RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 NEDD1Q8NHV4 660 aa17.76■□□□□ 0.43
HDAC6-214ENST00000465269 SP7Q8TDD2 431 aaPredicted RBP17.76■□□□□ 0.43
HDAC6-214ENST00000465269 OSBP2Q969R2 916 aa17.76■□□□□ 0.43
HDAC6-214ENST00000465269 OSBPL7Q9BZF2 842 aa17.76■□□□□ 0.43
HDAC6-214ENST00000465269 NSUN3Q9H649 340 aaKnown RBP17.76■□□□□ 0.43
HDAC6-214ENST00000465269 HDAC6Q9UBN7 1215 aa17.76■□□□□ 0.43
HDAC6-214ENST00000465269 CTNNA3Q9UI47 895 aa17.76■□□□□ 0.43
HDAC6-214ENST00000465269 FAM186AA6NE01 2351 aa17.75■□□□□ 0.43
HDAC6-214ENST00000465269 LINC01565O15544 149 aa17.75■□□□□ 0.43
HDAC6-214ENST00000465269 MBTPS2O43462 519 aa17.75■□□□□ 0.43
HDAC6-214ENST00000465269 KPNA6O60684 536 aa17.75■□□□□ 0.43
HDAC6-214ENST00000465269 LGR5O75473 907 aa17.75■□□□□ 0.43
HDAC6-214ENST00000465269 UPP2O95045 317 aa17.75■□□□□ 0.43
HDAC6-214ENST00000465269 ICAM1P05362 532 aa17.75■□□□□ 0.43
HDAC6-214ENST00000465269 MMP3P08254 477 aa17.75■□□□□ 0.43
HDAC6-214ENST00000465269 TDO2P48775 406 aa17.75■□□□□ 0.43
HDAC6-214ENST00000465269 VCPP55072 806 aaKnown RBP17.75■□□□□ 0.43
HDAC6-214ENST00000465269 HTRA4P83105 476 aaPredicted RBP17.75■□□□□ 0.43
HDAC6-214ENST00000465269 HIC1Q14526 733 aa17.75■□□□□ 0.43
HDAC6-214ENST00000465269 TRIM71Q2Q1W2 868 aaKnown RBP17.75■□□□□ 0.43
HDAC6-214ENST00000465269 TRIM67Q6ZTA4 783 aa17.75■□□□□ 0.43
HDAC6-214ENST00000465269 DBF4BQ8NFT6 615 aa17.75■□□□□ 0.43
HDAC6-214ENST00000465269 SCFD2Q8WU76 684 aa17.75■□□□□ 0.43
HDAC6-214ENST00000465269 KIF1BPQ96EK5 621 aa17.75■□□□□ 0.43
HDAC6-214ENST00000465269 ALG1Q9BT22 464 aa17.75■□□□□ 0.43
HDAC6-214ENST00000465269 INCENPQ9NQS7 918 aa17.75■□□□□ 0.43
HDAC6-214ENST00000465269 KMT2EQ8IZD2 1858 aa17.75■□□□□ 0.43
HDAC6-214ENST00000465269 HYAL1Q12794 435 aa17.74■□□□□ 0.43
HDAC6-214ENST00000465269 MKRN4PQ13434 485 aaPredicted RBP17.74■□□□□ 0.43
HDAC6-214ENST00000465269 LY6KQ17RY6 165 aa17.74■□□□□ 0.43
HDAC6-214ENST00000465269 RCSD1Q6JBY9 416 aa17.74■□□□□ 0.43
HDAC6-214ENST00000465269 TMEM192Q8IY95 271 aa17.74■□□□□ 0.43
HDAC6-214ENST00000465269 CLEC4DQ8WXI8 215 aa17.74■□□□□ 0.43
HDAC6-214ENST00000465269 IGFLR1Q9H665 355 aa17.74■□□□□ 0.43
HDAC6-214ENST00000465269 GVINP1Q7Z2Y8 2422 aa17.74■□□□□ 0.43
HDAC6-214ENST00000465269 PLIN4Q96Q06 1357 aa17.74■□□□□ 0.43
HDAC6-214ENST00000465269 STXBP3O00186 592 aa17.73■□□□□ 0.43
HDAC6-214ENST00000465269 NKRFO15226 690 aaKnown RBP eCLIP17.73■□□□□ 0.43
HDAC6-214ENST00000465269 TBX10O75333 385 aa17.73■□□□□ 0.43
HDAC6-214ENST00000465269 APPP05067 770 aa17.73■□□□□ 0.43
HDAC6-214ENST00000465269 RBL2Q08999 1139 aa17.73■□□□□ 0.43
HDAC6-214ENST00000465269 CCDC96Q2M329 555 aa17.73■□□□□ 0.43
HDAC6-214ENST00000465269 HSP90AB4PQ58FF6 505 aa17.73■□□□□ 0.43
HDAC6-214ENST00000465269 SESTD1Q86VW0 696 aa17.73■□□□□ 0.43
HDAC6-214ENST00000465269 GTF2IRD1Q9UHL9 959 aa17.73■□□□□ 0.43
HDAC6-214ENST00000465269 SYNPO2Q9UMS6 1093 aa17.73■□□□□ 0.43
HDAC6-214ENST00000465269 STX8Q9UNK0 236 aa17.73■□□□□ 0.43
HDAC6-214ENST00000465269 NLRC5Q86WI3 1866 aa17.72■□□□□ 0.43
HDAC6-214ENST00000465269 M0R2C6 588 aa17.72■□□□□ 0.43
HDAC6-214ENST00000465269 PLA2G6O60733 806 aa17.72■□□□□ 0.43
HDAC6-214ENST00000465269 AMHP03971 560 aa17.72■□□□□ 0.43
HDAC6-214ENST00000465269 ZNF286BP0CG31 522 aa17.72■□□□□ 0.43
HDAC6-214ENST00000465269 EDNRBP24530 442 aa17.72■□□□□ 0.43
HDAC6-214ENST00000465269 ARHGAP1Q07960 439 aa17.72■□□□□ 0.43
HDAC6-214ENST00000465269 CTC1Q2NKJ3 1217 aa17.72■□□□□ 0.43
HDAC6-214ENST00000465269 BMP8AQ7Z5Y6 402 aa17.72■□□□□ 0.43
HDAC6-214ENST00000465269 FBXO11Q86XK2 927 aa17.72■□□□□ 0.43
HDAC6-214ENST00000465269 SUGP1Q8IWZ8 645 aaKnown RBP17.72■□□□□ 0.43
HDAC6-214ENST00000465269 YME1L1Q96TA2 773 aa17.72■□□□□ 0.43
HDAC6-214ENST00000465269 RANBP17Q9H2T7 1088 aaKnown RBP17.72■□□□□ 0.43
HDAC6-214ENST00000465269 GRM6O15303 877 aa17.71■□□□□ 0.43
HDAC6-214ENST00000465269 GPAA1O43292 621 aa17.71■□□□□ 0.43
HDAC6-214ENST00000465269 EFCAB14O75071 495 aa17.71■□□□□ 0.43
HDAC6-214ENST00000465269 RGS20O76081 388 aa17.71■□□□□ 0.43
HDAC6-214ENST00000465269 RPS6P62753 249 aaKnown RBP17.71■□□□□ 0.43
HDAC6-214ENST00000465269 CCDC62Q6P9F0 684 aa17.71■□□□□ 0.43
HDAC6-214ENST00000465269 GIMAP6Q6P9H5 292 aa17.71■□□□□ 0.43
HDAC6-214ENST00000465269 RNF207Q6ZRF8 634 aa17.71■□□□□ 0.43
HDAC6-214ENST00000465269 SIRT2Q8IXJ6 389 aa17.71■□□□□ 0.43
HDAC6-214ENST00000465269 MIER1Q8N108 512 aa17.71■□□□□ 0.43
HDAC6-214ENST00000465269 C7orf31Q8N865 590 aa17.71■□□□□ 0.43
HDAC6-214ENST00000465269 PANK1Q8TE04 598 aa17.71■□□□□ 0.43
HDAC6-214ENST00000465269 ATOH1Q92858 354 aaPredicted RBP17.71■□□□□ 0.43
HDAC6-214ENST00000465269 IL17RBQ9NRM6 502 aa17.71■□□□□ 0.43
HDAC6-214ENST00000465269 PLXNA3P51805 1871 aa17.71■□□□□ 0.43
HDAC6-214ENST00000465269 DMXL1Q9Y485 3027 aa17.71■□□□□ 0.43
HDAC6-214ENST00000465269 FRMPD2Q68DX3 1309 aaPredicted RBP17.71■□□□□ 0.42
HDAC6-214ENST00000465269 COL4A6Q14031 1691 aa17.71■□□□□ 0.42
HDAC6-214ENST00000465269 EPG5Q9HCE0 2579 aa17.7■□□□□ 0.42
HDAC6-214ENST00000465269 H0Y858 1186 aa17.7■□□□□ 0.42
HDAC6-214ENST00000465269 SORBS3O60504 671 aa17.7■□□□□ 0.42
HDAC6-214ENST00000465269 PSEN2P49810 448 aa17.7■□□□□ 0.42
HDAC6-214ENST00000465269 ZSCAN25Q6NSZ9 544 aa17.7■□□□□ 0.42
HDAC6-214ENST00000465269 SEPT14Q6ZU15 432 aa17.7■□□□□ 0.42
HDAC6-214ENST00000465269 ASCL5Q7RTU5 278 aa17.7■□□□□ 0.42
HDAC6-214ENST00000465269 FBXL6Q8N531 539 aa17.7■□□□□ 0.42
HDAC6-214ENST00000465269 POP1Q99575 1024 aaKnown RBP17.7■□□□□ 0.42
HDAC6-214ENST00000465269 GPCPD1Q9NPB8 672 aa17.7■□□□□ 0.42
HDAC6-214ENST00000465269 TLR9Q9NR96 1032 aa17.7■□□□□ 0.42
HDAC6-214ENST00000465269 SMARCA5O60264 1052 aaPredicted RBP17.69■□□□□ 0.42
HDAC6-214ENST00000465269 PARNO95453 639 aaKnown RBP17.69■□□□□ 0.42
HDAC6-214ENST00000465269 CTNNB1P35222 781 aa17.69■□□□□ 0.42
HDAC6-214ENST00000465269 ZXDAP98168 799 aa17.69■□□□□ 0.42
HDAC6-214ENST00000465269 FOXK2Q01167 660 aa17.69■□□□□ 0.42
HDAC6-214ENST00000465269 PTK7Q13308 1070 aa17.69■□□□□ 0.42
HDAC6-214ENST00000465269 SMAD4Q13485 552 aaKnown RBP17.69■□□□□ 0.42
HDAC6-214ENST00000465269 SYDE2Q5VT97 1194 aa17.69■□□□□ 0.42
HDAC6-214ENST00000465269 IFNL3Q8IZI9 196 aa17.69■□□□□ 0.42
HDAC6-214ENST00000465269 SAMD11Q96NU1 681 aa17.69■□□□□ 0.42
HDAC6-214ENST00000465269 ZNF287Q9HBT7 754 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms