RNA–Protein interactions for RNA: ENST00000465673.5

GPNMB-206, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-206ENST00000465673 NMIQ13287 307 aaPredicted RBP12.1□□□□□ -0.47
GPNMB-206ENST00000465673 HIC1Q14526 733 aa12.1□□□□□ -0.47
GPNMB-206ENST00000465673 MCMDC2Q4G0Z9 681 aa12.1□□□□□ -0.47
GPNMB-206ENST00000465673 TMEM31Q5JXX7 168 aa12.1□□□□□ -0.47
GPNMB-206ENST00000465673 AFAP1L1Q8TED9 768 aa12.1□□□□□ -0.47
GPNMB-206ENST00000465673 NEDD4P46934 1319 aa12.1□□□□□ -0.47
GPNMB-206ENST00000465673 LINC01553A4QN01 128 aa12.09□□□□□ -0.47
GPNMB-206ENST00000465673 ZNF286BP0CG31 522 aa12.09□□□□□ -0.47
GPNMB-206ENST00000465673 PDE1AP54750 535 aa12.09□□□□□ -0.47
GPNMB-206ENST00000465673 MBTPS1Q14703 1052 aa12.09□□□□□ -0.47
GPNMB-206ENST00000465673 CDC37Q16543 378 aaPredicted RBP12.09□□□□□ -0.47
GPNMB-206ENST00000465673 CNKSR3Q6P9H4 555 aa12.09□□□□□ -0.47
GPNMB-206ENST00000465673 TRAF7Q6Q0C0 670 aa12.09□□□□□ -0.47
GPNMB-206ENST00000465673 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.09□□□□□ -0.47
GPNMB-206ENST00000465673 MFSD6Q6ZSS7 791 aa12.09□□□□□ -0.47
GPNMB-206ENST00000465673 SESTD1Q86VW0 696 aa12.09□□□□□ -0.47
GPNMB-206ENST00000465673 CAGE1Q8TC20 777 aa12.09□□□□□ -0.47
GPNMB-206ENST00000465673 TTC14Q96N46 770 aa12.09□□□□□ -0.47
GPNMB-206ENST00000465673 MPHOSPH6Q99547 160 aaKnown RBP12.09□□□□□ -0.47
GPNMB-206ENST00000465673 VAT1LQ9HCJ6 419 aa12.09□□□□□ -0.47
GPNMB-206ENST00000465673 GJB5O95377 273 aa12.08□□□□□ -0.48
GPNMB-206ENST00000465673 CXCL10P02778 98 aa12.08□□□□□ -0.48
GPNMB-206ENST00000465673 EIF2AK2P19525 551 aaKnown RBP12.08□□□□□ -0.48
GPNMB-206ENST00000465673 CASTP20810 708 aaKnown RBP12.08□□□□□ -0.48
GPNMB-206ENST00000465673 PSEN2P49810 448 aa12.08□□□□□ -0.48
GPNMB-206ENST00000465673 TRIM71Q2Q1W2 868 aaKnown RBP12.08□□□□□ -0.48
GPNMB-206ENST00000465673 ZNF618Q5T7W0 954 aa12.08□□□□□ -0.48
GPNMB-206ENST00000465673 ADGRF4Q8IZF3 695 aa12.08□□□□□ -0.48
GPNMB-206ENST00000465673 CCDC155Q8N6L0 562 aa12.08□□□□□ -0.48
GPNMB-206ENST00000465673 C7orf31Q8N865 590 aa12.08□□□□□ -0.48
GPNMB-206ENST00000465673 RGS22Q8NE09 1264 aa12.08□□□□□ -0.48
GPNMB-206ENST00000465673 ZFP91Q96JP5 570 aaPredicted RBP12.08□□□□□ -0.48
GPNMB-206ENST00000465673 RMDN3Q96TC7 470 aa12.08□□□□□ -0.48
GPNMB-206ENST00000465673 OSBPL7Q9BZF2 842 aa12.08□□□□□ -0.48
GPNMB-206ENST00000465673 GTF2IRD1Q9UHL9 959 aa12.08□□□□□ -0.48
GPNMB-206ENST00000465673 DDX41Q9UJV9 622 aaKnown RBP12.08□□□□□ -0.48
GPNMB-206ENST00000465673 KCNA5P22460 613 aa12.07□□□□□ -0.48
GPNMB-206ENST00000465673 ERVK-21P61565 698 aa12.07□□□□□ -0.48
GPNMB-206ENST00000465673 MFSD10Q14728 455 aa12.07□□□□□ -0.48
GPNMB-206ENST00000465673 STXBP2Q15833 593 aa12.07□□□□□ -0.48
GPNMB-206ENST00000465673 DGKDQ16760 1214 aa12.07□□□□□ -0.48
GPNMB-206ENST00000465673 KIAA0753Q2KHM9 967 aa12.07□□□□□ -0.48
GPNMB-206ENST00000465673 QRICH1Q2TAL8 776 aa12.07□□□□□ -0.48
GPNMB-206ENST00000465673 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.07□□□□□ -0.48
GPNMB-206ENST00000465673 NSUN6Q8TEA1 469 aaKnown RBP12.07□□□□□ -0.48
GPNMB-206ENST00000465673 TGS1Q96RS0 853 aaKnown RBP12.07□□□□□ -0.48
GPNMB-206ENST00000465673 RAD9AQ99638 391 aa12.07□□□□□ -0.48
GPNMB-206ENST00000465673 C17orf80Q9BSJ5 609 aa12.07□□□□□ -0.48
GPNMB-206ENST00000465673 UBE2ZQ9H832 354 aaPredicted RBP12.07□□□□□ -0.48
GPNMB-206ENST00000465673 PNMA2Q9UL42 364 aa12.07□□□□□ -0.48
GPNMB-206ENST00000465673 HCN4Q9Y3Q4 1203 aa12.07□□□□□ -0.48
GPNMB-206ENST00000465673 CCDC171Q6TFL3 1326 aa12.07□□□□□ -0.48
GPNMB-206ENST00000465673 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.06□□□□□ -0.48
GPNMB-206ENST00000465673 ABHD14A-ACY1A0A1B0GW23 586 aa12.06□□□□□ -0.48
GPNMB-206ENST00000465673 B4DLN1 442 aa12.06□□□□□ -0.48
GPNMB-206ENST00000465673 OPLAHO14841 1288 aa12.06□□□□□ -0.48
GPNMB-206ENST00000465673 GPR37L1O60883 481 aa12.06□□□□□ -0.48
GPNMB-206ENST00000465673 KDM4AO75164 1064 aa12.06□□□□□ -0.48
GPNMB-206ENST00000465673 NR3C2P08235 984 aa12.06□□□□□ -0.48
GPNMB-206ENST00000465673 IL9P15248 144 aa12.06□□□□□ -0.48
GPNMB-206ENST00000465673 MRPL12P52815 198 aaKnown RBP12.06□□□□□ -0.48
GPNMB-206ENST00000465673 RBL2Q08999 1139 aa12.06□□□□□ -0.48
GPNMB-206ENST00000465673 GPATCH4Q5T3I0 446 aaKnown RBP12.06□□□□□ -0.48
GPNMB-206ENST00000465673 ARHGEF16Q5VV41 709 aa12.06□□□□□ -0.48
GPNMB-206ENST00000465673 PNMA1Q8ND90 353 aa12.06□□□□□ -0.48
GPNMB-206ENST00000465673 CRBNQ96SW2 442 aa12.06□□□□□ -0.48
GPNMB-206ENST00000465673 BCAS3Q9H6U6 928 aa12.06□□□□□ -0.48
GPNMB-206ENST00000465673 JMJD4Q9H9V9 463 aa12.06□□□□□ -0.48
GPNMB-206ENST00000465673 MRVI1Q9Y6F6 885 aa12.06□□□□□ -0.48
GPNMB-206ENST00000465673 ABCB11O95342 1321 aa12.06□□□□□ -0.48
GPNMB-206ENST00000465673 TRIM6-TRIM34B2RNG4 842 aa12.05□□□□□ -0.48
GPNMB-206ENST00000465673 B4E1Z4 1266 aa12.05□□□□□ -0.48
GPNMB-206ENST00000465673 PI4K2BG5E9Z4 385 aa12.05□□□□□ -0.48
GPNMB-206ENST00000465673 HAS3O00219 553 aa12.05□□□□□ -0.48
GPNMB-206ENST00000465673 DHX16O60231 1041 aaKnown RBP12.05□□□□□ -0.48
GPNMB-206ENST00000465673 RGS20O76081 388 aa12.05□□□□□ -0.48
GPNMB-206ENST00000465673 F2P00734 622 aa12.05□□□□□ -0.48
GPNMB-206ENST00000465673 CFBP00751 764 aa12.05□□□□□ -0.48
GPNMB-206ENST00000465673 MYCLP12524 364 aaPredicted RBP12.05□□□□□ -0.48
GPNMB-206ENST00000465673 PTK7Q13308 1070 aa12.05□□□□□ -0.48
GPNMB-206ENST00000465673 IKBKEQ14164 716 aa12.05□□□□□ -0.48
GPNMB-206ENST00000465673 HSDL1Q3SXM5 330 aa12.05□□□□□ -0.48
GPNMB-206ENST00000465673 DGKHQ86XP1 1220 aa12.05□□□□□ -0.48
GPNMB-206ENST00000465673 DHX37Q8IY37 1157 aaKnown RBP12.05□□□□□ -0.48
GPNMB-206ENST00000465673 STAG2Q8N3U4 1231 aa12.05□□□□□ -0.48
GPNMB-206ENST00000465673 DBF4BQ8NFT6 615 aa12.05□□□□□ -0.48
GPNMB-206ENST00000465673 ESR2Q92731 530 aa12.05□□□□□ -0.48
GPNMB-206ENST00000465673 GPKOWQ92917 476 aaPredicted RBP eCLIP12.05□□□□□ -0.48
GPNMB-206ENST00000465673 RILPL2Q969X0 211 aa12.05□□□□□ -0.48
GPNMB-206ENST00000465673 IWS1Q96ST2 819 aa12.05□□□□□ -0.48
GPNMB-206ENST00000465673 PXMP2Q9NR77 195 aa12.05□□□□□ -0.48
GPNMB-206ENST00000465673 LMCD1Q9NZU5 365 aa12.05□□□□□ -0.48
GPNMB-206ENST00000465673 ZMYM6O95789 1325 aa12.05□□□□□ -0.48
GPNMB-206ENST00000465673 KIAA1217Q5T5P2 1943 aa12.04□□□□□ -0.48
GPNMB-206ENST00000465673 MUC6Q6W4X9 2439 aa12.04□□□□□ -0.48
GPNMB-206ENST00000465673 H3BQ06 376 aaPredicted RBP12.04□□□□□ -0.48
GPNMB-206ENST00000465673 PPP1R11O60927 126 aaPredicted RBP12.04□□□□□ -0.48
GPNMB-206ENST00000465673 LGR5O75473 907 aa12.04□□□□□ -0.48
GPNMB-206ENST00000465673 EIF3JO75822 258 aaKnown RBP12.04□□□□□ -0.48
GPNMB-206ENST00000465673 HOXA13P31271 388 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms