RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 CALM2P0DP24 149 aa25.18■■□□□ 1.62
LIME1-203ENST00000465591 CALM3P0DP25 149 aa25.18■■□□□ 1.62
LIME1-203ENST00000465591 GNAQP50148 359 aa25.18■■□□□ 1.62
LIME1-203ENST00000465591 MFSD5Q6N075 450 aa25.18■■□□□ 1.62
LIME1-203ENST00000465591 TMTC3Q6ZXV5 915 aa25.18■■□□□ 1.62
LIME1-203ENST00000465591 Q7L0L9 218 aa25.18■■□□□ 1.62
LIME1-203ENST00000465591 DHX32Q7L7V1 743 aaKnown RBP25.18■■□□□ 1.62
LIME1-203ENST00000465591 VSIG10LQ86VR7 867 aa25.18■■□□□ 1.62
LIME1-203ENST00000465591 FANCBQ8NB91 859 aa25.18■■□□□ 1.62
LIME1-203ENST00000465591 KCNB2Q92953 911 aa25.18■■□□□ 1.62
LIME1-203ENST00000465591 MTG1Q9BT17 334 aaPredicted RBP25.18■■□□□ 1.62
LIME1-203ENST00000465591 GH1P01241 217 aa25.17■■□□□ 1.62
LIME1-203ENST00000465591 CPA1P15085 419 aa25.17■■□□□ 1.62
LIME1-203ENST00000465591 APOA5Q6Q788 366 aa25.17■■□□□ 1.62
LIME1-203ENST00000465591 CCDC82Q8N4S0 544 aa25.17■■□□□ 1.62
LIME1-203ENST00000465591 ALDH8A1Q9H2A2 487 aaPredicted RBP25.17■■□□□ 1.62
LIME1-203ENST00000465591 MMP3P08254 477 aa25.16■■□□□ 1.62
LIME1-203ENST00000465591 CYP2C18P33260 490 aa25.16■■□□□ 1.62
LIME1-203ENST00000465591 NBPF20Q3BBV1 942 aa25.16■■□□□ 1.62
LIME1-203ENST00000465591 GPR153Q6NV75 609 aa25.16■■□□□ 1.62
LIME1-203ENST00000465591 USP17L6PQ6QN14 398 aa25.16■■□□□ 1.62
LIME1-203ENST00000465591 C16orf59Q7L2K0 433 aa25.16■■□□□ 1.62
LIME1-203ENST00000465591 GPKOWQ92917 476 aaPredicted RBP eCLIP25.16■■□□□ 1.62
LIME1-203ENST00000465591 TRMT13Q9NUP7 481 aaKnown RBP25.16■■□□□ 1.62
LIME1-203ENST00000465591 MRVI1Q9Y6F6 885 aa25.16■■□□□ 1.62
LIME1-203ENST00000465591 FRMPD4Q14CM0 1322 aa25.15■■□□□ 1.62
LIME1-203ENST00000465591 DOCK5Q9H7D0 1870 aa25.15■■□□□ 1.62
LIME1-203ENST00000465591 CSF2RAP15509 400 aa25.15■■□□□ 1.62
LIME1-203ENST00000465591 HSPA4P34932 840 aa25.15■■□□□ 1.62
LIME1-203ENST00000465591 BRDTQ58F21 947 aaPredicted RBP25.15■■□□□ 1.62
LIME1-203ENST00000465591 SEC63Q9UGP8 760 aaKnown RBP25.15■■□□□ 1.62
LIME1-203ENST00000465591 MEIS2O14770 477 aa25.14■■□□□ 1.62
LIME1-203ENST00000465591 KRT32Q14532 448 aa25.14■■□□□ 1.62
LIME1-203ENST00000465591 NOC4LQ9BVI4 516 aaKnown RBP25.14■■□□□ 1.62
LIME1-203ENST00000465591 SEZ6LQ9BYH1 1024 aa25.14■■□□□ 1.62
LIME1-203ENST00000465591 SNX14Q9Y5W7 946 aa25.14■■□□□ 1.62
LIME1-203ENST00000465591 SORBS3O60504 671 aa25.13■■□□□ 1.61
LIME1-203ENST00000465591 KPNA6O60684 536 aa25.13■■□□□ 1.61
LIME1-203ENST00000465591 CCND2P30279 289 aa25.13■■□□□ 1.61
LIME1-203ENST00000465591 MRPS9P82933 396 aaKnown RBP25.13■■□□□ 1.61
LIME1-203ENST00000465591 SP2Q02086 613 aa25.13■■□□□ 1.61
LIME1-203ENST00000465591 DEFB123Q8N688 67 aa25.13■■□□□ 1.61
LIME1-203ENST00000465591 KAT2BQ92831 832 aa25.13■■□□□ 1.61
LIME1-203ENST00000465591 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.13■■□□□ 1.615e-7■■□□□ 13.7
LIME1-203ENST00000465591 HIPK3Q9H422 1215 aa25.13■■□□□ 1.61
LIME1-203ENST00000465591 CNTNAP5Q8WYK1 1306 aa25.12■■□□□ 1.61
LIME1-203ENST00000465591 CYP2C9P11712 490 aa25.12■■□□□ 1.61
LIME1-203ENST00000465591 FUT2Q10981 343 aa25.12■■□□□ 1.61
LIME1-203ENST00000465591 EMID1Q96A84 441 aaPredicted RBP25.12■■□□□ 1.61
LIME1-203ENST00000465591 RNPC3Q96LT9 517 aaKnown RBP25.12■■□□□ 1.61
LIME1-203ENST00000465591 WNT8AQ9H1J5 351 aa25.12■■□□□ 1.61
LIME1-203ENST00000465591 BCAS3Q9H6U6 928 aa25.12■■□□□ 1.61
LIME1-203ENST00000465591 FAM217BQ9NTX9 383 aaPredicted RBP25.12■■□□□ 1.61
LIME1-203ENST00000465591 SCN5AQ14524 2016 aa25.12■■□□□ 1.61
LIME1-203ENST00000465591 PIK3CDO00329 1044 aa25.11■■□□□ 1.61
LIME1-203ENST00000465591 ACRP10323 421 aa25.11■■□□□ 1.61
LIME1-203ENST00000465591 UBA1P22314 1058 aaKnown RBP25.11■■□□□ 1.61
LIME1-203ENST00000465591 PPIGQ13427 754 aaKnown RBP eCLIP25.11■■□□□ 1.616e-9■■■■□ 19.6
LIME1-203ENST00000465591 FAM47CQ5HY64 1035 aa25.11■■□□□ 1.61
LIME1-203ENST00000465591 TMEM240Q5SV17 173 aa25.11■■□□□ 1.61
LIME1-203ENST00000465591 SYNE3Q6ZMZ3 975 aa25.11■■□□□ 1.61
LIME1-203ENST00000465591 JAKMIP1Q96N16 626 aaKnown RBP25.11■■□□□ 1.61
LIME1-203ENST00000465591 TRIP12Q14669 1992 aaPredicted RBP25.11■■□□□ 1.61
LIME1-203ENST00000465591 KLF18A0A0U1RQI7 1052 aa25.1■■□□□ 1.61
LIME1-203ENST00000465591 ZBTB43O43298 467 aa25.1■■□□□ 1.61
LIME1-203ENST00000465591 CCL23P55773 120 aa25.1■■□□□ 1.61
LIME1-203ENST00000465591 CHMP4BP1P59074 171 aa25.1■■□□□ 1.61
LIME1-203ENST00000465591 SEMA3FQ13275 785 aa25.1■■□□□ 1.61
LIME1-203ENST00000465591 RTN1Q16799 776 aa25.1■■□□□ 1.61
LIME1-203ENST00000465591 MYSM1Q5VVJ2 828 aa25.1■■□□□ 1.61
LIME1-203ENST00000465591 NFRKBQ6P4R8 1299 aa25.1■■□□□ 1.61
LIME1-203ENST00000465591 DHX37Q8IY37 1157 aaKnown RBP25.1■■□□□ 1.61
LIME1-203ENST00000465591 TMEM199Q8N511 208 aa25.1■■□□□ 1.61
LIME1-203ENST00000465591 SMARCC2Q8TAQ2 1214 aa25.1■■□□□ 1.61
LIME1-203ENST00000465591 PPP4R2Q9NY27 417 aa25.1■■□□□ 1.61
LIME1-203ENST00000465591 GGPS1O95749 300 aa25.09■■□□□ 1.61
LIME1-203ENST00000465591 CDC27P30260 824 aa25.09■■□□□ 1.61
LIME1-203ENST00000465591 LAMC2Q13753 1193 aa25.09■■□□□ 1.61
LIME1-203ENST00000465591 CELF3Q5SZQ8 465 aaKnown RBP25.09■■□□□ 1.61
LIME1-203ENST00000465591 TYW1BQ6NUM6 668 aa25.09■■□□□ 1.61
LIME1-203ENST00000465591 PPTC7Q8NI37 304 aa25.09■■□□□ 1.61
LIME1-203ENST00000465591 VWCEQ96DN2 955 aa25.09■■□□□ 1.61
LIME1-203ENST00000465591 INPP4AQ96PE3 977 aaPredicted RBP25.09■■□□□ 1.61
LIME1-203ENST00000465591 RBM28Q9NW13 759 aaKnown RBP25.09■■□□□ 1.61
LIME1-203ENST00000465591 MTMR10Q9NXD2 777 aa25.09■■□□□ 1.61
LIME1-203ENST00000465591 RTEL1Q9NZ71 1219 aa25.09■■□□□ 1.61
LIME1-203ENST00000465591 GOLGA8AA7E2F4 631 aa25.08■■□□□ 1.61
LIME1-203ENST00000465591 GOLGA8BA8MQT2 603 aa25.08■■□□□ 1.61
LIME1-203ENST00000465591 HMGB1P09429 215 aaKnown RBP25.08■■□□□ 1.61
LIME1-203ENST00000465591 ZNF286BP0CG31 522 aa25.08■■□□□ 1.61
LIME1-203ENST00000465591 APOBRQ0VD83 1088 aa25.08■■□□□ 1.61
LIME1-203ENST00000465591 DGKDQ16760 1214 aa25.08■■□□□ 1.61
LIME1-203ENST00000465591 UBE2SQ16763 222 aa25.08■■□□□ 1.61
LIME1-203ENST00000465591 HSDL1Q3SXM5 330 aa25.08■■□□□ 1.61
LIME1-203ENST00000465591 WWC2Q6AWC2 1192 aa25.08■■□□□ 1.61
LIME1-203ENST00000465591 Q6ZUG5 572 aa25.08■■□□□ 1.61
LIME1-203ENST00000465591 ZNF365Q70YC5 407 aa25.08■■□□□ 1.61
LIME1-203ENST00000465591 HEATR3Q7Z4Q2 680 aa25.08■■□□□ 1.61
LIME1-203ENST00000465591 CUL5Q93034 780 aa25.08■■□□□ 1.61
LIME1-203ENST00000465591 SCLYQ96I15 445 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms