RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 RRAGAQ7L523 313 aa21.8■■□□□ 1.08
SDF4-205ENST00000465727 GIMAP7Q8NHV1 300 aa21.8■■□□□ 1.08
SDF4-205ENST00000465727 IFT81Q8WYA0 676 aa21.8■■□□□ 1.08
SDF4-205ENST00000465727 ROBO1Q9Y6N7 1651 aa21.8■■□□□ 1.08
SDF4-205ENST00000465727 CASZ1Q86V15 1759 aa21.79■■□□□ 1.08
SDF4-205ENST00000465727 ATF3P18847 181 aa21.79■■□□□ 1.08
SDF4-205ENST00000465727 HDLBPQ00341 1268 aaKnown RBP21.79■■□□□ 1.08
SDF4-205ENST00000465727 CDC37Q16543 378 aaPredicted RBP21.79■■□□□ 1.08
SDF4-205ENST00000465727 BAP1Q92560 729 aa21.79■■□□□ 1.08
SDF4-205ENST00000465727 EEF2KMTQ96G04 330 aa21.79■■□□□ 1.08
SDF4-205ENST00000465727 MMRN2Q9H8L6 949 aa21.79■■□□□ 1.08
SDF4-205ENST00000465727 PLCB1Q9NQ66 1216 aa21.79■■□□□ 1.08
SDF4-205ENST00000465727 EPHB6O15197 1021 aa21.79■■□□□ 1.08
SDF4-205ENST00000465727 PDXDC1Q6P996 788 aa21.79■■□□□ 1.08
SDF4-205ENST00000465727 ARMC9Q7Z3E5 817 aa21.79■■□□□ 1.08
SDF4-205ENST00000465727 ZNF34Q8IZ26 560 aa21.79■■□□□ 1.08
SDF4-205ENST00000465727 SYN2Q92777 582 aaPredicted RBP21.79■■□□□ 1.08
SDF4-205ENST00000465727 TMBIM4Q9HC24 238 aa21.79■■□□□ 1.08
SDF4-205ENST00000465727 ZNF804BA4D1E1 1349 aa21.79■■□□□ 1.08
SDF4-205ENST00000465727 E7EVH7 732 aa21.78■■□□□ 1.08
SDF4-205ENST00000465727 CES2O00748 559 aa21.78■■□□□ 1.08
SDF4-205ENST00000465727 TNNC1P63316 161 aa21.78■■□□□ 1.08
SDF4-205ENST00000465727 RASSF7Q02833 373 aa21.78■■□□□ 1.08
SDF4-205ENST00000465727 CCDC121Q6ZUS5 278 aa21.78■■□□□ 1.08
SDF4-205ENST00000465727 TAX1BP1Q86VP1 789 aa21.78■■□□□ 1.08
SDF4-205ENST00000465727 LRRC15Q8TF66 581 aa21.78■■□□□ 1.08
SDF4-205ENST00000465727 DDX17Q92841 729 aaKnown RBP21.78■■□□□ 1.08
SDF4-205ENST00000465727 MS4A14Q96JA4 679 aa21.78■■□□□ 1.08
SDF4-205ENST00000465727 PLIN2Q99541 437 aa21.78■■□□□ 1.08
SDF4-205ENST00000465727 SEMA6BQ9H3T3 888 aa21.78■■□□□ 1.08
SDF4-205ENST00000465727 ABCF2Q9UG63 623 aa21.78■■□□□ 1.08
SDF4-205ENST00000465727 COL5A2P05997 1499 aaPredicted RBP21.78■■□□□ 1.08
SDF4-205ENST00000465727 CYP2D7A0A087X1C5 515 aa21.78■■□□□ 1.08
SDF4-205ENST00000465727 VEGFAP15692 232 aaPredicted RBP21.78■■□□□ 1.08
SDF4-205ENST00000465727 IGHMBP2P38935 993 aaKnown RBP21.78■■□□□ 1.08
SDF4-205ENST00000465727 NT5C2P49902 561 aa21.78■■□□□ 1.08
SDF4-205ENST00000465727 IFT88Q13099 833 aa21.78■■□□□ 1.08
SDF4-205ENST00000465727 WLSQ5T9L3 541 aa21.78■■□□□ 1.08
SDF4-205ENST00000465727 FOXR2Q6PJQ5 311 aa21.78■■□□□ 1.08
SDF4-205ENST00000465727 MAGEC3Q8TD91 643 aa21.78■■□□□ 1.08
SDF4-205ENST00000465727 CASKIN2Q8WXE0 1202 aa21.78■■□□□ 1.08
SDF4-205ENST00000465727 CYFIP2Q96F07 1278 aa21.78■■□□□ 1.08
SDF4-205ENST00000465727 CARD10Q9BWT7 1032 aa21.78■■□□□ 1.08
SDF4-205ENST00000465727 ASAP1Q9ULH1 1129 aa21.78■■□□□ 1.08
SDF4-205ENST00000465727 PCDHA6Q9UN73 950 aa21.78■■□□□ 1.08
SDF4-205ENST00000465727 PCDHA8Q9Y5H6 950 aa21.78■■□□□ 1.08
SDF4-205ENST00000465727 FCER1AP12319 257 aa21.77■■□□□ 1.08
SDF4-205ENST00000465727 SLC1A4P43007 532 aa21.77■■□□□ 1.08
SDF4-205ENST00000465727 SEC24CP53992 1094 aa21.77■■□□□ 1.08
SDF4-205ENST00000465727 LRRC63Q05C16 580 aa21.77■■□□□ 1.08
SDF4-205ENST00000465727 GFPT1Q06210 699 aaPredicted RBP21.77■■□□□ 1.08
SDF4-205ENST00000465727 BIRC3Q13489 604 aa21.77■■□□□ 1.08
SDF4-205ENST00000465727 KIAA0895Q8NCT3 520 aa21.77■■□□□ 1.08
SDF4-205ENST00000465727 MCM8Q9UJA3 840 aa21.77■■□□□ 1.08
SDF4-205ENST00000465727 PLAAQ9Y263 795 aa21.77■■□□□ 1.08
SDF4-205ENST00000465727 GCOM1H8Y6P7 765 aaPredicted RBP21.76■■□□□ 1.07
SDF4-205ENST00000465727 MYZAPP0CAP1 466 aa21.76■■□□□ 1.07
SDF4-205ENST00000465727 MYBP10242 640 aa21.76■■□□□ 1.07
SDF4-205ENST00000465727 GUCY2FP51841 1108 aa21.76■■□□□ 1.07
SDF4-205ENST00000465727 SLC9C1Q4G0N8 1177 aa21.76■■□□□ 1.07
SDF4-205ENST00000465727 CEP85LQ5SZL2 805 aa21.76■■□□□ 1.07
SDF4-205ENST00000465727 CACNA2D4Q7Z3S7 1137 aa21.76■■□□□ 1.07
SDF4-205ENST00000465727 MAATS1Q7Z4T9 603 aa21.76■■□□□ 1.07
SDF4-205ENST00000465727 P3H4Q92791 437 aa21.76■■□□□ 1.07
SDF4-205ENST00000465727 INPP4AQ96PE3 977 aaPredicted RBP21.76■■□□□ 1.07
SDF4-205ENST00000465727 TAF1DQ9H5J8 278 aaPredicted RBP21.76■■□□□ 1.07
SDF4-205ENST00000465727 SLC40A1Q9NP59 571 aa21.76■■□□□ 1.07
SDF4-205ENST00000465727 SLAIN2Q9P270 581 aa21.76■■□□□ 1.07
SDF4-205ENST00000465727 PCDHGC5Q9Y5F6 944 aa21.76■■□□□ 1.07
SDF4-205ENST00000465727 ESYT3A0FGR9 886 aa21.76■■□□□ 1.07
SDF4-205ENST00000465727 BUB1O43683 1085 aa21.76■■□□□ 1.07
SDF4-205ENST00000465727 GNAQP50148 359 aa21.76■■□□□ 1.07
SDF4-205ENST00000465727 CUL1Q13616 776 aa21.76■■□□□ 1.07
SDF4-205ENST00000465727 NAB2Q15742 525 aa21.76■■□□□ 1.07
SDF4-205ENST00000465727 MEI1Q5TIA1 1274 aa21.76■■□□□ 1.07
SDF4-205ENST00000465727 HGSNATQ68CP4 663 aa21.76■■□□□ 1.07
SDF4-205ENST00000465727 RUFY4Q6ZNE9 571 aa21.76■■□□□ 1.07
SDF4-205ENST00000465727 LRRC45Q96CN5 670 aa21.76■■□□□ 1.07
SDF4-205ENST00000465727 KRT12Q99456 494 aa21.76■■□□□ 1.07
SDF4-205ENST00000465727 ISCUQ9H1K1 167 aa21.76■■□□□ 1.07
SDF4-205ENST00000465727 CD248Q9HCU0 757 aa21.76■■□□□ 1.07
SDF4-205ENST00000465727 GMNCA6NCL1 334 aa21.75■■□□□ 1.07
SDF4-205ENST00000465727 ZSCAN5CA6NGD5 496 aaPredicted RBP21.75■■□□□ 1.07
SDF4-205ENST00000465727 USP17L12C9JPN9 530 aa21.75■■□□□ 1.07
SDF4-205ENST00000465727 USP17L21D6R901 530 aa21.75■■□□□ 1.07
SDF4-205ENST00000465727 OR52Z1P0C646 297 aa21.75■■□□□ 1.07
SDF4-205ENST00000465727 CYP19A1P11511 503 aaPredicted RBP21.75■■□□□ 1.07
SDF4-205ENST00000465727 INF2Q27J81 1249 aa21.75■■□□□ 1.07
SDF4-205ENST00000465727 ANKRD13CQ8N6S4 541 aa21.75■■□□□ 1.07
SDF4-205ENST00000465727 RASGRP4Q8TDF6 673 aa21.75■■□□□ 1.07
SDF4-205ENST00000465727 PVALEFA0A1B0GWK0 134 aa21.75■■□□□ 1.07
SDF4-205ENST00000465727 PALMO75781 387 aa21.75■■□□□ 1.07
SDF4-205ENST00000465727 SERPING1P05155 500 aa21.75■■□□□ 1.07
SDF4-205ENST00000465727 TXNRD1Q16881 649 aa21.75■■□□□ 1.07
SDF4-205ENST00000465727 CCDC152Q4G0S7 254 aa21.75■■□□□ 1.07
SDF4-205ENST00000465727 GUF1Q8N442 669 aaKnown RBP21.75■■□□□ 1.07
SDF4-205ENST00000465727 PIGBQ92521 554 aa21.75■■□□□ 1.07
SDF4-205ENST00000465727 GPKOWQ92917 476 aaPredicted RBP eCLIP21.75■■□□□ 1.07
SDF4-205ENST00000465727 SUFUQ9UMX1 484 aa21.75■■□□□ 1.07
SDF4-205ENST00000465727 TRAPPC3O43617 180 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms