RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 LENG9Q96B70 501 aa12.69□□□□□ -0.38
VCP-204ENST00000466100 CHAMP1Q96JM3 812 aa12.69□□□□□ -0.38
VCP-204ENST00000466100 FTOQ9C0B1 505 aaKnown RBP eCLIP12.69□□□□□ -0.38
VCP-204ENST00000466100 KATNBL1Q9H079 304 aa12.69□□□□□ -0.38
VCP-204ENST00000466100 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.69□□□□□ -0.38
VCP-204ENST00000466100 FLRT1Q9NZU1 646 aa12.69□□□□□ -0.38
VCP-204ENST00000466100 UBIAD1Q9Y5Z9 338 aa12.69□□□□□ -0.38
VCP-204ENST00000466100 SYNGAP1Q96PV0 1343 aa12.68□□□□□ -0.38
VCP-204ENST00000466100 FRMPD3Q5JV73 1810 aa12.68□□□□□ -0.38
VCP-204ENST00000466100 FAM86B1E9PN63 330 aa12.68□□□□□ -0.38
VCP-204ENST00000466100 SLC37A4O43826 429 aa12.68□□□□□ -0.38
VCP-204ENST00000466100 RGS20O76081 388 aa12.68□□□□□ -0.38
VCP-204ENST00000466100 FAM86B2P0C5J1 330 aa12.68□□□□□ -0.38
VCP-204ENST00000466100 HSPA1AP0DMV8 641 aaKnown RBP12.68□□□□□ -0.38
VCP-204ENST00000466100 HSPA1BP0DMV9 641 aaKnown RBP12.68□□□□□ -0.38
VCP-204ENST00000466100 GCFC2P16383 781 aaKnown RBP12.68□□□□□ -0.38
VCP-204ENST00000466100 ITGB5P18084 799 aa12.68□□□□□ -0.38
VCP-204ENST00000466100 CCND2P30279 289 aa12.68□□□□□ -0.38
VCP-204ENST00000466100 ORC2Q13416 577 aaPredicted RBP12.68□□□□□ -0.38
VCP-204ENST00000466100 CCL14Q16627 93 aa12.68□□□□□ -0.38
VCP-204ENST00000466100 LETM2Q2VYF4 491 aa12.68□□□□□ -0.38
VCP-204ENST00000466100 TTC38Q5R3I4 469 aa12.68□□□□□ -0.38
VCP-204ENST00000466100 OLFML2BQ68BL8 750 aa12.68□□□□□ -0.38
VCP-204ENST00000466100 ARMCX2Q7L311 632 aa12.68□□□□□ -0.38
VCP-204ENST00000466100 NIPA1Q7RTP0 329 aa12.68□□□□□ -0.38
VCP-204ENST00000466100 MSL3Q8N5Y2 521 aaKnown RBP12.68□□□□□ -0.38
VCP-204ENST00000466100 CYP2W1Q8TAV3 490 aa12.68□□□□□ -0.38
VCP-204ENST00000466100 INPP4AQ96PE3 977 aaPredicted RBP12.68□□□□□ -0.38
VCP-204ENST00000466100 USP28Q96RU2 1077 aa12.68□□□□□ -0.38
VCP-204ENST00000466100 NOL7Q9UMY1 257 aaKnown RBP12.68□□□□□ -0.38
VCP-204ENST00000466100 PCDHB6Q9Y5E3 794 aa12.68□□□□□ -0.38
VCP-204ENST00000466100 ASB14A6NK59 587 aa12.67□□□□□ -0.38
VCP-204ENST00000466100 MEIS1O00470 390 aa12.67□□□□□ -0.38
VCP-204ENST00000466100 STAM2O75886 525 aa12.67□□□□□ -0.38
VCP-204ENST00000466100 SNAI1O95863 264 aaPredicted RBP12.67□□□□□ -0.38
VCP-204ENST00000466100 CYP2B6P20813 491 aa12.67□□□□□ -0.38
VCP-204ENST00000466100 DNM1Q05193 864 aaKnown RBP12.67□□□□□ -0.38
VCP-204ENST00000466100 SEMA3FQ13275 785 aa12.67□□□□□ -0.38
VCP-204ENST00000466100 PTPAQ15257 358 aa12.67□□□□□ -0.38
VCP-204ENST00000466100 Q4G0T1 1027 aa12.67□□□□□ -0.38
VCP-204ENST00000466100 CEP55Q53EZ4 464 aa12.67□□□□□ -0.38
VCP-204ENST00000466100 ATL3Q6DD88 541 aa12.67□□□□□ -0.38
VCP-204ENST00000466100 OTOP1Q7RTM1 612 aa12.67□□□□□ -0.38
VCP-204ENST00000466100 C4orf32Q8N8J7 132 aa12.67□□□□□ -0.38
VCP-204ENST00000466100 TNPO1Q92973 898 aaKnown RBP12.67□□□□□ -0.38
VCP-204ENST00000466100 MXRA8Q9BRK3 442 aa12.67□□□□□ -0.38
VCP-204ENST00000466100 TINF2Q9BSI4 451 aa12.67□□□□□ -0.38
VCP-204ENST00000466100 POLR3EQ9NVU0 708 aa12.67□□□□□ -0.38
VCP-204ENST00000466100 SLC5A4Q9NY91 659 aa12.67□□□□□ -0.38
VCP-204ENST00000466100 MORC2Q9Y6X9 1032 aaPredicted RBP12.67□□□□□ -0.38
VCP-204ENST00000466100 CCNT1O60563 726 aaKnown RBP12.66□□□□□ -0.38
VCP-204ENST00000466100 EIF3JO75822 258 aaKnown RBP12.66□□□□□ -0.38
VCP-204ENST00000466100 MYCLP12524 364 aaPredicted RBP12.66□□□□□ -0.38
VCP-204ENST00000466100 ATP2B1P20020 1258 aa12.66□□□□□ -0.38
VCP-204ENST00000466100 HOXD10P28358 340 aa12.66□□□□□ -0.38
VCP-204ENST00000466100 NASPP49321 788 aaPredicted RBP12.66□□□□□ -0.38
VCP-204ENST00000466100 PRMT2P55345 433 aa12.66□□□□□ -0.38
VCP-204ENST00000466100 PDE4DQ08499 809 aa12.66□□□□□ -0.38
VCP-204ENST00000466100 STXBP2Q15833 593 aa12.66□□□□□ -0.38
VCP-204ENST00000466100 FOXD4L6Q3SYB3 417 aaPredicted RBP12.66□□□□□ -0.38
VCP-204ENST00000466100 ANO1Q5XXA6 986 aa12.66□□□□□ -0.38
VCP-204ENST00000466100 FOXD4L3Q6VB84 417 aaPredicted RBP12.66□□□□□ -0.38
VCP-204ENST00000466100 CLEC17AQ6ZS10 378 aa12.66□□□□□ -0.38
VCP-204ENST00000466100 ETNPPLQ8TBG4 499 aa12.66□□□□□ -0.38
VCP-204ENST00000466100 TRIB2Q92519 343 aa12.66□□□□□ -0.38
VCP-204ENST00000466100 ZFP91Q96JP5 570 aaPredicted RBP12.66□□□□□ -0.38
VCP-204ENST00000466100 NAP1L4Q99733 375 aaKnown RBP12.66□□□□□ -0.38
VCP-204ENST00000466100 TMEM60Q9H2L4 133 aa12.66□□□□□ -0.38
VCP-204ENST00000466100 KCNMB3Q9NPA1 279 aa12.66□□□□□ -0.38
VCP-204ENST00000466100 JADE2Q9NQC1 790 aa12.66□□□□□ -0.38
VCP-204ENST00000466100 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.66□□□□□ -0.38
VCP-204ENST00000466100 RTEL1Q9NZ71 1219 aa12.66□□□□□ -0.38
VCP-204ENST00000466100 ATP6V1DQ9Y5K8 247 aa12.66□□□□□ -0.38
VCP-204ENST00000466100 CLIC4Q9Y696 253 aa12.66□□□□□ -0.38
VCP-204ENST00000466100 RBM47A0AV96 593 aaKnown RBP12.65□□□□□ -0.38
VCP-204ENST00000466100 B4DLN1 442 aa12.65□□□□□ -0.38
VCP-204ENST00000466100 NEMFO60524 1076 aa12.65□□□□□ -0.38
VCP-204ENST00000466100 ICAM3P32942 547 aa12.65□□□□□ -0.38
VCP-204ENST00000466100 MCM7P33993 719 aa12.65□□□□□ -0.38
VCP-204ENST00000466100 ATP2C1P98194 919 aaPredicted RBP12.65□□□□□ -0.38
VCP-204ENST00000466100 SETQ01105 290 aaPredicted RBP12.65□□□□□ -0.38
VCP-204ENST00000466100 ARHGEF6Q15052 776 aa12.65□□□□□ -0.38
VCP-204ENST00000466100 SF3A1Q15459 793 aaKnown RBP12.65□□□□□ -0.38
VCP-204ENST00000466100 ZNF174Q15697 407 aa12.65□□□□□ -0.38
VCP-204ENST00000466100 PRR16Q569H4 304 aa12.65□□□□□ -0.38
VCP-204ENST00000466100 TAPT1Q6NXT6 567 aa12.65□□□□□ -0.38
VCP-204ENST00000466100 POTEDQ86YR6 584 aa12.65□□□□□ -0.38
VCP-204ENST00000466100 GPRASP2Q96D09 838 aa12.65□□□□□ -0.38
VCP-204ENST00000466100 ZNF396Q96N95 335 aaPredicted RBP12.65□□□□□ -0.38
VCP-204ENST00000466100 MTMR9Q96QG7 549 aa12.65□□□□□ -0.38
VCP-204ENST00000466100 WDR11Q9BZH6 1224 aa12.65□□□□□ -0.38
VCP-204ENST00000466100 VTA1Q9NP79 307 aa12.65□□□□□ -0.38
VCP-204ENST00000466100 DDX25Q9UHL0 483 aaKnown RBP12.65□□□□□ -0.38
VCP-204ENST00000466100 SPATA31C2B4DYI2 1134 aa12.64□□□□□ -0.39
VCP-204ENST00000466100 MSH4O15457 936 aa12.64□□□□□ -0.39
VCP-204ENST00000466100 YEATS4O95619 227 aa12.64□□□□□ -0.39
VCP-204ENST00000466100 ARP10275 920 aa12.64□□□□□ -0.39
VCP-204ENST00000466100 CTCFP49711 727 aaPredicted RBP12.64□□□□□ -0.39
VCP-204ENST00000466100 PTGDRQ13258 359 aa12.64□□□□□ -0.39
VCP-204ENST00000466100 PLA2G4DQ86XP0 818 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms