnown RBP11.17□□□□□ -0.62
RTFDC1-205ENST00000466260 SAMD3Q8N6K7 520 aa11.17□□□□□ -0.62
RTFDC1-205ENST00000466260 SPRYD3Q8NCJ5 442 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms