RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 TNFAIP2Q03169 654 aa19.38■□□□□ 0.69
USP39-211ENST00000465282 GNPTABQ3T906 1256 aa19.38■□□□□ 0.69
USP39-211ENST00000465282 EEPD1Q7L9B9 569 aa19.38■□□□□ 0.69
USP39-211ENST00000465282 FBXO16Q8IX29 292 aaPredicted RBP19.38■□□□□ 0.69
USP39-211ENST00000465282 BLIDQ8IZY5 108 aa19.38■□□□□ 0.69
USP39-211ENST00000465282 FAM184AQ8NB25 1140 aa19.38■□□□□ 0.69
USP39-211ENST00000465282 SHISA4Q96DD7 197 aa19.38■□□□□ 0.69
USP39-211ENST00000465282 ANO3Q9BYT9 981 aa19.38■□□□□ 0.69
USP39-211ENST00000465282 MYH7BA7E2Y1 1941 aa19.37■□□□□ 0.69
USP39-211ENST00000465282 TFRCP02786 760 aaKnown RBP19.37■□□□□ 0.69
USP39-211ENST00000465282 SREBF1P36956 1147 aa19.37■□□□□ 0.69
USP39-211ENST00000465282 CUL4AQ13619 759 aa19.37■□□□□ 0.69
USP39-211ENST00000465282 TTLL4Q14679 1199 aa19.37■□□□□ 0.69
USP39-211ENST00000465282 ARRDC4Q8NCT1 418 aa19.37■□□□□ 0.69
USP39-211ENST00000465282 WDR11Q9BZH6 1224 aa19.37■□□□□ 0.69
USP39-211ENST00000465282 BRMS1Q9HCU9 246 aa19.37■□□□□ 0.69
USP39-211ENST00000465282 K7ELQ4 463 aaPredicted RBP19.36■□□□□ 0.69
USP39-211ENST00000465282 ADCYAP1R1P41586 468 aa19.36■□□□□ 0.69
USP39-211ENST00000465282 MRPS9P82933 396 aaKnown RBP19.36■□□□□ 0.69
USP39-211ENST00000465282 DUSP28Q4G0W2 176 aa19.36■□□□□ 0.69
USP39-211ENST00000465282 JAKMIP3Q5VZ66 844 aa19.36■□□□□ 0.69
USP39-211ENST00000465282 IL31RAQ8NI17 732 aa19.36■□□□□ 0.69
USP39-211ENST00000465282 INPP4AQ96PE3 977 aaPredicted RBP19.36■□□□□ 0.69
USP39-211ENST00000465282 SPC25Q9HBM1 224 aa19.36■□□□□ 0.69
USP39-211ENST00000465282 XPNPEP3Q9NQH7 507 aa19.36■□□□□ 0.69
USP39-211ENST00000465282 PDGFCQ9NRA1 345 aa19.36■□□□□ 0.69
USP39-211ENST00000465282 DDX49Q9Y6V7 483 aaKnown RBP19.36■□□□□ 0.69
USP39-211ENST00000465282 POTEFA5A3E0 1075 aa19.35■□□□□ 0.69
USP39-211ENST00000465282 M0R2N6 131 aa19.35■□□□□ 0.69
USP39-211ENST00000465282 MAFGO15525 162 aa19.35■□□□□ 0.69
USP39-211ENST00000465282 CYP3A4P08684 503 aa19.35■□□□□ 0.69
USP39-211ENST00000465282 ICAM3P32942 547 aa19.35■□□□□ 0.69
USP39-211ENST00000465282 NKX3-2P78367 333 aa19.35■□□□□ 0.69
USP39-211ENST00000465282 NPY5RQ15761 445 aa19.35■□□□□ 0.69
USP39-211ENST00000465282 CCDC62Q6P9F0 684 aa19.35■□□□□ 0.69
USP39-211ENST00000465282 NLRX1Q86UT6 975 aa19.35■□□□□ 0.69
USP39-211ENST00000465282 INTS4Q96HW7 963 aaKnown RBP19.35■□□□□ 0.69
USP39-211ENST00000465282 CDHR1Q96JP9 859 aa19.35■□□□□ 0.69
USP39-211ENST00000465282 C8orf76Q96K31 380 aa19.35■□□□□ 0.69
USP39-211ENST00000465282 TMEM260Q9NX78 707 aa19.35■□□□□ 0.69
USP39-211ENST00000465282 KCNJ14Q9UNX9 436 aa19.35■□□□□ 0.69
USP39-211ENST00000465282 GNEQ9Y223 722 aaKnown RBP19.35■□□□□ 0.69
USP39-211ENST00000465282 MMP1P03956 469 aa19.34■□□□□ 0.69
USP39-211ENST00000465282 GJA9P57773 515 aa19.34■□□□□ 0.69
USP39-211ENST00000465282 SAFBQ15424 915 aaKnown RBP eCLIP19.34■□□□□ 0.69
USP39-211ENST00000465282 SEPT14Q6ZU15 432 aa19.34■□□□□ 0.69
USP39-211ENST00000465282 KRT25Q7Z3Z0 450 aa19.34■□□□□ 0.69
USP39-211ENST00000465282 RNF180Q86T96 592 aa19.34■□□□□ 0.69
USP39-211ENST00000465282 HSCBQ8IWL3 235 aa19.34■□□□□ 0.69
USP39-211ENST00000465282 CRYGNQ8WXF5 182 aa19.34■□□□□ 0.69
USP39-211ENST00000465282 UPF3AQ9H1J1 476 aaKnown RBP19.34■□□□□ 0.69
USP39-211ENST00000465282 SMC3Q9UQE7 1217 aa19.34■□□□□ 0.69
USP39-211ENST00000465282 FIBPO43427 364 aa19.33■□□□□ 0.68
USP39-211ENST00000465282 RGS20O76081 388 aa19.33■□□□□ 0.68
USP39-211ENST00000465282 TXNP10599 105 aaKnown RBP19.33■□□□□ 0.68
USP39-211ENST00000465282 SMPD1P17405 629 aa19.33■□□□□ 0.68
USP39-211ENST00000465282 EN2P19622 333 aaPredicted RBP19.33■□□□□ 0.68
USP39-211ENST00000465282 KRT2P35908 639 aa19.33■□□□□ 0.68
USP39-211ENST00000465282 USP11P51784 963 aa19.33■□□□□ 0.68
USP39-211ENST00000465282 SOX10P56693 466 aa19.33■□□□□ 0.68
USP39-211ENST00000465282 ARHGAP4P98171 946 aa19.33■□□□□ 0.68
USP39-211ENST00000465282 KRT40Q6A162 431 aa19.33■□□□□ 0.68
USP39-211ENST00000465282 NIPA1Q7RTP0 329 aa19.33■□□□□ 0.68
USP39-211ENST00000465282 FBXO18Q8NFZ0 1043 aa19.33■□□□□ 0.68
USP39-211ENST00000465282 GPRASP2Q96D09 838 aa19.33■□□□□ 0.68
USP39-211ENST00000465282 AP5M1Q9H0R1 490 aa19.33■□□□□ 0.68
USP39-211ENST00000465282 UBIAD1Q9Y5Z9 338 aa19.33■□□□□ 0.68
USP39-211ENST00000465282 MRVI1Q9Y6F6 885 aa19.33■□□□□ 0.68
USP39-211ENST00000465282 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.32■□□□□ 0.68
USP39-211ENST00000465282 SPATA31C2B4DYI2 1134 aa19.32■□□□□ 0.68
USP39-211ENST00000465282 DNM1LO00429 736 aa19.32■□□□□ 0.68
USP39-211ENST00000465282 ADCY6O43306 1168 aa19.32■□□□□ 0.68
USP39-211ENST00000465282 DTNBO60941 627 aa19.32■□□□□ 0.68
USP39-211ENST00000465282 CST5P28325 142 aaPredicted RBP19.32■□□□□ 0.68
USP39-211ENST00000465282 ANO1Q5XXA6 986 aa19.32■□□□□ 0.68
USP39-211ENST00000465282 TLK2Q86UE8 772 aa19.32■□□□□ 0.68
USP39-211ENST00000465282 GIMAP8Q8ND71 665 aaPredicted RBP19.32■□□□□ 0.68
USP39-211ENST00000465282 SENP7Q9BQF6 1050 aa19.32■□□□□ 0.68
USP39-211ENST00000465282 TSEN34Q9BSV6 310 aaKnown RBP19.32■□□□□ 0.68
USP39-211ENST00000465282 JADE2Q9NQC1 790 aa19.32■□□□□ 0.68
USP39-211ENST00000465282 GJB4Q9NTQ9 266 aa19.32■□□□□ 0.68
USP39-211ENST00000465282 DDX41Q9UJV9 622 aaKnown RBP19.32■□□□□ 0.68
USP39-211ENST00000465282 SYNRGQ9UMZ2 1314 aa19.31■□□□□ 0.68
USP39-211ENST00000465282 CCDC194A0A1B0GVG4 234 aa19.31■□□□□ 0.68
USP39-211ENST00000465282 ADAMTS3O15072 1205 aa19.31■□□□□ 0.68
USP39-211ENST00000465282 ADAMTS4O75173 837 aa19.31■□□□□ 0.68
USP39-211ENST00000465282 CIITAP33076 1130 aa19.31■□□□□ 0.68
USP39-211ENST00000465282 ZNF76P36508 570 aa19.31■□□□□ 0.68
USP39-211ENST00000465282 NONOQ15233 471 aaKnown RBP eCLIP19.31■□□□□ 0.68
USP39-211ENST00000465282 CEP55Q53EZ4 464 aa19.31■□□□□ 0.68
USP39-211ENST00000465282 BRDTQ58F21 947 aaPredicted RBP19.31■□□□□ 0.68
USP39-211ENST00000465282 PCSK9Q8NBP7 692 aaKnown RBP19.31■□□□□ 0.68
USP39-211ENST00000465282 KLHDC9Q8NEP7 349 aa19.31■□□□□ 0.68
USP39-211ENST00000465282 RASGRP4Q8TDF6 673 aa19.31■□□□□ 0.68
USP39-211ENST00000465282 EMID1Q96A84 441 aaPredicted RBP19.31■□□□□ 0.68
USP39-211ENST00000465282 PGBD1Q96JS3 809 aa19.31■□□□□ 0.68
USP39-211ENST00000465282 MXRA8Q9BRK3 442 aa19.31■□□□□ 0.68
USP39-211ENST00000465282 RTEL1Q9NZ71 1219 aa19.31■□□□□ 0.68
USP39-211ENST00000465282 KBTBD13C9JR72 458 aa19.3■□□□□ 0.68
USP39-211ENST00000465282 MEIS1O00470 390 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms