RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 SPEF2Q9C093 1822 aa6.18□□□□□ -1.42
EXOSC3-204ENST00000465860 SNED1Q8TER0 1413 aa6.17□□□□□ -1.42
EXOSC3-204ENST00000465860 COL4A5P29400 1685 aa6.17□□□□□ -1.42
EXOSC3-204ENST00000465860 MYH3P11055 1940 aa6.17□□□□□ -1.42
EXOSC3-204ENST00000465860 RBAK-RBAKDNI3L0D1 243 aa6.17□□□□□ -1.42
EXOSC3-204ENST00000465860 VAMP4O75379 141 aa6.17□□□□□ -1.42
EXOSC3-204ENST00000465860 PDE6BP35913 854 aa6.17□□□□□ -1.42
EXOSC3-204ENST00000465860 CAP2P40123 477 aa6.17□□□□□ -1.42
EXOSC3-204ENST00000465860 CLCN7P51798 805 aa6.17□□□□□ -1.42
EXOSC3-204ENST00000465860 ETF1P62495 437 aaKnown RBP6.17□□□□□ -1.42
EXOSC3-204ENST00000465860 ST5P78524 1137 aa6.17□□□□□ -1.42
EXOSC3-204ENST00000465860 ZP2Q05996 745 aa6.17□□□□□ -1.42
EXOSC3-204ENST00000465860 TCIRG1Q13488 830 aa6.17□□□□□ -1.42
EXOSC3-204ENST00000465860 SEPT6Q14141 434 aa6.17□□□□□ -1.42
EXOSC3-204ENST00000465860 CCDC85BQ15834 202 aaPredicted RBP6.17□□□□□ -1.42
EXOSC3-204ENST00000465860 TWISTNBQ3B726 338 aaPredicted RBP6.17□□□□□ -1.42
EXOSC3-204ENST00000465860 CRY2Q49AN0 593 aa6.17□□□□□ -1.42
EXOSC3-204ENST00000465860 ZNF648Q5T619 568 aaPredicted RBP6.17□□□□□ -1.42
EXOSC3-204ENST00000465860 DIEXFQ68CQ4 756 aaKnown RBP6.17□□□□□ -1.42
EXOSC3-204ENST00000465860 WDR63Q8IWG1 891 aa6.17□□□□□ -1.42
EXOSC3-204ENST00000465860 TTLL6Q8N841 843 aa6.17□□□□□ -1.42
EXOSC3-204ENST00000465860 RIN3Q8TB24 985 aa6.17□□□□□ -1.42
EXOSC3-204ENST00000465860 JARID2Q92833 1246 aaPredicted RBP6.17□□□□□ -1.42
EXOSC3-204ENST00000465860 MIPEPQ99797 713 aa6.17□□□□□ -1.42
EXOSC3-204ENST00000465860 DUSP9Q99956 384 aaKnown RBP6.17□□□□□ -1.42
EXOSC3-204ENST00000465860 DBF4Q9UBU7 674 aaPredicted RBP6.17□□□□□ -1.42
EXOSC3-204ENST00000465860 AK5Q9Y6K8 562 aa6.17□□□□□ -1.42
EXOSC3-204ENST00000465860 IBTKQ9P2D0 1353 aaPredicted RBP6.17□□□□□ -1.42
EXOSC3-204ENST00000465860 RIC1Q4ADV7 1423 aa6.16□□□□□ -1.42
EXOSC3-204ENST00000465860 CCER2I3L3R5 266 aa6.16□□□□□ -1.42
EXOSC3-204ENST00000465860 RPS26P62854 115 aaKnown RBP6.16□□□□□ -1.42
EXOSC3-204ENST00000465860 JAG1P78504 1218 aa6.16□□□□□ -1.42
EXOSC3-204ENST00000465860 CALD1Q05682 793 aaKnown RBP6.16□□□□□ -1.42
EXOSC3-204ENST00000465860 C9orf131Q5VYM1 1079 aa6.16□□□□□ -1.42
EXOSC3-204ENST00000465860 STYK1Q6J9G0 422 aa6.16□□□□□ -1.42
EXOSC3-204ENST00000465860 HID1Q8IV36 788 aa6.16□□□□□ -1.42
EXOSC3-204ENST00000465860 MFSD2AQ8NA29 543 aa6.16□□□□□ -1.42
EXOSC3-204ENST00000465860 PLBD2Q8NHP8 589 aa6.16□□□□□ -1.42
EXOSC3-204ENST00000465860 ZNF526Q8TF50 670 aaPredicted RBP6.16□□□□□ -1.42
EXOSC3-204ENST00000465860 FAM89AQ96GI7 184 aa6.16□□□□□ -1.42
EXOSC3-204ENST00000465860 MASTLQ96GX5 879 aa6.16□□□□□ -1.42
EXOSC3-204ENST00000465860 ISCA1Q9BUE6 129 aa6.16□□□□□ -1.42
EXOSC3-204ENST00000465860 SEMA3GQ9NS98 782 aa6.16□□□□□ -1.42
EXOSC3-204ENST00000465860 HYPKQ9NX55 129 aa6.16□□□□□ -1.42
EXOSC3-204ENST00000465860 TPX2Q9ULW0 747 aaKnown RBP6.16□□□□□ -1.42
EXOSC3-204ENST00000465860 LRRC37AA6NMS7 1700 aa6.16□□□□□ -1.42
EXOSC3-204ENST00000465860 CEP350Q5VT06 3117 aa6.16□□□□□ -1.42
EXOSC3-204ENST00000465860 PI4KAP2A4QPH2 592 aa6.15□□□□□ -1.42
EXOSC3-204ENST00000465860 ANKRD33BA6NCL7 494 aa6.15□□□□□ -1.42
EXOSC3-204ENST00000465860 PATL2C9JE40 543 aaKnown RBP6.15□□□□□ -1.42
EXOSC3-204ENST00000465860 GFRA2O00451 464 aa6.15□□□□□ -1.42
EXOSC3-204ENST00000465860 NPHP1O15259 732 aa6.15□□□□□ -1.42
EXOSC3-204ENST00000465860 IGKV5-2P06315 115 aa6.15□□□□□ -1.42
EXOSC3-204ENST00000465860 ZNF865P0CJ78 1059 aaPredicted RBP6.15□□□□□ -1.42
EXOSC3-204ENST00000465860 NPR1P16066 1061 aa6.15□□□□□ -1.42
EXOSC3-204ENST00000465860 GRK4P32298 578 aa6.15□□□□□ -1.42
EXOSC3-204ENST00000465860 MAP3K11Q16584 847 aa6.15□□□□□ -1.42
EXOSC3-204ENST00000465860 CWF19L2Q2TBE0 894 aaKnown RBP6.15□□□□□ -1.42
EXOSC3-204ENST00000465860 SLC10A5Q5PT55 438 aa6.15□□□□□ -1.42
EXOSC3-204ENST00000465860 SFRP5Q5T4F7 317 aa6.15□□□□□ -1.42
EXOSC3-204ENST00000465860 CCDC30Q5VVM6 783 aa6.15□□□□□ -1.42
EXOSC3-204ENST00000465860 PRAMEF13Q5VWM6 474 aa6.15□□□□□ -1.42
EXOSC3-204ENST00000465860 AGMOQ6ZNB7 445 aa6.15□□□□□ -1.42
EXOSC3-204ENST00000465860 C22orf34Q6ZV56 151 aa6.15□□□□□ -1.42
EXOSC3-204ENST00000465860 PI4KAP1Q8N8J0 262 aa6.15□□□□□ -1.42
EXOSC3-204ENST00000465860 TMEM40Q8WWA1 233 aa6.15□□□□□ -1.42
EXOSC3-204ENST00000465860 HSPA12BQ96MM6 686 aa6.15□□□□□ -1.42
EXOSC3-204ENST00000465860 MYD88Q99836 296 aa6.15□□□□□ -1.42
EXOSC3-204ENST00000465860 UTP14AQ9BVJ6 771 aaKnown RBP6.15□□□□□ -1.42
EXOSC3-204ENST00000465860 NYXQ9GZU5 481 aa6.15□□□□□ -1.42
EXOSC3-204ENST00000465860 RNF181Q9P0P0 153 aa6.15□□□□□ -1.42
EXOSC3-204ENST00000465860 TRMT112Q9UI30 125 aaKnown RBP6.15□□□□□ -1.42
EXOSC3-204ENST00000465860 MAP3K2Q9Y2U5 619 aa6.15□□□□□ -1.42
EXOSC3-204ENST00000465860 LTBP1Q14766 1721 aa6.15□□□□□ -1.42
EXOSC3-204ENST00000465860 DUOX1Q9NRD9 1551 aa6.14□□□□□ -1.43
EXOSC3-204ENST00000465860 F6X3S4 739 aa6.14□□□□□ -1.43
EXOSC3-204ENST00000465860 CST3P01034 146 aaPredicted RBP6.14□□□□□ -1.43
EXOSC3-204ENST00000465860 LIG3P49916 1009 aa6.14□□□□□ -1.43
EXOSC3-204ENST00000465860 FGD1P98174 961 aa6.14□□□□□ -1.43
EXOSC3-204ENST00000465860 SLFN5Q08AF3 891 aa6.14□□□□□ -1.43
EXOSC3-204ENST00000465860 PARP10Q53GL7 1025 aa6.14□□□□□ -1.43
EXOSC3-204ENST00000465860 EAPPQ56P03 285 aaPredicted RBP6.14□□□□□ -1.43
EXOSC3-204ENST00000465860 MEI1Q5TIA1 1274 aa6.14□□□□□ -1.43
EXOSC3-204ENST00000465860 CDKAL1Q5VV42 579 aa6.14□□□□□ -1.43
EXOSC3-204ENST00000465860 LETMD1Q6P1Q0 360 aa6.14□□□□□ -1.43
EXOSC3-204ENST00000465860 PPP1R42Q7Z4L9 355 aa6.14□□□□□ -1.43
EXOSC3-204ENST00000465860 TRMT2AQ8IZ69 625 aaKnown RBP6.14□□□□□ -1.43
EXOSC3-204ENST00000465860 MFSD4AQ8N468 514 aa6.14□□□□□ -1.43
EXOSC3-204ENST00000465860 CARS2Q9HA77 564 aaKnown RBP6.14□□□□□ -1.43
EXOSC3-204ENST00000465860 ATP13A1Q9HD20 1204 aa6.14□□□□□ -1.43
EXOSC3-204ENST00000465860 CTNND2Q9UQB3 1225 aa6.14□□□□□ -1.43
EXOSC3-204ENST00000465860 CAPN6Q9Y6Q1 641 aa6.14□□□□□ -1.43
EXOSC3-204ENST00000465860 ABCC4O15439 1325 aa6.14□□□□□ -1.43
EXOSC3-204ENST00000465860 A0A1B0GUL6 1792 aa6.13□□□□□ -1.43
EXOSC3-204ENST00000465860 WTIPA6NIX2 430 aaPredicted RBP6.13□□□□□ -1.43
EXOSC3-204ENST00000465860 FAM155AB1AL88 458 aaPredicted RBP6.13□□□□□ -1.43
EXOSC3-204ENST00000465860 FARP2O94887 1054 aaPredicted RBP6.13□□□□□ -1.43
EXOSC3-204ENST00000465860 LMNB1P20700 586 aa6.13□□□□□ -1.43
EXOSC3-204ENST00000465860 ZNF124Q15973 351 aa6.13□□□□□ -1.43
EXOSC3-204ENST00000465860 KSR2Q6VAB6 950 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms